Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 MIR548X-201ENST00000580069 75 ntBASIC1.8□□□□□ -2.12
LAPTM4BQ86VI4 MIR4769-201ENST00000584126 77 ntBASIC1.8□□□□□ -2.12
LAPTM4BQ86VI4 MIR6845-201ENST00000613182 61 ntBASIC1.8□□□□□ -2.12
LAPTM4BQ86VI4 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
LAPTM4BQ86VI4 MIR573-201ENST00000384964 99 ntBASIC1.79□□□□□ -2.12
LAPTM4BQ86VI4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LAPTM4BQ86VI4 FABP5P4-201ENST00000437203 171 ntBASIC1.79□□□□□ -2.12
LAPTM4BQ86VI4 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
LAPTM4BQ86VI4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.79□□□□□ -2.12
LAPTM4BQ86VI4 AC090617.8-201ENST00000623339 167 ntBASIC1.79□□□□□ -2.12
LAPTM4BQ86VI4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LAPTM4BQ86VI4 RNU6-810P-201ENST00000364001 107 ntBASIC1.78□□□□□ -2.12
LAPTM4BQ86VI4 Y_RNA.282-201ENST00000364793 102 ntBASIC1.78□□□□□ -2.12
LAPTM4BQ86VI4 MIR516B1-201ENST00000385211 90 ntBASIC1.78□□□□□ -2.12
LAPTM4BQ86VI4 SNORA26.9-201ENST00000391322 122 ntBASIC1.78□□□□□ -2.12
LAPTM4BQ86VI4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
LAPTM4BQ86VI4 SNORA40B-201ENST00000385573 128 ntBASIC1.77□□□□□ -2.13
LAPTM4BQ86VI4 MIR548F3-201ENST00000408509 87 ntBASIC1.77□□□□□ -2.13
LAPTM4BQ86VI4 MIR1255B2-201ENST00000408618 67 ntBASIC1.77□□□□□ -2.13
LAPTM4BQ86VI4 SNORA25-201ENST00000384384 134 ntBASIC1.76□□□□□ -2.13
LAPTM4BQ86VI4 AC243829.6-201ENST00000612652 106 ntBASIC1.76□□□□□ -2.13
LAPTM4BQ86VI4 RNA5SP99-201ENST00000364020 114 ntBASIC1.75□□□□□ -2.13
LAPTM4BQ86VI4 MIR519A2-201ENST00000384990 87 ntBASIC1.75□□□□□ -2.13
LAPTM4BQ86VI4 AL096840.1-201ENST00000603287 93 ntBASIC1.75□□□□□ -2.13
LAPTM4BQ86VI4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LAPTM4BQ86VI4 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
LAPTM4BQ86VI4 MIR545-201ENST00000385085 106 ntBASIC1.73□□□□□ -2.13
LAPTM4BQ86VI4 RNU6-172P-201ENST00000411000 93 ntBASIC1.73□□□□□ -2.13
LAPTM4BQ86VI4 MIR6828-201ENST00000636181 60 ntBASIC1.73□□□□□ -2.13
LAPTM4BQ86VI4 RNA5SP327-201ENST00000362494 101 ntBASIC1.72□□□□□ -2.13
LAPTM4BQ86VI4 RNU6-246P-201ENST00000384702 107 ntBASIC1.72□□□□□ -2.13
LAPTM4BQ86VI4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.72□□□□□ -2.13
LAPTM4BQ86VI4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.72□□□□□ -2.13
LAPTM4BQ86VI4 MIR8081-201ENST00000611533 95 ntBASIC1.72□□□□□ -2.13
LAPTM4BQ86VI4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.71□□□□□ -2.14
LAPTM4BQ86VI4 RNA5SP268-201ENST00000516828 124 ntBASIC1.71□□□□□ -2.14
LAPTM4BQ86VI4 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
LAPTM4BQ86VI4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.7□□□□□ -2.14
LAPTM4BQ86VI4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LAPTM4BQ86VI4 RNU6-482P-201ENST00000391068 107 ntBASIC1.7□□□□□ -2.14
LAPTM4BQ86VI4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.7□□□□□ -2.14
LAPTM4BQ86VI4 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
LAPTM4BQ86VI4 AL353997.5-201ENST00000618886 171 ntBASIC1.7□□□□□ -2.14
LAPTM4BQ86VI4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
LAPTM4BQ86VI4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
LAPTM4BQ86VI4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LAPTM4BQ86VI4 RNU1-17P-201ENST00000363022 152 ntBASIC1.69□□□□□ -2.14
LAPTM4BQ86VI4 SNORD1B-201ENST00000363091 84 ntBASIC1.69□□□□□ -2.14
LAPTM4BQ86VI4 SNORA36.1-201ENST00000363424 132 ntBASIC1.69□□□□□ -2.14
LAPTM4BQ86VI4 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
LAPTM4BQ86VI4 AC243829.3-201ENST00000622177 108 ntBASIC1.69□□□□□ -2.14
LAPTM4BQ86VI4 AC084768.2-201ENST00000622736 221 ntBASIC1.69□□□□□ -2.14
LAPTM4BQ86VI4 SNORD124-201ENST00000459577 104 ntBASIC1.68□□□□□ -2.14
LAPTM4BQ86VI4 SNORA70.25-201ENST00000612741 95 ntBASIC1.68□□□□□ -2.14
LAPTM4BQ86VI4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
LAPTM4BQ86VI4 RNU6-838P-201ENST00000363399 108 ntBASIC1.67□□□□□ -2.14
LAPTM4BQ86VI4 MIR548AG1-201ENST00000579932 66 ntBASIC1.67□□□□□ -2.14
LAPTM4BQ86VI4 Y_RNA.109-201ENST00000363215 102 ntBASIC1.66□□□□□ -2.14
LAPTM4BQ86VI4 SNORA25.15-201ENST00000516487 89 ntBASIC1.66□□□□□ -2.14
LAPTM4BQ86VI4 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
LAPTM4BQ86VI4 MIR4752-201ENST00000579672 72 ntBASIC1.66□□□□□ -2.14
LAPTM4BQ86VI4 MIR4490-201ENST00000582647 84 ntBASIC1.66□□□□□ -2.14
LAPTM4BQ86VI4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
LAPTM4BQ86VI4 MIR18A-201ENST00000362310 71 ntBASIC1.65□□□□□ -2.15
LAPTM4BQ86VI4 AC011195.1-201ENST00000578177 177 ntBASIC1.65□□□□□ -2.15
LAPTM4BQ86VI4 AC025627.3-201ENST00000582078 182 ntBASIC1.65□□□□□ -2.15
LAPTM4BQ86VI4 MIR7107-201ENST00000611489 80 ntBASIC1.65□□□□□ -2.15
LAPTM4BQ86VI4 RNA5SP458-201ENST00000516188 119 ntBASIC1.64□□□□□ -2.15
LAPTM4BQ86VI4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
LAPTM4BQ86VI4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LAPTM4BQ86VI4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LAPTM4BQ86VI4 MIR20A-201ENST00000362279 71 ntBASIC1.63□□□□□ -2.15
LAPTM4BQ86VI4 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
LAPTM4BQ86VI4 SNORD13-201ENST00000459299 104 ntBASIC1.63□□□□□ -2.15
LAPTM4BQ86VI4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LAPTM4BQ86VI4 SNORA17.3-201ENST00000391159 129 ntBASIC1.62□□□□□ -2.15
LAPTM4BQ86VI4 AC244090.1-201ENST00000441884 93 ntBASIC1.62□□□□□ -2.15
LAPTM4BQ86VI4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
LAPTM4BQ86VI4 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
LAPTM4BQ86VI4 MIR200A-201ENST00000384875 90 ntBASIC1.61□□□□□ -2.15
LAPTM4BQ86VI4 HMGN2P22-201ENST00000427588 175 ntBASIC1.61□□□□□ -2.15
LAPTM4BQ86VI4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
LAPTM4BQ86VI4 MIR429-201ENST00000362106 83 ntBASIC1.6□□□□□ -2.15
LAPTM4BQ86VI4 SNORD115-25-201ENST00000362619 82 ntBASIC1.6□□□□□ -2.15
LAPTM4BQ86VI4 MIR579-201ENST00000385221 98 ntBASIC1.6□□□□□ -2.15
LAPTM4BQ86VI4 RNA5SP247-201ENST00000411181 105 ntBASIC1.6□□□□□ -2.15
LAPTM4BQ86VI4 RNA5SP94-201ENST00000516917 108 ntBASIC1.6□□□□□ -2.15
LAPTM4BQ86VI4 MIR4285-201ENST00000581001 85 ntBASIC1.6□□□□□ -2.15
LAPTM4BQ86VI4 MIR19B1-201ENST00000384829 87 ntBASIC1.59□□□□□ -2.15
LAPTM4BQ86VI4 RNU6-337P-201ENST00000391243 106 ntBASIC1.59□□□□□ -2.15
LAPTM4BQ86VI4 SNORD99-201ENST00000408612 74 ntBASIC1.59□□□□□ -2.15
LAPTM4BQ86VI4 RNU6-419P-201ENST00000517030 63 ntBASIC1.59□□□□□ -2.15
LAPTM4BQ86VI4 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
LAPTM4BQ86VI4 RNU6-247P-201ENST00000362636 107 ntBASIC1.58□□□□□ -2.16
LAPTM4BQ86VI4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.58□□□□□ -2.16
LAPTM4BQ86VI4 RNU6-458P-201ENST00000384179 107 ntBASIC1.58□□□□□ -2.16
LAPTM4BQ86VI4 AL603825.1-201ENST00000438481 80 ntBASIC1.58□□□□□ -2.16
LAPTM4BQ86VI4 U6.58-201ENST00000613107 107 ntBASIC1.58□□□□□ -2.16
LAPTM4BQ86VI4 RNU7-154P-201ENST00000516194 62 ntBASIC1.57□□□□□ -2.16
LAPTM4BQ86VI4 MIR6773-201ENST00000612812 74 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms