Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNU6-881P-201ENST00000516813 102 ntBASIC-1.16□□□□□ -2.6
CCDC89Q8N998 MIRLET7B-201ENST00000385140 83 ntBASIC-1.17□□□□□ -2.6
CCDC89Q8N998 RNU6-519P-201ENST00000410590 108 ntBASIC-1.17□□□□□ -2.6
CCDC89Q8N998 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.17□□□□□ -2.6
CCDC89Q8N998 RNU6-758P-201ENST00000516292 89 ntBASIC-1.17□□□□□ -2.6
CCDC89Q8N998 AC012531.4-201ENST00000616509 177 ntBASIC-1.17□□□□□ -2.6
CCDC89Q8N998 RNU6-905P-201ENST00000384434 107 ntBASIC-1.18□□□□□ -2.6
CCDC89Q8N998 RNU6-592P-201ENST00000411333 103 ntBASIC-1.18□□□□□ -2.6
CCDC89Q8N998 AP000533.3-201ENST00000447704 118 ntBASIC-1.19□□□□□ -2.6
CCDC89Q8N998 RNU6-255P-201ENST00000516957 105 ntBASIC-1.19□□□□□ -2.6
CCDC89Q8N998 AC108676.2-201ENST00000605225 163 ntBASIC-1.19□□□□□ -2.6
CCDC89Q8N998 RNA5SP368-201ENST00000364298 116 ntBASIC-1.2□□□□□ -2.6
CCDC89Q8N998 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.2□□□□□ -2.6
CCDC89Q8N998 MIR517B-201ENST00000385102 67 ntBASIC-1.2□□□□□ -2.6
CCDC89Q8N998 MIR548A3-201ENST00000385297 97 ntBASIC-1.2□□□□□ -2.6
CCDC89Q8N998 AC022137.1-201ENST00000483735 151 ntBASIC-1.2□□□□□ -2.6
CCDC89Q8N998 AC021146.9-201ENST00000512503 156 ntBASIC-1.2□□□□□ -2.6
CCDC89Q8N998 RNU4-36P-201ENST00000364294 144 ntBASIC-1.21□□□□□ -2.6
CCDC89Q8N998 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.21□□□□□ -2.6
CCDC89Q8N998 SNORD75.2-201ENST00000408784 58 ntBASIC-1.21□□□□□ -2.6
CCDC89Q8N998 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.21□□□□□ -2.6
CCDC89Q8N998 SNORA18.5-201ENST00000516616 101 ntBASIC-1.21□□□□□ -2.6
CCDC89Q8N998 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.21□□□□□ -2.6
CCDC89Q8N998 SNORD115-23-201ENST00000364461 82 ntBASIC-1.22□□□□□ -2.6
CCDC89Q8N998 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.22□□□□□ -2.6
CCDC89Q8N998 AC090425.1-201ENST00000610007 140 ntBASIC-1.22□□□□□ -2.6
CCDC89Q8N998 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.23□□□□□ -2.61
CCDC89Q8N998 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.23□□□□□ -2.61
CCDC89Q8N998 SNORA19.1-201ENST00000410656 129 ntBASIC-1.23□□□□□ -2.61
CCDC89Q8N998 Z95118.1-201ENST00000421372 247 ntBASIC-1.23□□□□□ -2.61
CCDC89Q8N998 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.24□□□□□ -2.61
CCDC89Q8N998 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.24□□□□□ -2.61
CCDC89Q8N998 RNU6-80P-201ENST00000384195 107 ntBASIC-1.24□□□□□ -2.61
CCDC89Q8N998 AC090617.8-201ENST00000623339 167 ntBASIC-1.24□□□□□ -2.61
CCDC89Q8N998 U6.96-201ENST00000636425 70 ntBASIC-1.24□□□□□ -2.61
CCDC89Q8N998 RNU4-32P-201ENST00000363404 141 ntBASIC-1.25□□□□□ -2.61
CCDC89Q8N998 SNORD114-25-201ENST00000363742 72 ntBASIC-1.25□□□□□ -2.61
CCDC89Q8N998 RNU6-382P-201ENST00000365181 106 ntBASIC-1.25□□□□□ -2.61
CCDC89Q8N998 RNU4-63P-201ENST00000411313 118 ntBASIC-1.25□□□□□ -2.61
CCDC89Q8N998 RNU7-24P-201ENST00000458867 62 ntBASIC-1.25□□□□□ -2.61
CCDC89Q8N998 RNU6-659P-201ENST00000516454 104 ntBASIC-1.25□□□□□ -2.61
CCDC89Q8N998 RNU6-62P-201ENST00000516526 102 ntBASIC-1.25□□□□□ -2.61
CCDC89Q8N998 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.25□□□□□ -2.61
CCDC89Q8N998 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.26□□□□□ -2.61
CCDC89Q8N998 RNY4P3-201ENST00000365254 95 ntBASIC-1.26□□□□□ -2.61
CCDC89Q8N998 MT-TQ-201ENST00000387372 72 ntBASIC-1.26□□□□□ -2.61
CCDC89Q8N998 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
CCDC89Q8N998 RNU6-907P-201ENST00000390924 102 ntBASIC-1.26□□□□□ -2.61
CCDC89Q8N998 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.26□□□□□ -2.61
CCDC89Q8N998 U6.95-201ENST00000636931 70 ntBASIC-1.26□□□□□ -2.61
CCDC89Q8N998 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.27□□□□□ -2.61
CCDC89Q8N998 MIR548I1-201ENST00000408810 149 ntBASIC-1.27□□□□□ -2.61
CCDC89Q8N998 MTATP6P29-201ENST00000415057 132 ntBASIC-1.27□□□□□ -2.61
CCDC89Q8N998 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.27□□□□□ -2.61
CCDC89Q8N998 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.27□□□□□ -2.61
CCDC89Q8N998 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.28□□□□□ -2.61
CCDC89Q8N998 SNORD74.6-201ENST00000364796 70 ntBASIC-1.28□□□□□ -2.61
CCDC89Q8N998 RNY1P5-201ENST00000383890 115 ntBASIC-1.28□□□□□ -2.61
CCDC89Q8N998 MIR203A-201ENST00000384836 110 ntBASIC-1.28□□□□□ -2.61
CCDC89Q8N998 RNA5SP147-201ENST00000516493 109 ntBASIC-1.28□□□□□ -2.61
CCDC89Q8N998 MIR4773-1-201ENST00000637203 78 ntBASIC-1.28□□□□□ -2.61
CCDC89Q8N998 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.29□□□□□ -2.62
CCDC89Q8N998 SNORD58A-201ENST00000383875 65 ntBASIC-1.29□□□□□ -2.62
CCDC89Q8N998 MIR124-2-201ENST00000385081 109 ntBASIC-1.29□□□□□ -2.62
CCDC89Q8N998 MIR1265-201ENST00000408444 86 ntBASIC-1.29□□□□□ -2.62
CCDC89Q8N998 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.29□□□□□ -2.62
CCDC89Q8N998 SNORD18.2-201ENST00000459604 70 ntBASIC-1.29□□□□□ -2.62
CCDC89Q8N998 RNU6-824P-201ENST00000363724 104 ntBASIC-1.3□□□□□ -2.62
CCDC89Q8N998 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
CCDC89Q8N998 snoU13.17-201ENST00000458802 104 ntBASIC-1.3□□□□□ -2.62
CCDC89Q8N998 RNU6-208P-201ENST00000362431 107 ntBASIC-1.31□□□□□ -2.62
CCDC89Q8N998 SCARNA23-201ENST00000516060 130 ntBASIC-1.31□□□□□ -2.62
CCDC89Q8N998 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.31□□□□□ -2.62
CCDC89Q8N998 AC026421.1-201ENST00000519101 163 ntBASIC-1.31□□□□□ -2.62
CCDC89Q8N998 YWHAEP3-201ENST00000582767 121 ntBASIC-1.31□□□□□ -2.62
CCDC89Q8N998 AC006254.2-201ENST00000603259 279 ntBASIC-1.31□□□□□ -2.62
CCDC89Q8N998 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.31□□□□□ -2.62
CCDC89Q8N998 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.32□□□□□ -2.62
CCDC89Q8N998 RNU6-260P-201ENST00000384092 107 ntBASIC-1.32□□□□□ -2.62
CCDC89Q8N998 MIR3681-201ENST00000580089 72 ntBASIC-1.32□□□□□ -2.62
CCDC89Q8N998 MIR196A1-201ENST00000388006 70 ntBASIC-1.33□□□□□ -2.62
CCDC89Q8N998 RNU6-887P-201ENST00000410660 100 ntBASIC-1.33□□□□□ -2.62
CCDC89Q8N998 RNU6-904P-201ENST00000516206 101 ntBASIC-1.33□□□□□ -2.62
CCDC89Q8N998 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.34□□□□□ -2.62
CCDC89Q8N998 SNORD95.1-201ENST00000364099 68 ntBASIC-1.34□□□□□ -2.62
CCDC89Q8N998 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.34□□□□□ -2.62
CCDC89Q8N998 RNY1P7-201ENST00000384743 110 ntBASIC-1.34□□□□□ -2.62
CCDC89Q8N998 RNU6-972P-201ENST00000391208 107 ntBASIC-1.34□□□□□ -2.62
CCDC89Q8N998 MIR6509-201ENST00000614603 85 ntBASIC-1.34□□□□□ -2.62
CCDC89Q8N998 RNU5F-1-201ENST00000362507 117 ntBASIC-1.35□□□□□ -2.63
CCDC89Q8N998 SNORD116-21-201ENST00000384507 92 ntBASIC-1.35□□□□□ -2.63
CCDC89Q8N998 RNU6-880P-201ENST00000384526 107 ntBASIC-1.35□□□□□ -2.63
CCDC89Q8N998 RNU6-35P-201ENST00000384530 107 ntBASIC-1.35□□□□□ -2.63
CCDC89Q8N998 AL353803.5-201ENST00000599815 141 ntBASIC-1.35□□□□□ -2.63
CCDC89Q8N998 SNORA33.1-201ENST00000364957 130 ntBASIC-1.36□□□□□ -2.63
CCDC89Q8N998 SNORA62.4-201ENST00000365504 151 ntBASIC-1.36□□□□□ -2.63
CCDC89Q8N998 RNU6-412P-201ENST00000516434 106 ntBASIC-1.37□□□□□ -2.63
CCDC89Q8N998 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.37□□□□□ -2.63
CCDC89Q8N998 snosnR66.1-201ENST00000391095 99 ntBASIC-1.38□□□□□ -2.63
CCDC89Q8N998 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 273.4 ms