Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 SNORD105-201ENST00000386910 85 ntBASIC1.26□□□□□ -2.21
SHISA4Q96DD7 RNU7-74P-201ENST00000459104 62 ntBASIC1.26□□□□□ -2.21
SHISA4Q96DD7 MIR1273G-201ENST00000577677 100 ntBASIC1.26□□□□□ -2.21
SHISA4Q96DD7 MIR548AG2-201ENST00000581228 64 ntBASIC1.26□□□□□ -2.21
SHISA4Q96DD7 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
SHISA4Q96DD7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SHISA4Q96DD7 AC244098.3-201ENST00000424803 96 ntBASIC1.25□□□□□ -2.21
SHISA4Q96DD7 MIR4639-201ENST00000584938 69 ntBASIC1.25□□□□□ -2.21
SHISA4Q96DD7 SNORD114-21-201ENST00000606412 72 ntBASIC1.25□□□□□ -2.21
SHISA4Q96DD7 AC092634.7-201ENST00000621022 103 ntBASIC1.25□□□□□ -2.21
SHISA4Q96DD7 RNU6-1079P-201ENST00000362861 110 ntBASIC1.24□□□□□ -2.21
SHISA4Q96DD7 MIR644A-201ENST00000385262 94 ntBASIC1.24□□□□□ -2.21
SHISA4Q96DD7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.24□□□□□ -2.21
SHISA4Q96DD7 NAMPTP3-201ENST00000569273 224 ntBASIC1.24□□□□□ -2.21
SHISA4Q96DD7 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
SHISA4Q96DD7 MIR203A-201ENST00000384836 110 ntBASIC1.23□□□□□ -2.21
SHISA4Q96DD7 MIR200A-201ENST00000384875 90 ntBASIC1.23□□□□□ -2.21
SHISA4Q96DD7 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
SHISA4Q96DD7 RNU6-955P-201ENST00000410497 104 ntBASIC1.23□□□□□ -2.21
SHISA4Q96DD7 MIR3973-201ENST00000579824 107 ntBASIC1.23□□□□□ -2.21
SHISA4Q96DD7 SNORD113-4-201ENST00000364802 75 ntBASIC1.22□□□□□ -2.21
SHISA4Q96DD7 MIR548L-201ENST00000408303 86 ntBASIC1.22□□□□□ -2.21
SHISA4Q96DD7 SNORD75.2-201ENST00000408784 58 ntBASIC1.22□□□□□ -2.21
SHISA4Q96DD7 AL691482.2-201ENST00000457453 84 ntBASIC1.22□□□□□ -2.21
SHISA4Q96DD7 RNU7-24P-201ENST00000458867 62 ntBASIC1.22□□□□□ -2.21
SHISA4Q96DD7 SNORA40.17-201ENST00000517256 115 ntBASIC1.22□□□□□ -2.21
SHISA4Q96DD7 AC069503.3-201ENST00000618674 145 ntBASIC1.22□□□□□ -2.21
SHISA4Q96DD7 AC244669.1-204ENST00000621564 178 ntBASIC1.22□□□□□ -2.21
SHISA4Q96DD7 MIR7978-201ENST00000636158 59 ntBASIC1.22□□□□□ -2.21
SHISA4Q96DD7 RNU6-495P-201ENST00000362995 107 ntBASIC1.21□□□□□ -2.22
SHISA4Q96DD7 Y_RNA.115-201ENST00000363272 98 ntBASIC1.21□□□□□ -2.22
SHISA4Q96DD7 RNA5SP192-201ENST00000364404 120 ntBASIC1.21□□□□□ -2.22
SHISA4Q96DD7 RNU6-1039P-201ENST00000383931 107 ntBASIC1.21□□□□□ -2.22
SHISA4Q96DD7 SNORD28-201ENST00000384706 75 ntBASIC1.21□□□□□ -2.22
SHISA4Q96DD7 MIR519E-201ENST00000385075 84 ntBASIC1.21□□□□□ -2.22
SHISA4Q96DD7 AC025627.3-201ENST00000582078 182 ntBASIC1.21□□□□□ -2.22
SHISA4Q96DD7 AL590095.2-201ENST00000604136 117 ntBASIC1.21□□□□□ -2.22
SHISA4Q96DD7 MIR548O2-201ENST00000616090 70 ntBASIC1.2□□□□□ -2.22
SHISA4Q96DD7 Y_RNA.375-201ENST00000365625 101 ntBASIC1.19□□□□□ -2.22
SHISA4Q96DD7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SHISA4Q96DD7 SNORD41.1-201ENST00000391000 69 ntBASIC1.19□□□□□ -2.22
SHISA4Q96DD7 SNORD42B-201ENST00000458893 67 ntBASIC1.19□□□□□ -2.22
SHISA4Q96DD7 MIR466-201ENST00000580653 84 ntBASIC1.19□□□□□ -2.22
SHISA4Q96DD7 MIR573-201ENST00000384964 99 ntBASIC1.18□□□□□ -2.22
SHISA4Q96DD7 MIR6509-201ENST00000614603 85 ntBASIC1.18□□□□□ -2.22
SHISA4Q96DD7 SNORD18A-201ENST00000363753 72 ntBASIC1.17□□□□□ -2.22
SHISA4Q96DD7 SNORA25.5-201ENST00000363782 126 ntBASIC1.17□□□□□ -2.22
SHISA4Q96DD7 RNU4-38P-201ENST00000364472 129 ntBASIC1.17□□□□□ -2.22
SHISA4Q96DD7 RNU6-54P-201ENST00000365563 107 ntBASIC1.17□□□□□ -2.22
SHISA4Q96DD7 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
SHISA4Q96DD7 SNORD124-201ENST00000459577 104 ntBASIC1.17□□□□□ -2.22
SHISA4Q96DD7 MIR3678-201ENST00000578455 94 ntBASIC1.17□□□□□ -2.22
SHISA4Q96DD7 RNU6-668P-201ENST00000364180 107 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 RNU6-645P-201ENST00000364649 106 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 SNORD114-24-201ENST00000365029 72 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 RNU6-542P-201ENST00000516405 103 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 RNA5SP121-201ENST00000516537 101 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 RNA5SP330-201ENST00000517096 96 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 RNA5SP47-201ENST00000517230 109 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 MIR3612-201ENST00000579753 87 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 MIR4714-201ENST00000580728 77 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 MIR3657-201ENST00000584818 117 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 AC073869.9-201ENST00000641610 120 ntBASIC1.16□□□□□ -2.22
SHISA4Q96DD7 SNORA75.1-201ENST00000391130 148 ntBASIC1.15□□□□□ -2.23
SHISA4Q96DD7 RNA5SP476-201ENST00000516613 103 ntBASIC1.15□□□□□ -2.23
SHISA4Q96DD7 RNU6-656P-201ENST00000516785 107 ntBASIC1.15□□□□□ -2.23
SHISA4Q96DD7 MIR6857-201ENST00000613267 93 ntBASIC1.15□□□□□ -2.23
SHISA4Q96DD7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
SHISA4Q96DD7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
SHISA4Q96DD7 RNU6-990P-201ENST00000364385 104 ntBASIC1.14□□□□□ -2.23
SHISA4Q96DD7 RNU6-726P-201ENST00000364680 107 ntBASIC1.14□□□□□ -2.23
SHISA4Q96DD7 RNU6-260P-201ENST00000384092 107 ntBASIC1.14□□□□□ -2.23
SHISA4Q96DD7 RNU6V-201ENST00000384105 107 ntBASIC1.14□□□□□ -2.23
SHISA4Q96DD7 MIR532-201ENST00000385025 91 ntBASIC1.14□□□□□ -2.23
SHISA4Q96DD7 SCARNA21.1-201ENST00000515996 128 ntBASIC1.14□□□□□ -2.23
SHISA4Q96DD7 MIR4460-201ENST00000577862 86 ntBASIC1.14□□□□□ -2.23
SHISA4Q96DD7 RNA5SP299-201ENST00000391203 116 ntBASIC1.13□□□□□ -2.23
SHISA4Q96DD7 MTND4LP1-201ENST00000446263 157 ntBASIC1.13□□□□□ -2.23
SHISA4Q96DD7 MIR924-201ENST00000638017 53 ntBASIC1.13□□□□□ -2.23
SHISA4Q96DD7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SHISA4Q96DD7 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
SHISA4Q96DD7 RNU6-716P-201ENST00000365621 103 ntBASIC1.12□□□□□ -2.23
SHISA4Q96DD7 MT-TY-201ENST00000387409 66 ntBASIC1.12□□□□□ -2.23
SHISA4Q96DD7 RNA5SP147-201ENST00000516493 109 ntBASIC1.12□□□□□ -2.23
SHISA4Q96DD7 SCARNA16.5-201ENST00000517114 183 ntBASIC1.12□□□□□ -2.23
SHISA4Q96DD7 RNA5SP257-201ENST00000363023 116 ntBASIC1.11□□□□□ -2.23
SHISA4Q96DD7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SHISA4Q96DD7 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
SHISA4Q96DD7 MIR6513-201ENST00000621188 64 ntBASIC1.11□□□□□ -2.23
SHISA4Q96DD7 RNU6-940P-201ENST00000363433 104 ntBASIC1.1□□□□□ -2.23
SHISA4Q96DD7 RNU1-141P-201ENST00000364623 158 ntBASIC1.1□□□□□ -2.23
SHISA4Q96DD7 RNU6-1335P-201ENST00000365426 107 ntBASIC1.1□□□□□ -2.23
SHISA4Q96DD7 RNU6-936P-201ENST00000384005 107 ntBASIC1.1□□□□□ -2.23
SHISA4Q96DD7 SNORA8.2-201ENST00000384372 139 ntBASIC1.1□□□□□ -2.23
SHISA4Q96DD7 RNA5SP255-201ENST00000516370 107 ntBASIC1.1□□□□□ -2.23
SHISA4Q96DD7 SNORD114-4-201ENST00000363962 75 ntBASIC1.09□□□□□ -2.23
SHISA4Q96DD7 RNU4-45P-201ENST00000365469 141 ntBASIC1.09□□□□□ -2.23
SHISA4Q96DD7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.09□□□□□ -2.23
SHISA4Q96DD7 RNU6-1089P-201ENST00000516473 104 ntBASIC1.09□□□□□ -2.23
SHISA4Q96DD7 Y_RNA.722-201ENST00000517279 114 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms