Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU7-154P-201ENST00000516194 62 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-875P-201ENST00000516488 106 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 U6.106-201ENST00000636360 105 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 SNORA33.1-201ENST00000364957 130 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-474P-201ENST00000384243 107 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-768P-201ENST00000384683 107 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-713P-201ENST00000384761 107 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU7-123P-201ENST00000515911 60 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-75P-201ENST00000515944 104 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 MIR3123-201ENST00000583417 75 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-508P-201ENST00000363231 103 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 SNORD116-10-201ENST00000363791 102 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-460P-201ENST00000391158 108 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-718P-201ENST00000516166 105 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 AC068339.1-201ENST00000526965 141 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 MT-TI-201ENST00000387365 69 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 RNU2-51P-201ENST00000410708 197 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 MTATP6P29-201ENST00000415057 132 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 MIR3139-201ENST00000579145 76 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 AC025521.1-201ENST00000621624 286 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 RNU6-238P-201ENST00000363313 106 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 RNU6-770P-201ENST00000363929 105 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 AC018880.2-201ENST00000414265 201 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 MIR3064-201ENST00000581130 66 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 AC025166.1-201ENST00000612411 163 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 RNU6-876P-201ENST00000391295 104 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 MIR5009-201ENST00000578736 100 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 MIR4490-201ENST00000582647 84 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 MIR4282-201ENST00000583613 67 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 AC103810.7-201ENST00000607821 91 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 MIR3658-201ENST00000636291 56 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 RNU6-681P-201ENST00000364012 104 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 AC139792.2-201ENST00000624218 587 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 RNU6-832P-201ENST00000363319 107 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 RNU6-54P-201ENST00000365563 107 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 FGF7P7-201ENST00000514120 227 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 SNORD58A-201ENST00000383875 65 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 AC090616.4-201ENST00000448026 115 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.38□□□□□ -2.47
SYNE1Q8NF91 RNU6-230P-201ENST00000362457 104 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 SNORD37.2-201ENST00000391075 66 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 SNORD63.1-201ENST00000516178 80 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 SNORD115-37-201ENST00000363768 82 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 SNORD77.2-201ENST00000391045 68 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 MIR548H1-201ENST00000408610 102 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 AC072026.1-201ENST00000605023 201 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 FTX_4.1-201ENST00000616291 147 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 RNU6-957P-201ENST00000363652 99 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 RNU6-645P-201ENST00000364649 106 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 RNU6-121P-201ENST00000410525 99 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 RNU6-258P-201ENST00000390884 101 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 SNORA81.3-201ENST00000517283 198 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 MIR3613-201ENST00000579844 87 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 MIR8062-201ENST00000621515 85 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 U6.104-201ENST00000637979 90 ntBASIC-0.39□□□□□ -2.47
SYNE1Q8NF91 MIR487B-201ENST00000385021 84 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 AC104996.3-201ENST00000590718 94 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 SNORD19-201ENST00000391191 68 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 MIR5683-201ENST00000636514 76 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 MIR8485-201ENST00000401372 91 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 AL118496.2-201ENST00000448300 230 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 MIR4439-201ENST00000583746 80 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms