Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNU6-1335P-201ENST00000365426 107 ntBASIC1.4□□□□□ -2.19
RNF43Q68DV7 RNU6-716P-201ENST00000365621 103 ntBASIC1.4□□□□□ -2.19
RNF43Q68DV7 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
RNF43Q68DV7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RNF43Q68DV7 RNU6-446P-201ENST00000362827 106 ntBASIC1.39□□□□□ -2.19
RNF43Q68DV7 RNU1-141P-201ENST00000364623 158 ntBASIC1.39□□□□□ -2.19
RNF43Q68DV7 MIR598-201ENST00000384868 97 ntBASIC1.39□□□□□ -2.19
RNF43Q68DV7 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
RNF43Q68DV7 RNU5B-6P-201ENST00000516765 68 ntBASIC1.39□□□□□ -2.19
RNF43Q68DV7 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
RNF43Q68DV7 MIR548V-201ENST00000584165 80 ntBASIC1.39□□□□□ -2.19
RNF43Q68DV7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RNF43Q68DV7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
RNF43Q68DV7 SNORD18A-201ENST00000363753 72 ntBASIC1.38□□□□□ -2.19
RNF43Q68DV7 RNU1-93P-201ENST00000364704 169 ntBASIC1.38□□□□□ -2.19
RNF43Q68DV7 RPS29P1-201ENST00000465274 159 ntBASIC1.38□□□□□ -2.19
RNF43Q68DV7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.38□□□□□ -2.19
RNF43Q68DV7 MIR520E-201ENST00000384867 87 ntBASIC1.37□□□□□ -2.19
RNF43Q68DV7 SNORD105-201ENST00000386910 85 ntBASIC1.37□□□□□ -2.19
RNF43Q68DV7 snoU13.13-201ENST00000458842 104 ntBASIC1.37□□□□□ -2.19
RNF43Q68DV7 RNA5SP47-201ENST00000517230 109 ntBASIC1.37□□□□□ -2.19
RNF43Q68DV7 AC018659.1-201ENST00000551083 169 ntBASIC1.37□□□□□ -2.19
RNF43Q68DV7 MIR548C-201ENST00000384815 97 ntBASIC1.36□□□□□ -2.19
RNF43Q68DV7 RNU6-269P-201ENST00000391077 97 ntBASIC1.36□□□□□ -2.19
RNF43Q68DV7 SNORA75.1-201ENST00000391130 148 ntBASIC1.36□□□□□ -2.19
RNF43Q68DV7 AL157398.1-201ENST00000452981 186 ntBASIC1.36□□□□□ -2.19
RNF43Q68DV7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.36□□□□□ -2.19
RNF43Q68DV7 MIR151B-201ENST00000584249 96 ntBASIC1.36□□□□□ -2.19
RNF43Q68DV7 RNU6-92P-201ENST00000605893 104 ntBASIC1.36□□□□□ -2.19
RNF43Q68DV7 RNA5SP327-201ENST00000362494 101 ntBASIC1.35□□□□□ -2.19
RNF43Q68DV7 SNORA25-201ENST00000384384 134 ntBASIC1.35□□□□□ -2.19
RNF43Q68DV7 RNU6-1162P-201ENST00000384443 104 ntBASIC1.35□□□□□ -2.19
RNF43Q68DV7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.35□□□□□ -2.19
RNF43Q68DV7 RNU6-122P-201ENST00000516818 107 ntBASIC1.35□□□□□ -2.19
RNF43Q68DV7 MIR3678-201ENST00000578455 94 ntBASIC1.35□□□□□ -2.19
RNF43Q68DV7 SNORD114-27-201ENST00000363766 70 ntBASIC1.34□□□□□ -2.19
RNF43Q68DV7 SNORD114-4-201ENST00000363962 75 ntBASIC1.34□□□□□ -2.19
RNF43Q68DV7 RNA5SP484-201ENST00000458857 111 ntBASIC1.34□□□□□ -2.19
RNF43Q68DV7 MIR3938-201ENST00000582157 103 ntBASIC1.34□□□□□ -2.19
RNF43Q68DV7 MIR6788-201ENST00000618842 66 ntBASIC1.34□□□□□ -2.19
RNF43Q68DV7 MIR7978-201ENST00000636158 59 ntBASIC1.34□□□□□ -2.19
RNF43Q68DV7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
RNF43Q68DV7 RNU6-302P-201ENST00000365249 107 ntBASIC1.33□□□□□ -2.2
RNF43Q68DV7 SNORA8.2-201ENST00000384372 139 ntBASIC1.33□□□□□ -2.2
RNF43Q68DV7 MIR630-201ENST00000384957 97 ntBASIC1.33□□□□□ -2.2
RNF43Q68DV7 U7.7-201ENST00000459276 60 ntBASIC1.33□□□□□ -2.2
RNF43Q68DV7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.33□□□□□ -2.2
RNF43Q68DV7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.33□□□□□ -2.2
RNF43Q68DV7 SNORD60.1-201ENST00000362451 73 ntBASIC1.32□□□□□ -2.2
RNF43Q68DV7 Y_RNA.250-201ENST00000364542 110 ntBASIC1.32□□□□□ -2.2
RNF43Q68DV7 MIR521-2-201ENST00000384818 87 ntBASIC1.32□□□□□ -2.2
RNF43Q68DV7 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
RNF43Q68DV7 MIR3612-201ENST00000579753 87 ntBASIC1.32□□□□□ -2.2
RNF43Q68DV7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
RNF43Q68DV7 SNORD113-4-201ENST00000364802 75 ntBASIC1.31□□□□□ -2.2
RNF43Q68DV7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RNF43Q68DV7 MIR548J-201ENST00000408833 112 ntBASIC1.31□□□□□ -2.2
RNF43Q68DV7 FABP5P4-201ENST00000437203 171 ntBASIC1.31□□□□□ -2.2
RNF43Q68DV7 SCARNA16.5-201ENST00000517114 183 ntBASIC1.31□□□□□ -2.2
RNF43Q68DV7 MIR573-201ENST00000384964 99 ntBASIC1.3□□□□□ -2.2
RNF43Q68DV7 Y_RNA.722-201ENST00000517279 114 ntBASIC1.3□□□□□ -2.2
RNF43Q68DV7 AC021146.9-201ENST00000512503 156 ntBASIC1.29□□□□□ -2.2
RNF43Q68DV7 SNORD124-201ENST00000459577 104 ntBASIC1.28□□□□□ -2.2
RNF43Q68DV7 AL162376.1-201ENST00000624117 175 ntBASIC1.28□□□□□ -2.2
RNF43Q68DV7 SNORA33.1-201ENST00000364957 130 ntBASIC1.27□□□□□ -2.21
RNF43Q68DV7 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
RNF43Q68DV7 MIR517B-201ENST00000385102 67 ntBASIC1.27□□□□□ -2.21
RNF43Q68DV7 U2.7-201ENST00000619197 100 ntBASIC1.27□□□□□ -2.21
RNF43Q68DV7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.27□□□□□ -2.21
RNF43Q68DV7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
RNF43Q68DV7 RNU6-936P-201ENST00000384005 107 ntBASIC1.26□□□□□ -2.21
RNF43Q68DV7 MIR652-201ENST00000385278 98 ntBASIC1.26□□□□□ -2.21
RNF43Q68DV7 Y_RNA.633-201ENST00000459107 95 ntBASIC1.26□□□□□ -2.21
RNF43Q68DV7 RNU7-174P-201ENST00000516248 59 ntBASIC1.26□□□□□ -2.21
RNF43Q68DV7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.25□□□□□ -2.21
RNF43Q68DV7 SNORA15B-2-201ENST00000384058 135 ntBASIC1.25□□□□□ -2.21
RNF43Q68DV7 SNORA15B-1-201ENST00000384334 135 ntBASIC1.25□□□□□ -2.21
RNF43Q68DV7 MIR19B1-201ENST00000384829 87 ntBASIC1.25□□□□□ -2.21
RNF43Q68DV7 MIR6828-201ENST00000636181 60 ntBASIC1.25□□□□□ -2.21
RNF43Q68DV7 RNU6-698P-201ENST00000363523 107 ntBASIC1.24□□□□□ -2.21
RNF43Q68DV7 RNU6-34P-201ENST00000364874 107 ntBASIC1.24□□□□□ -2.21
RNF43Q68DV7 Y_RNA.407-201ENST00000383986 113 ntBASIC1.24□□□□□ -2.21
RNF43Q68DV7 SNORD113-2-201ENST00000391082 72 ntBASIC1.24□□□□□ -2.21
RNF43Q68DV7 SCARNA17.3-201ENST00000516381 125 ntBASIC1.24□□□□□ -2.21
RNF43Q68DV7 MIR548AE1-201ENST00000583292 70 ntBASIC1.24□□□□□ -2.21
RNF43Q68DV7 Y_RNA.125-201ENST00000363371 111 ntBASIC1.23□□□□□ -2.21
RNF43Q68DV7 MIR582-201ENST00000365731 98 ntBASIC1.23□□□□□ -2.21
RNF43Q68DV7 RNU6-808P-201ENST00000391233 108 ntBASIC1.23□□□□□ -2.21
RNF43Q68DV7 RNA5SP227-201ENST00000516184 113 ntBASIC1.23□□□□□ -2.21
RNF43Q68DV7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.23□□□□□ -2.21
RNF43Q68DV7 U4.4-201ENST00000620626 117 ntBASIC1.23□□□□□ -2.21
RNF43Q68DV7 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
RNF43Q68DV7 SNORA63.6-201ENST00000364921 119 ntBASIC1.22□□□□□ -2.21
RNF43Q68DV7 MIR200A-201ENST00000384875 90 ntBASIC1.22□□□□□ -2.21
RNF43Q68DV7 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
RNF43Q68DV7 MIR4473-201ENST00000583731 91 ntBASIC1.22□□□□□ -2.21
RNF43Q68DV7 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
RNF43Q68DV7 uc_338.10-201ENST00000621872 182 ntBASIC1.22□□□□□ -2.21
RNF43Q68DV7 RNU6-1312P-201ENST00000362425 108 ntBASIC1.21□□□□□ -2.22
RNF43Q68DV7 SNORA36.1-201ENST00000363424 132 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 285.3 ms