Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU6-645P-201ENST00000364649 106 ntBASIC-1□□□□□ -2.57
TTC28Q96AY4 RNU6-80P-201ENST00000384195 107 ntBASIC-1□□□□□ -2.57
TTC28Q96AY4 RNU6-937P-201ENST00000384325 106 ntBASIC-1□□□□□ -2.57
TTC28Q96AY4 MT-TW-201ENST00000387382 68 ntBASIC-1□□□□□ -2.57
TTC28Q96AY4 Y_RNA.584-201ENST00000391090 114 ntBASIC-1□□□□□ -2.57
TTC28Q96AY4 MTND4P17-201ENST00000470444 350 ntBASIC-1□□□□□ -2.57
TTC28Q96AY4 SCARNA24.2-201ENST00000516968 130 ntBASIC-1□□□□□ -2.57
TTC28Q96AY4 RNU2-4P-201ENST00000606190 192 ntBASIC-1□□□□□ -2.57
TTC28Q96AY4 RNU4-90P-201ENST00000362773 141 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 AC113139.1-201ENST00000605049 239 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 AC084781.2-201ENST00000615568 161 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 SNORD115-22-201ENST00000364456 82 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 MIR3657-201ENST00000584818 117 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 MIR548O2-201ENST00000616090 70 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 MIR5683-201ENST00000636514 76 ntBASIC-1.01□□□□□ -2.57
TTC28Q96AY4 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.02□□□□□ -2.57
TTC28Q96AY4 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.02□□□□□ -2.57
TTC28Q96AY4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
TTC28Q96AY4 RNU6-892P-201ENST00000410335 99 ntBASIC-1.02□□□□□ -2.57
TTC28Q96AY4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.02□□□□□ -2.57
TTC28Q96AY4 AL138825.1-201ENST00000618587 192 ntBASIC-1.02□□□□□ -2.57
TTC28Q96AY4 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 RNU6-788P-201ENST00000390967 104 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 AC138393.2-201ENST00000414742 246 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 UBE2WP1-201ENST00000362030 340 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 SNORD116-6-201ENST00000384711 96 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 MIR521-2-201ENST00000384818 87 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 AC082651.2-201ENST00000496833 166 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 RNU6-521P-201ENST00000516663 105 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 AC037487.3-201ENST00000606668 112 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.03□□□□□ -2.57
TTC28Q96AY4 RNU6-103P-201ENST00000363686 107 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 MIR520D-201ENST00000385002 87 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 RNU7-154P-201ENST00000516194 62 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 RNU6-65P-201ENST00000516332 98 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 AC103591.3-201ENST00000608684 209 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 MIR6509-201ENST00000614603 85 ntBASIC-1.04□□□□□ -2.58
TTC28Q96AY4 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 RNU6-662P-201ENST00000384253 104 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 RNU6-696P-201ENST00000390834 107 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 MIR1254-1-201ENST00000408257 97 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 SNORA40.14-201ENST00000516543 86 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 AL513043.2-201ENST00000573941 143 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 AL512310.12-203ENST00000640543 90 ntBASIC-1.05□□□□□ -2.58
TTC28Q96AY4 RNU6-508P-201ENST00000363231 103 ntBASIC-1.06□□□□□ -2.58
TTC28Q96AY4 SNORD113-8-201ENST00000363497 74 ntBASIC-1.06□□□□□ -2.58
TTC28Q96AY4 MIR34C-201ENST00000384831 77 ntBASIC-1.06□□□□□ -2.58
TTC28Q96AY4 MIR548U-201ENST00000390728 81 ntBASIC-1.06□□□□□ -2.58
TTC28Q96AY4 RNU4-43P-201ENST00000410628 137 ntBASIC-1.06□□□□□ -2.58
TTC28Q96AY4 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.06□□□□□ -2.58
TTC28Q96AY4 RNU6-651P-201ENST00000411040 105 ntBASIC-1.06□□□□□ -2.58
TTC28Q96AY4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.06□□□□□ -2.58
TTC28Q96AY4 RNU6-62P-201ENST00000516526 102 ntBASIC-1.06□□□□□ -2.58
TTC28Q96AY4 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.07□□□□□ -2.58
TTC28Q96AY4 RNU6-978P-201ENST00000364371 103 ntBASIC-1.07□□□□□ -2.58
TTC28Q96AY4 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.07□□□□□ -2.58
TTC28Q96AY4 MIR548I1-201ENST00000408810 149 ntBASIC-1.07□□□□□ -2.58
TTC28Q96AY4 MIR1255B1-201ENST00000636325 63 ntBASIC-1.07□□□□□ -2.58
TTC28Q96AY4 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.07□□□□□ -2.58
TTC28Q96AY4 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.07□□□□□ -2.58
TTC28Q96AY4 SNORD116-29-201ENST00000384516 83 ntBASIC-1.07□□□□□ -2.58
TTC28Q96AY4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.07□□□□□ -2.58
TTC28Q96AY4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.07□□□□□ -2.58
TTC28Q96AY4 MIR548P-201ENST00000408336 84 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 SNORD116-25-201ENST00000516517 92 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 U6.96-201ENST00000636425 70 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 RNU6-382P-201ENST00000365181 106 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 RNA5SP292-201ENST00000390974 118 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 U3.27-201ENST00000391237 200 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 RNU6-976P-201ENST00000516086 111 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 SNORA20.3-201ENST00000516880 132 ntBASIC-1.08□□□□□ -2.58
TTC28Q96AY4 RNU6-363P-201ENST00000362895 105 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 MIR545-201ENST00000385085 106 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 MIR3170-201ENST00000582699 77 ntBASIC-1.09□□□□□ -2.58
TTC28Q96AY4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms