Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SNORA40.6-201ENST00000391153 128 ntBASIC1.66□□□□□ -2.14
PHOX2BQ99453 SNORD124-201ENST00000459577 104 ntBASIC1.66□□□□□ -2.14
PHOX2BQ99453 AL353770.2-201ENST00000620024 78 ntBASIC1.66□□□□□ -2.14
PHOX2BQ99453 MIR6828-201ENST00000636181 60 ntBASIC1.66□□□□□ -2.14
PHOX2BQ99453 RNU6-669P-201ENST00000365575 107 ntBASIC1.65□□□□□ -2.15
PHOX2BQ99453 MIR203A-201ENST00000384836 110 ntBASIC1.65□□□□□ -2.15
PHOX2BQ99453 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.65□□□□□ -2.15
PHOX2BQ99453 RNU6-982P-201ENST00000516216 102 ntBASIC1.65□□□□□ -2.15
PHOX2BQ99453 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
PHOX2BQ99453 SNORD42B-201ENST00000458893 67 ntBASIC1.64□□□□□ -2.15
PHOX2BQ99453 RNA5SP255-201ENST00000516370 107 ntBASIC1.64□□□□□ -2.15
PHOX2BQ99453 RN7SL793P-201ENST00000583259 296 ntBASIC1.64□□□□□ -2.15
PHOX2BQ99453 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
PHOX2BQ99453 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
PHOX2BQ99453 RNU6-645P-201ENST00000364649 106 ntBASIC1.62□□□□□ -2.15
PHOX2BQ99453 RNU6-269P-201ENST00000391077 97 ntBASIC1.62□□□□□ -2.15
PHOX2BQ99453 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
PHOX2BQ99453 RNA5SP404-201ENST00000517118 132 ntBASIC1.62□□□□□ -2.15
PHOX2BQ99453 AL162376.1-201ENST00000624117 175 ntBASIC1.62□□□□□ -2.15
PHOX2BQ99453 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PHOX2BQ99453 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
PHOX2BQ99453 SNORA67.6-201ENST00000391093 99 ntBASIC1.61□□□□□ -2.15
PHOX2BQ99453 RNA5SP227-201ENST00000516184 113 ntBASIC1.61□□□□□ -2.15
PHOX2BQ99453 RNA5SP215-201ENST00000363440 122 ntBASIC1.6□□□□□ -2.15
PHOX2BQ99453 RNU6-1187P-201ENST00000364771 110 ntBASIC1.6□□□□□ -2.15
PHOX2BQ99453 Y_RNA.375-201ENST00000365625 101 ntBASIC1.6□□□□□ -2.15
PHOX2BQ99453 AC110620.1-201ENST00000416042 228 ntBASIC1.6□□□□□ -2.15
PHOX2BQ99453 HAR1A.1-201ENST00000459583 118 ntBASIC1.6□□□□□ -2.15
PHOX2BQ99453 AC018659.1-201ENST00000551083 169 ntBASIC1.6□□□□□ -2.15
PHOX2BQ99453 MIR6739-201ENST00000622461 75 ntBASIC1.6□□□□□ -2.15
PHOX2BQ99453 RNU6-1162P-201ENST00000384443 104 ntBASIC1.59□□□□□ -2.15
PHOX2BQ99453 AL354695.1-201ENST00000427935 228 ntBASIC1.59□□□□□ -2.15
PHOX2BQ99453 MIR6078-201ENST00000611069 100 ntBASIC1.59□□□□□ -2.15
PHOX2BQ99453 RNU6-499P-201ENST00000365615 107 ntBASIC1.58□□□□□ -2.16
PHOX2BQ99453 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
PHOX2BQ99453 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
PHOX2BQ99453 MIR18A-201ENST00000362310 71 ntBASIC1.57□□□□□ -2.16
PHOX2BQ99453 MIR9-2-201ENST00000384838 87 ntBASIC1.57□□□□□ -2.16
PHOX2BQ99453 MIR6767-201ENST00000637302 66 ntBASIC1.57□□□□□ -2.16
PHOX2BQ99453 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
PHOX2BQ99453 RNA5SP484-201ENST00000458857 111 ntBASIC1.56□□□□□ -2.16
PHOX2BQ99453 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.56□□□□□ -2.16
PHOX2BQ99453 AC011195.1-201ENST00000578177 177 ntBASIC1.56□□□□□ -2.16
PHOX2BQ99453 RNU6-302P-201ENST00000365249 107 ntBASIC1.55□□□□□ -2.16
PHOX2BQ99453 RNU6-1335P-201ENST00000365426 107 ntBASIC1.55□□□□□ -2.16
PHOX2BQ99453 SNORD99-201ENST00000408612 74 ntBASIC1.55□□□□□ -2.16
PHOX2BQ99453 MIR26B-201ENST00000362251 77 ntBASIC1.54□□□□□ -2.16
PHOX2BQ99453 MIR216A-201ENST00000385063 110 ntBASIC1.54□□□□□ -2.16
PHOX2BQ99453 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.54□□□□□ -2.16
PHOX2BQ99453 RNA5SP268-201ENST00000516828 124 ntBASIC1.54□□□□□ -2.16
PHOX2BQ99453 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.54□□□□□ -2.16
PHOX2BQ99453 Y_RNA.407-201ENST00000383986 113 ntBASIC1.53□□□□□ -2.16
PHOX2BQ99453 SNORA15B-2-201ENST00000384058 135 ntBASIC1.53□□□□□ -2.16
PHOX2BQ99453 SNORA15B-1-201ENST00000384334 135 ntBASIC1.53□□□□□ -2.16
PHOX2BQ99453 RNU5B-6P-201ENST00000516765 68 ntBASIC1.53□□□□□ -2.16
PHOX2BQ99453 RNU6-990P-201ENST00000364385 104 ntBASIC1.52□□□□□ -2.17
PHOX2BQ99453 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
PHOX2BQ99453 MIR521-2-201ENST00000384818 87 ntBASIC1.51□□□□□ -2.17
PHOX2BQ99453 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.51□□□□□ -2.17
PHOX2BQ99453 AC006210.1-201ENST00000424882 111 ntBASIC1.51□□□□□ -2.17
PHOX2BQ99453 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.51□□□□□ -2.17
PHOX2BQ99453 RNA5SP147-201ENST00000516493 109 ntBASIC1.51□□□□□ -2.17
PHOX2BQ99453 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.51□□□□□ -2.17
PHOX2BQ99453 RNA5SP457-201ENST00000363657 124 ntBASIC1.5□□□□□ -2.17
PHOX2BQ99453 RNU6-656P-201ENST00000516785 107 ntBASIC1.5□□□□□ -2.17
PHOX2BQ99453 MIR517C-201ENST00000385103 95 ntBASIC1.49□□□□□ -2.17
PHOX2BQ99453 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
PHOX2BQ99453 SNORD110-201ENST00000408189 75 ntBASIC1.49□□□□□ -2.17
PHOX2BQ99453 SCARNA17.3-201ENST00000516381 125 ntBASIC1.49□□□□□ -2.17
PHOX2BQ99453 Y_RNA.115-201ENST00000363272 98 ntBASIC1.48□□□□□ -2.17
PHOX2BQ99453 RNU6-940P-201ENST00000363433 104 ntBASIC1.48□□□□□ -2.17
PHOX2BQ99453 MTND4LP19-201ENST00000403051 166 ntBASIC1.48□□□□□ -2.17
PHOX2BQ99453 RNU6-1089P-201ENST00000516473 104 ntBASIC1.48□□□□□ -2.17
PHOX2BQ99453 RNA5SP94-201ENST00000516917 108 ntBASIC1.48□□□□□ -2.17
PHOX2BQ99453 AL109933.3-201ENST00000619095 188 ntBASIC1.48□□□□□ -2.17
PHOX2BQ99453 uc_338.10-201ENST00000621872 182 ntBASIC1.48□□□□□ -2.17
PHOX2BQ99453 MIR5000-201ENST00000577717 103 ntBASIC1.47□□□□□ -2.17
PHOX2BQ99453 MIR4661-201ENST00000582720 75 ntBASIC1.47□□□□□ -2.17
PHOX2BQ99453 AC092634.7-201ENST00000621022 103 ntBASIC1.47□□□□□ -2.17
PHOX2BQ99453 SCARNA21.1-201ENST00000515996 128 ntBASIC1.46□□□□□ -2.18
PHOX2BQ99453 SNORA36.1-201ENST00000363424 132 ntBASIC1.45□□□□□ -2.18
PHOX2BQ99453 SNORA25.5-201ENST00000363782 126 ntBASIC1.45□□□□□ -2.18
PHOX2BQ99453 SNORA40.17-201ENST00000517256 115 ntBASIC1.45□□□□□ -2.18
PHOX2BQ99453 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
PHOX2BQ99453 RNA5SP299-201ENST00000391203 116 ntBASIC1.44□□□□□ -2.18
PHOX2BQ99453 AC021146.9-201ENST00000512503 156 ntBASIC1.44□□□□□ -2.18
PHOX2BQ99453 MIR5706-201ENST00000579841 80 ntBASIC1.44□□□□□ -2.18
PHOX2BQ99453 AL353765.1-201ENST00000605514 183 ntBASIC1.44□□□□□ -2.18
PHOX2BQ99453 SNORA63.6-201ENST00000364921 119 ntBASIC1.43□□□□□ -2.18
PHOX2BQ99453 RNU6-939P-201ENST00000384634 107 ntBASIC1.43□□□□□ -2.18
PHOX2BQ99453 MIR193B-201ENST00000384907 83 ntBASIC1.43□□□□□ -2.18
PHOX2BQ99453 RNA5SP222-201ENST00000411039 105 ntBASIC1.43□□□□□ -2.18
PHOX2BQ99453 MIR1273G-201ENST00000577677 100 ntBASIC1.43□□□□□ -2.18
PHOX2BQ99453 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.43□□□□□ -2.18
PHOX2BQ99453 MIR7107-201ENST00000611489 80 ntBASIC1.42□□□□□ -2.18
PHOX2BQ99453 RNA5SP62-201ENST00000363457 110 ntBASIC1.41□□□□□ -2.18
PHOX2BQ99453 RNU6-987P-201ENST00000384759 104 ntBASIC1.41□□□□□ -2.18
PHOX2BQ99453 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
PHOX2BQ99453 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
PHOX2BQ99453 MIR652-201ENST00000385278 98 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 242.4 ms