Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC104996.3-201ENST00000590718 94 ntBASIC-1.44□□□□□ -2.64
CBX1P83916 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.45□□□□□ -2.64
CBX1P83916 SNORD18.2-201ENST00000459604 70 ntBASIC-1.45□□□□□ -2.64
CBX1P83916 AC021146.9-201ENST00000512503 156 ntBASIC-1.45□□□□□ -2.64
CBX1P83916 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.46□□□□□ -2.64
CBX1P83916 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.46□□□□□ -2.64
CBX1P83916 SNORD75.2-201ENST00000408784 58 ntBASIC-1.46□□□□□ -2.64
CBX1P83916 RNA5SP272-201ENST00000516095 111 ntBASIC-1.46□□□□□ -2.64
CBX1P83916 RNU6-990P-201ENST00000364385 104 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 SNORA62.4-201ENST00000365504 151 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 SNORA24B-201ENST00000384176 131 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 RNU6-813P-201ENST00000384691 107 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 MIR587-201ENST00000384845 96 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 RNU7-24P-201ENST00000458867 62 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 RNU6-772P-201ENST00000516042 105 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 MIR3613-201ENST00000579844 87 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 AC103810.7-201ENST00000607821 91 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 MIR6738-201ENST00000619620 64 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 U6.96-201ENST00000636425 70 ntBASIC-1.47□□□□□ -2.64
CBX1P83916 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.48□□□□□ -2.65
CBX1P83916 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.48□□□□□ -2.65
CBX1P83916 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.48□□□□□ -2.65
CBX1P83916 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.48□□□□□ -2.65
CBX1P83916 SNORD4B-201ENST00000459083 72 ntBASIC-1.48□□□□□ -2.65
CBX1P83916 AL157777.2-201ENST00000258070 137 ntBASIC-1.49□□□□□ -2.65
CBX1P83916 RNU6-426P-201ENST00000516464 97 ntBASIC-1.49□□□□□ -2.65
CBX1P83916 YWHAEP3-201ENST00000582767 121 ntBASIC-1.49□□□□□ -2.65
CBX1P83916 MIR548Z-201ENST00000584743 97 ntBASIC-1.49□□□□□ -2.65
CBX1P83916 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.5□□□□□ -2.65
CBX1P83916 MIR4324-201ENST00000584846 72 ntBASIC-1.5□□□□□ -2.65
CBX1P83916 MIR548A1-201ENST00000385041 97 ntBASIC-1.51□□□□□ -2.65
CBX1P83916 RNU6-519P-201ENST00000410590 108 ntBASIC-1.51□□□□□ -2.65
CBX1P83916 RNU6-62P-201ENST00000516526 102 ntBASIC-1.51□□□□□ -2.65
CBX1P83916 RNY1P9-201ENST00000532431 109 ntBASIC-1.51□□□□□ -2.65
CBX1P83916 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.51□□□□□ -2.65
CBX1P83916 MIR124-2-201ENST00000385081 109 ntBASIC-1.52□□□□□ -2.65
CBX1P83916 MTND4LP9-201ENST00000427694 174 ntBASIC-1.52□□□□□ -2.65
CBX1P83916 MIR409-201ENST00000362237 79 ntBASIC-1.53□□□□□ -2.65
CBX1P83916 RNU6-208P-201ENST00000362431 107 ntBASIC-1.53□□□□□ -2.65
CBX1P83916 RNU6-10P-201ENST00000384036 107 ntBASIC-1.53□□□□□ -2.65
CBX1P83916 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.53□□□□□ -2.65
CBX1P83916 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.53□□□□□ -2.65
CBX1P83916 MT-TG-201ENST00000387429 68 ntBASIC-1.53□□□□□ -2.65
CBX1P83916 SNORD57-201ENST00000448188 72 ntBASIC-1.53□□□□□ -2.65
CBX1P83916 MIR5009-201ENST00000578736 100 ntBASIC-1.53□□□□□ -2.65
CBX1P83916 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.54□□□□□ -2.66
CBX1P83916 MTATP6P29-201ENST00000415057 132 ntBASIC-1.54□□□□□ -2.66
CBX1P83916 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.54□□□□□ -2.66
CBX1P83916 RNU6-182P-201ENST00000516970 105 ntBASIC-1.54□□□□□ -2.66
CBX1P83916 MTND5P41-201ENST00000517498 206 ntBASIC-1.54□□□□□ -2.66
CBX1P83916 AC006254.2-201ENST00000603259 279 ntBASIC-1.54□□□□□ -2.66
CBX1P83916 AL353621.2-201ENST00000605340 133 ntBASIC-1.54□□□□□ -2.66
CBX1P83916 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.55□□□□□ -2.66
CBX1P83916 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.55□□□□□ -2.66
CBX1P83916 RNU6-431P-201ENST00000383874 107 ntBASIC-1.56□□□□□ -2.66
CBX1P83916 MIR147A-201ENST00000385079 72 ntBASIC-1.56□□□□□ -2.66
CBX1P83916 SNORD64-201ENST00000386683 67 ntBASIC-1.56□□□□□ -2.66
CBX1P83916 RNA5SP292-201ENST00000390974 118 ntBASIC-1.56□□□□□ -2.66
CBX1P83916 SNORA40-201ENST00000388090 126 ntBASIC-1.57□□□□□ -2.66
CBX1P83916 AL500527.2-201ENST00000454105 95 ntBASIC-1.57□□□□□ -2.66
CBX1P83916 AC140658.3-201ENST00000567603 271 ntBASIC-1.57□□□□□ -2.66
CBX1P83916 uc_338.19-201ENST00000616808 99 ntBASIC-1.57□□□□□ -2.66
CBX1P83916 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.58□□□□□ -2.66
CBX1P83916 SNORA18.5-201ENST00000516616 101 ntBASIC-1.58□□□□□ -2.66
CBX1P83916 AL353803.5-201ENST00000599815 141 ntBASIC-1.58□□□□□ -2.66
CBX1P83916 SNORD114-17-201ENST00000364699 75 ntBASIC-1.59□□□□□ -2.66
CBX1P83916 RNU6-382P-201ENST00000365181 106 ntBASIC-1.59□□□□□ -2.66
CBX1P83916 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.6□□□□□ -2.67
CBX1P83916 RNU6-260P-201ENST00000384092 107 ntBASIC-1.6□□□□□ -2.67
CBX1P83916 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.6□□□□□ -2.67
CBX1P83916 SNORD90-201ENST00000391145 111 ntBASIC-1.6□□□□□ -2.67
CBX1P83916 MIR548I1-201ENST00000408810 149 ntBASIC-1.6□□□□□ -2.67
CBX1P83916 RNA5SP266-201ENST00000410273 108 ntBASIC-1.6□□□□□ -2.67
CBX1P83916 MIR4777-201ENST00000583710 86 ntBASIC-1.6□□□□□ -2.67
CBX1P83916 AC090617.8-201ENST00000623339 167 ntBASIC-1.6□□□□□ -2.67
CBX1P83916 MIR4320-201ENST00000636981 65 ntBASIC-1.6□□□□□ -2.67
CBX1P83916 RNU5F-1-201ENST00000362507 117 ntBASIC-1.61□□□□□ -2.67
CBX1P83916 snoU13.17-201ENST00000458802 104 ntBASIC-1.61□□□□□ -2.67
CBX1P83916 RNU7-107P-201ENST00000459121 61 ntBASIC-1.61□□□□□ -2.67
CBX1P83916 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.61□□□□□ -2.67
CBX1P83916 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.62□□□□□ -2.67
CBX1P83916 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.62□□□□□ -2.67
CBX1P83916 RNU6-886P-201ENST00000384319 105 ntBASIC-1.62□□□□□ -2.67
CBX1P83916 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
CBX1P83916 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.62□□□□□ -2.67
CBX1P83916 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.62□□□□□ -2.67
CBX1P83916 MIR4499-201ENST00000584834 69 ntBASIC-1.62□□□□□ -2.67
CBX1P83916 MIR4773-1-201ENST00000637203 78 ntBASIC-1.62□□□□□ -2.67
CBX1P83916 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.63□□□□□ -2.67
CBX1P83916 RNU6-795P-201ENST00000516323 103 ntBASIC-1.63□□□□□ -2.67
CBX1P83916 RNA5SP470-201ENST00000516463 106 ntBASIC-1.63□□□□□ -2.67
CBX1P83916 MIR4464-201ENST00000580818 92 ntBASIC-1.63□□□□□ -2.67
CBX1P83916 MIR382-201ENST00000637119 76 ntBASIC-1.63□□□□□ -2.67
CBX1P83916 RNU4-32P-201ENST00000363404 141 ntBASIC-1.64□□□□□ -2.67
CBX1P83916 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.64□□□□□ -2.67
CBX1P83916 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.64□□□□□ -2.67
CBX1P83916 RNU6-24P-201ENST00000384440 107 ntBASIC-1.64□□□□□ -2.67
CBX1P83916 RNU6-257P-201ENST00000410238 98 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms