Protein–RNA interactions for Protein: Q02446

SP4, Transcription factor Sp4, humanhuman

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP4Q02446 RNU6-1064P-201ENST00000410626 104 ntBASIC-1□□□□□ -2.57
SP4Q02446 Y_RNA.668-201ENST00000516233 93 ntBASIC-1□□□□□ -2.57
SP4Q02446 RNU6-980P-201ENST00000516925 103 ntBASIC-1□□□□□ -2.57
SP4Q02446 AC008737.2-201ENST00000599446 118 ntBASIC-1□□□□□ -2.57
SP4Q02446 snoR1.1-201ENST00000628177 80 ntBASIC-1□□□□□ -2.57
SP4Q02446 AL512310.12-203ENST00000640543 90 ntBASIC-1□□□□□ -2.57
SP4Q02446 SNORD38.1-201ENST00000363863 68 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 RNU6-647P-201ENST00000364243 107 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 MIR507-201ENST00000385234 94 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 MIR759-201ENST00000390224 91 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 SNORA7.5-201ENST00000410672 110 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 MIR3139-201ENST00000579145 76 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 MIR548AG1-201ENST00000579932 66 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 MIR4696-201ENST00000581431 70 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 MIR3128-201ENST00000581957 66 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.01□□□□□ -2.57
SP4Q02446 RNU6-664P-201ENST00000362381 107 ntBASIC-1.02□□□□□ -2.57
SP4Q02446 RNU6-235P-201ENST00000362644 107 ntBASIC-1.02□□□□□ -2.57
SP4Q02446 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.02□□□□□ -2.57
SP4Q02446 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.02□□□□□ -2.57
SP4Q02446 MIR606-201ENST00000384851 96 ntBASIC-1.02□□□□□ -2.57
SP4Q02446 RNU6-935P-201ENST00000410371 100 ntBASIC-1.02□□□□□ -2.57
SP4Q02446 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.02□□□□□ -2.57
SP4Q02446 RNU6-111P-201ENST00000517179 105 ntBASIC-1.02□□□□□ -2.57
SP4Q02446 RNU6-79P-201ENST00000362511 107 ntBASIC-1.03□□□□□ -2.57
SP4Q02446 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.03□□□□□ -2.57
SP4Q02446 RNU6-990P-201ENST00000364385 104 ntBASIC-1.03□□□□□ -2.57
SP4Q02446 RNU6-80P-201ENST00000384195 107 ntBASIC-1.03□□□□□ -2.57
SP4Q02446 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.03□□□□□ -2.57
SP4Q02446 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.03□□□□□ -2.57
SP4Q02446 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.03□□□□□ -2.57
SP4Q02446 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.03□□□□□ -2.57
SP4Q02446 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.03□□□□□ -2.57
SP4Q02446 AC130289.1-201ENST00000577321 73 ntBASIC-1.03□□□□□ -2.57
SP4Q02446 RNY4P6-201ENST00000363667 96 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 SNORD114-4-201ENST00000363962 75 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 SNORA62.4-201ENST00000365504 151 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 AC022559.1-201ENST00000520905 205 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 MIR3121-201ENST00000579680 77 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.04□□□□□ -2.58
SP4Q02446 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.04□□□□□ -2.58
SP4Q02446 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.05□□□□□ -2.58
SP4Q02446 RNA5SP405-201ENST00000363059 114 ntBASIC-1.05□□□□□ -2.58
SP4Q02446 SNORD114-3-201ENST00000364969 75 ntBASIC-1.05□□□□□ -2.58
SP4Q02446 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.05□□□□□ -2.58
SP4Q02446 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.05□□□□□ -2.58
SP4Q02446 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.05□□□□□ -2.58
SP4Q02446 SNORD115-27-201ENST00000364430 82 ntBASIC-1.06□□□□□ -2.58
SP4Q02446 SNORA20.1-201ENST00000364790 130 ntBASIC-1.06□□□□□ -2.58
SP4Q02446 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.06□□□□□ -2.58
SP4Q02446 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.06□□□□□ -2.58
SP4Q02446 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.06□□□□□ -2.58
SP4Q02446 MIR1302-3-201ENST00000408128 138 ntBASIC-1.06□□□□□ -2.58
SP4Q02446 MTCYBP9-201ENST00000431021 303 ntBASIC-1.06□□□□□ -2.58
SP4Q02446 AP002392.1-201ENST00000537692 208 ntBASIC-1.06□□□□□ -2.58
SP4Q02446 AC062037.2-201ENST00000610137 73 ntBASIC-1.06□□□□□ -2.58
SP4Q02446 RNU6-363P-201ENST00000362895 105 ntBASIC-1.07□□□□□ -2.58
SP4Q02446 SNORA63.6-201ENST00000364921 119 ntBASIC-1.07□□□□□ -2.58
SP4Q02446 MIR548D2-201ENST00000384955 97 ntBASIC-1.07□□□□□ -2.58
SP4Q02446 MT-TM-201ENST00000387377 68 ntBASIC-1.07□□□□□ -2.58
SP4Q02446 U3.27-201ENST00000391237 200 ntBASIC-1.07□□□□□ -2.58
SP4Q02446 RNU4-88P-201ENST00000411220 86 ntBASIC-1.07□□□□□ -2.58
SP4Q02446 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.07□□□□□ -2.58
SP4Q02446 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.08□□□□□ -2.58
SP4Q02446 MIR451A-201ENST00000385059 72 ntBASIC-1.08□□□□□ -2.58
SP4Q02446 RNA5SP136-201ENST00000410906 107 ntBASIC-1.08□□□□□ -2.58
SP4Q02446 AL353691.2-201ENST00000443795 59 ntBASIC-1.08□□□□□ -2.58
SP4Q02446 AC072026.1-201ENST00000605023 201 ntBASIC-1.08□□□□□ -2.58
SP4Q02446 RNU6-563P-201ENST00000364872 108 ntBASIC-1.09□□□□□ -2.58
SP4Q02446 RNU6-915P-201ENST00000364943 103 ntBASIC-1.09□□□□□ -2.58
SP4Q02446 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.09□□□□□ -2.58
SP4Q02446 RNU6-246P-201ENST00000384702 107 ntBASIC-1.09□□□□□ -2.58
SP4Q02446 RNU6-400P-201ENST00000391173 106 ntBASIC-1.09□□□□□ -2.58
SP4Q02446 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.09□□□□□ -2.58
SP4Q02446 MIR5683-201ENST00000636514 76 ntBASIC-1.09□□□□□ -2.58
SP4Q02446 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 RNA5SP93-201ENST00000362525 114 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 RNU4-11P-201ENST00000365287 132 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 SNORD115-31-201ENST00000365318 82 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 RNU6-409P-201ENST00000384114 104 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 RNU6-738P-201ENST00000384531 106 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.1□□□□□ -2.59
SP4Q02446 MIR1255B2-201ENST00000408618 67 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 RNU7-197P-201ENST00000458836 62 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 MIR3123-201ENST00000583417 75 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 MIR548AM-201ENST00000584298 74 ntBASIC-1.1□□□□□ -2.59
SP4Q02446 RNU6-924P-201ENST00000362926 108 ntBASIC-1.11□□□□□ -2.59
SP4Q02446 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.11□□□□□ -2.59
SP4Q02446 SNORA33.1-201ENST00000364957 130 ntBASIC-1.11□□□□□ -2.59
SP4Q02446 RNU6-608P-201ENST00000383927 104 ntBASIC-1.11□□□□□ -2.59
SP4Q02446 MIR520D-201ENST00000385002 87 ntBASIC-1.11□□□□□ -2.59
SP4Q02446 RNU6-695P-201ENST00000391157 104 ntBASIC-1.11□□□□□ -2.59
SP4Q02446 MIR1263-201ENST00000408324 86 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 500.6 ms