Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
RNF135Q8IUD6 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
RNF135Q8IUD6 SNORD124-201ENST00000459577 104 ntBASIC1.62□□□□□ -2.15
RNF135Q8IUD6 RNU6-469P-201ENST00000516253 101 ntBASIC1.62□□□□□ -2.15
RNF135Q8IUD6 MIR4639-201ENST00000584938 69 ntBASIC1.62□□□□□ -2.15
RNF135Q8IUD6 AC244669.1-204ENST00000621564 178 ntBASIC1.62□□□□□ -2.15
RNF135Q8IUD6 RNU6-122P-201ENST00000516818 107 ntBASIC1.61□□□□□ -2.15
RNF135Q8IUD6 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
RNF135Q8IUD6 MIR4460-201ENST00000577862 86 ntBASIC1.61□□□□□ -2.15
RNF135Q8IUD6 MIR7978-201ENST00000636158 59 ntBASIC1.61□□□□□ -2.15
RNF135Q8IUD6 SNORD28-201ENST00000384706 75 ntBASIC1.6□□□□□ -2.15
RNF135Q8IUD6 Y_RNA.722-201ENST00000517279 114 ntBASIC1.6□□□□□ -2.15
RNF135Q8IUD6 MIR548V-201ENST00000584165 80 ntBASIC1.6□□□□□ -2.15
RNF135Q8IUD6 RNU6-92P-201ENST00000605893 104 ntBASIC1.6□□□□□ -2.15
RNF135Q8IUD6 RNU6-302P-201ENST00000365249 107 ntBASIC1.59□□□□□ -2.15
RNF135Q8IUD6 MIR548L-201ENST00000408303 86 ntBASIC1.59□□□□□ -2.15
RNF135Q8IUD6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.59□□□□□ -2.15
RNF135Q8IUD6 MIR3938-201ENST00000582157 103 ntBASIC1.59□□□□□ -2.15
RNF135Q8IUD6 MIR6078-201ENST00000611069 100 ntBASIC1.59□□□□□ -2.15
RNF135Q8IUD6 SNORA75.1-201ENST00000391130 148 ntBASIC1.58□□□□□ -2.16
RNF135Q8IUD6 AC018659.1-201ENST00000551083 169 ntBASIC1.58□□□□□ -2.16
RNF135Q8IUD6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.58□□□□□ -2.16
RNF135Q8IUD6 MIR573-201ENST00000384964 99 ntBASIC1.57□□□□□ -2.16
RNF135Q8IUD6 AL157398.1-201ENST00000452981 186 ntBASIC1.57□□□□□ -2.16
RNF135Q8IUD6 AC025627.3-201ENST00000582078 182 ntBASIC1.57□□□□□ -2.16
RNF135Q8IUD6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
RNF135Q8IUD6 Y_RNA.250-201ENST00000364542 110 ntBASIC1.56□□□□□ -2.16
RNF135Q8IUD6 RNU1-141P-201ENST00000364623 158 ntBASIC1.56□□□□□ -2.16
RNF135Q8IUD6 RNU6-726P-201ENST00000364680 107 ntBASIC1.56□□□□□ -2.16
RNF135Q8IUD6 SNORD113-4-201ENST00000364802 75 ntBASIC1.56□□□□□ -2.16
RNF135Q8IUD6 MIR598-201ENST00000384868 97 ntBASIC1.56□□□□□ -2.16
RNF135Q8IUD6 SNORD60.1-201ENST00000362451 73 ntBASIC1.55□□□□□ -2.16
RNF135Q8IUD6 RNU1-93P-201ENST00000364704 169 ntBASIC1.55□□□□□ -2.16
RNF135Q8IUD6 Y_RNA.374-201ENST00000365606 101 ntBASIC1.55□□□□□ -2.16
RNF135Q8IUD6 RNU6-1162P-201ENST00000384443 104 ntBASIC1.55□□□□□ -2.16
RNF135Q8IUD6 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
RNF135Q8IUD6 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
RNF135Q8IUD6 SNORD18A-201ENST00000363753 72 ntBASIC1.54□□□□□ -2.16
RNF135Q8IUD6 SNORD114-24-201ENST00000365029 72 ntBASIC1.54□□□□□ -2.16
RNF135Q8IUD6 RNU6-936P-201ENST00000384005 107 ntBASIC1.54□□□□□ -2.16
RNF135Q8IUD6 MIR548C-201ENST00000384815 97 ntBASIC1.54□□□□□ -2.16
RNF135Q8IUD6 MIR520E-201ENST00000384867 87 ntBASIC1.54□□□□□ -2.16
RNF135Q8IUD6 RNU6-808P-201ENST00000391233 108 ntBASIC1.54□□□□□ -2.16
RNF135Q8IUD6 RNA5SP404-201ENST00000517118 132 ntBASIC1.54□□□□□ -2.16
RNF135Q8IUD6 MIR3612-201ENST00000579753 87 ntBASIC1.54□□□□□ -2.16
RNF135Q8IUD6 RNU1-124P-201ENST00000363861 145 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 SNORD114-4-201ENST00000363962 75 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 RNU6-716P-201ENST00000365621 103 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 MIR521-2-201ENST00000384818 87 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 MIR630-201ENST00000384957 97 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
RNF135Q8IUD6 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 snoU13.13-201ENST00000458842 104 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 RPS29P1-201ENST00000465274 159 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 RNU5B-6P-201ENST00000516765 68 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 RNU6-1223P-201ENST00000517124 104 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 RNA5SP47-201ENST00000517230 109 ntBASIC1.53□□□□□ -2.16
RNF135Q8IUD6 MIR3678-201ENST00000578455 94 ntBASIC1.52□□□□□ -2.17
RNF135Q8IUD6 RNU6-269P-201ENST00000391077 97 ntBASIC1.51□□□□□ -2.17
RNF135Q8IUD6 RNA5SP255-201ENST00000516370 107 ntBASIC1.51□□□□□ -2.17
RNF135Q8IUD6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RNF135Q8IUD6 RNU6-1184P-201ENST00000384588 108 ntBASIC1.5□□□□□ -2.17
RNF135Q8IUD6 RNA5SP484-201ENST00000458857 111 ntBASIC1.5□□□□□ -2.17
RNF135Q8IUD6 SNORA8.2-201ENST00000384372 139 ntBASIC1.49□□□□□ -2.17
RNF135Q8IUD6 AC021146.9-201ENST00000512503 156 ntBASIC1.49□□□□□ -2.17
RNF135Q8IUD6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.49□□□□□ -2.17
RNF135Q8IUD6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
RNF135Q8IUD6 RNU4-45P-201ENST00000365469 141 ntBASIC1.48□□□□□ -2.17
RNF135Q8IUD6 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
RNF135Q8IUD6 MIR151B-201ENST00000584249 96 ntBASIC1.48□□□□□ -2.17
RNF135Q8IUD6 MIR6788-201ENST00000618842 66 ntBASIC1.48□□□□□ -2.17
RNF135Q8IUD6 SNORD114-27-201ENST00000363766 70 ntBASIC1.47□□□□□ -2.17
RNF135Q8IUD6 MIR517B-201ENST00000385102 67 ntBASIC1.47□□□□□ -2.17
RNF135Q8IUD6 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
RNF135Q8IUD6 SNORD113-2-201ENST00000391082 72 ntBASIC1.47□□□□□ -2.17
RNF135Q8IUD6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.47□□□□□ -2.17
RNF135Q8IUD6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.47□□□□□ -2.17
RNF135Q8IUD6 RNU7-174P-201ENST00000516248 59 ntBASIC1.47□□□□□ -2.17
RNF135Q8IUD6 U2.7-201ENST00000619197 100 ntBASIC1.47□□□□□ -2.17
RNF135Q8IUD6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
RNF135Q8IUD6 RNU6-698P-201ENST00000363523 107 ntBASIC1.46□□□□□ -2.18
RNF135Q8IUD6 RNU6-34P-201ENST00000364874 107 ntBASIC1.46□□□□□ -2.18
RNF135Q8IUD6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RNF135Q8IUD6 MIR548J-201ENST00000408833 112 ntBASIC1.46□□□□□ -2.18
RNF135Q8IUD6 SCARNA16.5-201ENST00000517114 183 ntBASIC1.46□□□□□ -2.18
RNF135Q8IUD6 SNORD99-201ENST00000408612 74 ntBASIC1.45□□□□□ -2.18
RNF135Q8IUD6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.45□□□□□ -2.18
RNF135Q8IUD6 SNORA33.1-201ENST00000364957 130 ntBASIC1.44□□□□□ -2.18
RNF135Q8IUD6 Y_RNA.633-201ENST00000459107 95 ntBASIC1.44□□□□□ -2.18
RNF135Q8IUD6 AC011195.1-201ENST00000578177 177 ntBASIC1.44□□□□□ -2.18
RNF135Q8IUD6 U4.4-201ENST00000620626 117 ntBASIC1.44□□□□□ -2.18
RNF135Q8IUD6 AL162376.1-201ENST00000624117 175 ntBASIC1.44□□□□□ -2.18
RNF135Q8IUD6 RNU6-1312P-201ENST00000362425 108 ntBASIC1.43□□□□□ -2.18
RNF135Q8IUD6 SNORA15B-2-201ENST00000384058 135 ntBASIC1.43□□□□□ -2.18
RNF135Q8IUD6 SNORA15B-1-201ENST00000384334 135 ntBASIC1.43□□□□□ -2.18
RNF135Q8IUD6 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
RNF135Q8IUD6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.43□□□□□ -2.18
RNF135Q8IUD6 uc_338.10-201ENST00000621872 182 ntBASIC1.43□□□□□ -2.18
RNF135Q8IUD6 Y_RNA.125-201ENST00000363371 111 ntBASIC1.42□□□□□ -2.18
RNF135Q8IUD6 SNORA63.6-201ENST00000364921 119 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms