Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
PTCD2Q8WV60 SNORD116.2-201ENST00000391251 93 ntBASIC1.89□□□□□ -2.11
PTCD2Q8WV60 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
PTCD2Q8WV60 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
PTCD2Q8WV60 SNORD110-201ENST00000408189 75 ntBASIC1.88□□□□□ -2.11
PTCD2Q8WV60 RNU6-1053P-201ENST00000515930 101 ntBASIC1.88□□□□□ -2.11
PTCD2Q8WV60 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.88□□□□□ -2.11
PTCD2Q8WV60 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PTCD2Q8WV60 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
PTCD2Q8WV60 AL021921.1-201ENST00000442774 93 ntBASIC1.87□□□□□ -2.11
PTCD2Q8WV60 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
PTCD2Q8WV60 MIR4498-201ENST00000577599 66 ntBASIC1.87□□□□□ -2.11
PTCD2Q8WV60 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
PTCD2Q8WV60 MIR582-201ENST00000365731 98 ntBASIC1.86□□□□□ -2.11
PTCD2Q8WV60 MIR548E-201ENST00000408287 88 ntBASIC1.86□□□□□ -2.11
PTCD2Q8WV60 MIR3122-201ENST00000577243 73 ntBASIC1.86□□□□□ -2.11
PTCD2Q8WV60 MIR548AE1-201ENST00000583292 70 ntBASIC1.86□□□□□ -2.11
PTCD2Q8WV60 MIR583-201ENST00000384846 75 ntBASIC1.85□□□□□ -2.11
PTCD2Q8WV60 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.85□□□□□ -2.11
PTCD2Q8WV60 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PTCD2Q8WV60 RNU6-980P-201ENST00000516925 103 ntBASIC1.85□□□□□ -2.11
PTCD2Q8WV60 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.85□□□□□ -2.11
PTCD2Q8WV60 MIR6828-201ENST00000636181 60 ntBASIC1.85□□□□□ -2.11
PTCD2Q8WV60 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PTCD2Q8WV60 RNU6-1246P-201ENST00000391064 107 ntBASIC1.84□□□□□ -2.11
PTCD2Q8WV60 RNU6-518P-201ENST00000516056 96 ntBASIC1.84□□□□□ -2.11
PTCD2Q8WV60 RNA5SP327-201ENST00000362494 101 ntBASIC1.83□□□□□ -2.12
PTCD2Q8WV60 Y_RNA.74-201ENST00000362911 99 ntBASIC1.83□□□□□ -2.12
PTCD2Q8WV60 Y_RNA.164-201ENST00000363709 102 ntBASIC1.83□□□□□ -2.12
PTCD2Q8WV60 RNU4-33P-201ENST00000364316 85 ntBASIC1.83□□□□□ -2.12
PTCD2Q8WV60 Y_RNA.226-201ENST00000364337 114 ntBASIC1.83□□□□□ -2.12
PTCD2Q8WV60 AC025627.3-201ENST00000582078 182 ntBASIC1.83□□□□□ -2.12
PTCD2Q8WV60 MIR8081-201ENST00000611533 95 ntBASIC1.83□□□□□ -2.12
PTCD2Q8WV60 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PTCD2Q8WV60 MIR527-201ENST00000385244 85 ntBASIC1.82□□□□□ -2.12
PTCD2Q8WV60 MIR7110-201ENST00000612638 86 ntBASIC1.82□□□□□ -2.12
PTCD2Q8WV60 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.82□□□□□ -2.12
PTCD2Q8WV60 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PTCD2Q8WV60 SNORD116-16-201ENST00000384533 92 ntBASIC1.81□□□□□ -2.12
PTCD2Q8WV60 MIR1287-201ENST00000408492 90 ntBASIC1.81□□□□□ -2.12
PTCD2Q8WV60 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
PTCD2Q8WV60 MIR200A-201ENST00000384875 90 ntBASIC1.8□□□□□ -2.12
PTCD2Q8WV60 MIR516B1-201ENST00000385211 90 ntBASIC1.8□□□□□ -2.12
PTCD2Q8WV60 AC243829.6-201ENST00000612652 106 ntBASIC1.8□□□□□ -2.12
PTCD2Q8WV60 RNA5SP268-201ENST00000516828 124 ntBASIC1.79□□□□□ -2.12
PTCD2Q8WV60 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
PTCD2Q8WV60 RNU1-17P-201ENST00000363022 152 ntBASIC1.78□□□□□ -2.12
PTCD2Q8WV60 RNU6-35P-201ENST00000384530 107 ntBASIC1.78□□□□□ -2.12
PTCD2Q8WV60 RNU6-930P-201ENST00000390938 100 ntBASIC1.78□□□□□ -2.12
PTCD2Q8WV60 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
PTCD2Q8WV60 SNORA17.3-201ENST00000391159 129 ntBASIC1.77□□□□□ -2.13
PTCD2Q8WV60 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
PTCD2Q8WV60 snoU13.31-201ENST00000607291 104 ntBASIC1.77□□□□□ -2.13
PTCD2Q8WV60 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
PTCD2Q8WV60 MIR19B1-201ENST00000384829 87 ntBASIC1.76□□□□□ -2.13
PTCD2Q8WV60 SNORD124-201ENST00000459577 104 ntBASIC1.76□□□□□ -2.13
PTCD2Q8WV60 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.76□□□□□ -2.13
PTCD2Q8WV60 MIR1255B2-201ENST00000408618 67 ntBASIC1.75□□□□□ -2.13
PTCD2Q8WV60 SNORA40.16-201ENST00000517238 121 ntBASIC1.75□□□□□ -2.13
PTCD2Q8WV60 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
PTCD2Q8WV60 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PTCD2Q8WV60 MIR18A-201ENST00000362310 71 ntBASIC1.74□□□□□ -2.13
PTCD2Q8WV60 Y_RNA.282-201ENST00000364793 102 ntBASIC1.74□□□□□ -2.13
PTCD2Q8WV60 SNORD13-201ENST00000459299 104 ntBASIC1.74□□□□□ -2.13
PTCD2Q8WV60 AC011195.1-201ENST00000578177 177 ntBASIC1.74□□□□□ -2.13
PTCD2Q8WV60 MIR378A-201ENST00000362177 66 ntBASIC1.73□□□□□ -2.13
PTCD2Q8WV60 SNORA36.1-201ENST00000363424 132 ntBASIC1.73□□□□□ -2.13
PTCD2Q8WV60 MIR519A2-201ENST00000384990 87 ntBASIC1.73□□□□□ -2.13
PTCD2Q8WV60 MIR548X-201ENST00000580069 75 ntBASIC1.73□□□□□ -2.13
PTCD2Q8WV60 AC090617.8-201ENST00000623339 167 ntBASIC1.72□□□□□ -2.13
PTCD2Q8WV60 MIR20A-201ENST00000362279 71 ntBASIC1.71□□□□□ -2.14
PTCD2Q8WV60 RNA5SP190-201ENST00000365222 118 ntBASIC1.71□□□□□ -2.14
PTCD2Q8WV60 RNU4-45P-201ENST00000365469 141 ntBASIC1.71□□□□□ -2.14
PTCD2Q8WV60 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PTCD2Q8WV60 SNORA40B-201ENST00000385573 128 ntBASIC1.71□□□□□ -2.14
PTCD2Q8WV60 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.71□□□□□ -2.14
PTCD2Q8WV60 AC244090.1-201ENST00000441884 93 ntBASIC1.71□□□□□ -2.14
PTCD2Q8WV60 MIR7107-201ENST00000611489 80 ntBASIC1.71□□□□□ -2.14
PTCD2Q8WV60 MIR7111-201ENST00000619751 72 ntBASIC1.71□□□□□ -2.14
PTCD2Q8WV60 RNU6-246P-201ENST00000384702 107 ntBASIC1.7□□□□□ -2.14
PTCD2Q8WV60 MIR499A-201ENST00000384903 122 ntBASIC1.7□□□□□ -2.14
PTCD2Q8WV60 SNORA67.5-201ENST00000391036 107 ntBASIC1.7□□□□□ -2.14
PTCD2Q8WV60 SNORA25.15-201ENST00000516487 89 ntBASIC1.7□□□□□ -2.14
PTCD2Q8WV60 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
PTCD2Q8WV60 RNU6-810P-201ENST00000364001 107 ntBASIC1.69□□□□□ -2.14
PTCD2Q8WV60 SNORD2-201ENST00000459163 69 ntBASIC1.69□□□□□ -2.14
PTCD2Q8WV60 RNA5SP94-201ENST00000516917 108 ntBASIC1.69□□□□□ -2.14
PTCD2Q8WV60 SNORA70.25-201ENST00000612741 95 ntBASIC1.69□□□□□ -2.14
PTCD2Q8WV60 AC243829.3-201ENST00000622177 108 ntBASIC1.69□□□□□ -2.14
PTCD2Q8WV60 SNORD114-24-201ENST00000365029 72 ntBASIC1.68□□□□□ -2.14
PTCD2Q8WV60 SNORD99-201ENST00000408612 74 ntBASIC1.68□□□□□ -2.14
PTCD2Q8WV60 AC108667.1-201ENST00000428618 249 ntBASIC1.68□□□□□ -2.14
PTCD2Q8WV60 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
PTCD2Q8WV60 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
PTCD2Q8WV60 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
PTCD2Q8WV60 MIR429-201ENST00000362106 83 ntBASIC1.66□□□□□ -2.14
PTCD2Q8WV60 RNU6-172P-201ENST00000411000 93 ntBASIC1.66□□□□□ -2.14
PTCD2Q8WV60 RNA5SP255-201ENST00000516370 107 ntBASIC1.66□□□□□ -2.14
PTCD2Q8WV60 MIR4303-201ENST00000581299 66 ntBASIC1.66□□□□□ -2.14
PTCD2Q8WV60 RNU6-321P-201ENST00000410912 106 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 206.6 ms