Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 RNU6-469P-201ENST00000516253 101 ntBASIC0.95□□□□□ -2.26
CLIP3Q96DZ5 SCARNA16.5-201ENST00000517114 183 ntBASIC0.95□□□□□ -2.26
CLIP3Q96DZ5 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
CLIP3Q96DZ5 RNU1-141P-201ENST00000364623 158 ntBASIC0.94□□□□□ -2.26
CLIP3Q96DZ5 RNU6-716P-201ENST00000365621 103 ntBASIC0.94□□□□□ -2.26
CLIP3Q96DZ5 RNU6-895P-201ENST00000384125 103 ntBASIC0.94□□□□□ -2.26
CLIP3Q96DZ5 RNU6-630P-201ENST00000391258 106 ntBASIC0.94□□□□□ -2.26
CLIP3Q96DZ5 RNU6-982P-201ENST00000516216 102 ntBASIC0.94□□□□□ -2.26
CLIP3Q96DZ5 RNU6-1216P-201ENST00000362590 107 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 Y_RNA.443-201ENST00000384135 111 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 MIR203A-201ENST00000384836 110 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 snoU13.18-201ENST00000459483 104 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 MIR3657-201ENST00000584818 117 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 MIR4653-201ENST00000585107 83 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 MIR6509-201ENST00000614603 85 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 AL162376.1-201ENST00000624117 175 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 MIR6767-201ENST00000637302 66 ntBASIC0.93□□□□□ -2.26
CLIP3Q96DZ5 MIR18A-201ENST00000362310 71 ntBASIC0.92□□□□□ -2.26
CLIP3Q96DZ5 SNORA36.1-201ENST00000363424 132 ntBASIC0.92□□□□□ -2.26
CLIP3Q96DZ5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.92□□□□□ -2.26
CLIP3Q96DZ5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CLIP3Q96DZ5 SNORA8.2-201ENST00000384372 139 ntBASIC0.91□□□□□ -2.26
CLIP3Q96DZ5 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
CLIP3Q96DZ5 MIR548L-201ENST00000408303 86 ntBASIC0.91□□□□□ -2.26
CLIP3Q96DZ5 MIR4460-201ENST00000577862 86 ntBASIC0.91□□□□□ -2.26
CLIP3Q96DZ5 AL109933.3-201ENST00000619095 188 ntBASIC0.91□□□□□ -2.26
CLIP3Q96DZ5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CLIP3Q96DZ5 SNORA25.4-201ENST00000363666 124 ntBASIC0.9□□□□□ -2.27
CLIP3Q96DZ5 RNU6-990P-201ENST00000364385 104 ntBASIC0.9□□□□□ -2.27
CLIP3Q96DZ5 RNA5SP484-201ENST00000458857 111 ntBASIC0.9□□□□□ -2.27
CLIP3Q96DZ5 AC018659.1-201ENST00000551083 169 ntBASIC0.9□□□□□ -2.27
CLIP3Q96DZ5 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
CLIP3Q96DZ5 AC073869.9-201ENST00000641610 120 ntBASIC0.9□□□□□ -2.27
CLIP3Q96DZ5 RNU6-260P-201ENST00000384092 107 ntBASIC0.89□□□□□ -2.27
CLIP3Q96DZ5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.89□□□□□ -2.27
CLIP3Q96DZ5 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
CLIP3Q96DZ5 MIR7111-201ENST00000619751 72 ntBASIC0.89□□□□□ -2.27
CLIP3Q96DZ5 RNU4-45P-201ENST00000365469 141 ntBASIC0.88□□□□□ -2.27
CLIP3Q96DZ5 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
CLIP3Q96DZ5 MIR548J-201ENST00000408833 112 ntBASIC0.88□□□□□ -2.27
CLIP3Q96DZ5 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
CLIP3Q96DZ5 RNU5B-6P-201ENST00000516765 68 ntBASIC0.88□□□□□ -2.27
CLIP3Q96DZ5 MIR151B-201ENST00000584249 96 ntBASIC0.88□□□□□ -2.27
CLIP3Q96DZ5 RNA5SP94-201ENST00000516917 108 ntBASIC0.87□□□□□ -2.27
CLIP3Q96DZ5 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
CLIP3Q96DZ5 MIR4511-201ENST00000582784 87 ntBASIC0.87□□□□□ -2.27
CLIP3Q96DZ5 AC069503.3-201ENST00000618674 145 ntBASIC0.87□□□□□ -2.27
CLIP3Q96DZ5 SNORA2.1-201ENST00000363089 137 ntBASIC0.86□□□□□ -2.27
CLIP3Q96DZ5 MIR7-2-201ENST00000384970 110 ntBASIC0.86□□□□□ -2.27
CLIP3Q96DZ5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.86□□□□□ -2.27
CLIP3Q96DZ5 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
CLIP3Q96DZ5 MIR7107-201ENST00000611489 80 ntBASIC0.86□□□□□ -2.27
CLIP3Q96DZ5 MIR9-2-201ENST00000384838 87 ntBASIC0.85□□□□□ -2.27
CLIP3Q96DZ5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.85□□□□□ -2.27
CLIP3Q96DZ5 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
CLIP3Q96DZ5 RNU6-645P-201ENST00000364649 106 ntBASIC0.84□□□□□ -2.27
CLIP3Q96DZ5 MIR489-201ENST00000384923 84 ntBASIC0.84□□□□□ -2.27
CLIP3Q96DZ5 RNA5SP227-201ENST00000516184 113 ntBASIC0.84□□□□□ -2.27
CLIP3Q96DZ5 RNU6-656P-201ENST00000516785 107 ntBASIC0.84□□□□□ -2.27
CLIP3Q96DZ5 RNA5SP268-201ENST00000516828 124 ntBASIC0.84□□□□□ -2.27
CLIP3Q96DZ5 MIR6739-201ENST00000622461 75 ntBASIC0.84□□□□□ -2.27
CLIP3Q96DZ5 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
CLIP3Q96DZ5 RNA5SP147-201ENST00000516493 109 ntBASIC0.83□□□□□ -2.28
CLIP3Q96DZ5 RNU1-29P-201ENST00000606574 126 ntBASIC0.83□□□□□ -2.28
CLIP3Q96DZ5 AC103706.3-201ENST00000636297 85 ntBASIC0.83□□□□□ -2.28
CLIP3Q96DZ5 Y_RNA.375-201ENST00000365625 101 ntBASIC0.82□□□□□ -2.28
CLIP3Q96DZ5 RNY1P8-201ENST00000383970 114 ntBASIC0.82□□□□□ -2.28
CLIP3Q96DZ5 MIR548AE1-201ENST00000583292 70 ntBASIC0.82□□□□□ -2.28
CLIP3Q96DZ5 RNU6-668P-201ENST00000364180 107 ntBASIC0.81□□□□□ -2.28
CLIP3Q96DZ5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.81□□□□□ -2.28
CLIP3Q96DZ5 MTND4LP1-201ENST00000446263 157 ntBASIC0.81□□□□□ -2.28
CLIP3Q96DZ5 AC110620.1-201ENST00000416042 228 ntBASIC0.8□□□□□ -2.28
CLIP3Q96DZ5 CYP3A137P-201ENST00000562436 69 ntBASIC0.8□□□□□ -2.28
CLIP3Q96DZ5 SNORA70.25-201ENST00000612741 95 ntBASIC0.8□□□□□ -2.28
CLIP3Q96DZ5 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
CLIP3Q96DZ5 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
CLIP3Q96DZ5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.8□□□□□ -2.28
CLIP3Q96DZ5 SNORD114-4-201ENST00000363962 75 ntBASIC0.79□□□□□ -2.28
CLIP3Q96DZ5 RNU6-669P-201ENST00000365575 107 ntBASIC0.79□□□□□ -2.28
CLIP3Q96DZ5 MIR652-201ENST00000385278 98 ntBASIC0.79□□□□□ -2.28
CLIP3Q96DZ5 Y_RNA.633-201ENST00000459107 95 ntBASIC0.79□□□□□ -2.28
CLIP3Q96DZ5 MIR4752-201ENST00000579672 72 ntBASIC0.79□□□□□ -2.28
CLIP3Q96DZ5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 Y_RNA.250-201ENST00000364542 110 ntBASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 RNA5SP517-201ENST00000364724 117 ntBASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 MIR582-201ENST00000365731 98 ntBASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 Y_RNA.407-201ENST00000383986 113 ntBASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 MIR140-201ENST00000385282 100 ntBASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 SNORD110-201ENST00000408189 75 ntBASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 snoU13.13-201ENST00000458842 104 ntBASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 SCARNA17.3-201ENST00000516381 125 ntBASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 MIR5000-201ENST00000577717 103 ntBASIC0.78□□□□□ -2.28
CLIP3Q96DZ5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
CLIP3Q96DZ5 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
CLIP3Q96DZ5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
CLIP3Q96DZ5 AC006210.1-201ENST00000424882 111 ntBASIC0.77□□□□□ -2.29
CLIP3Q96DZ5 AL590095.2-201ENST00000604136 117 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms