Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RNU6-168P-201ENST00000516189 101 ntBASIC0.08□□□□□ -2.4
RIPK4P57078 Y_RNA.81-201ENST00000362997 102 ntBASIC0.07□□□□□ -2.4
RIPK4P57078 RNU6-54P-201ENST00000365563 107 ntBASIC0.07□□□□□ -2.4
RIPK4P57078 SNORA24B-201ENST00000384176 131 ntBASIC0.07□□□□□ -2.4
RIPK4P57078 MIR593-201ENST00000384856 100 ntBASIC0.07□□□□□ -2.4
RIPK4P57078 MIR516B1-201ENST00000385211 90 ntBASIC0.07□□□□□ -2.4
RIPK4P57078 SNORD42B-201ENST00000458893 67 ntBASIC0.07□□□□□ -2.4
RIPK4P57078 RN7SL660P-201ENST00000614852 299 ntBASIC0.07□□□□□ -2.4
RIPK4P57078 Y_RNA.96-201ENST00000363092 109 ntBASIC0.06□□□□□ -2.4
RIPK4P57078 RNU6-49P-201ENST00000384256 107 ntBASIC0.06□□□□□ -2.4
RIPK4P57078 MIR145-201ENST00000384967 88 ntBASIC0.06□□□□□ -2.4
RIPK4P57078 MIR652-201ENST00000385278 98 ntBASIC0.06□□□□□ -2.4
RIPK4P57078 Y_RNA.677-201ENST00000516401 85 ntBASIC0.06□□□□□ -2.4
RIPK4P57078 RNU6-267P-201ENST00000516714 103 ntBASIC0.06□□□□□ -2.4
RIPK4P57078 SCARNA11.2-201ENST00000517183 154 ntBASIC0.06□□□□□ -2.4
RIPK4P57078 MIR2052-201ENST00000636055 55 ntBASIC0.06□□□□□ -2.4
RIPK4P57078 SNORD114-5-201ENST00000362928 70 ntBASIC0.05□□□□□ -2.4
RIPK4P57078 RNA5SP98-201ENST00000363158 137 ntBASIC0.05□□□□□ -2.4
RIPK4P57078 RNU6-1051P-201ENST00000365471 102 ntBASIC0.05□□□□□ -2.4
RIPK4P57078 Y_RNA.437-201ENST00000384113 113 ntBASIC0.05□□□□□ -2.4
RIPK4P57078 MIR548U-201ENST00000390728 81 ntBASIC0.05□□□□□ -2.4
RIPK4P57078 RNU6-762P-201ENST00000517107 102 ntBASIC0.05□□□□□ -2.4
RIPK4P57078 RNU6-1057P-201ENST00000517162 102 ntBASIC0.05□□□□□ -2.4
RIPK4P57078 SNORA63.2-201ENST00000362603 126 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 RNU6-219P-201ENST00000364728 107 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 RNU6-30P-201ENST00000384561 107 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 MIR106A-201ENST00000384870 81 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 U3.27-201ENST00000391237 200 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 MIR876-201ENST00000401147 81 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 RNU6-175P-201ENST00000516896 107 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 RNU7-188P-201ENST00000517063 64 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 U7.6-201ENST00000610841 64 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 AC084368.1-201ENST00000620935 65 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 uc_338.10-201ENST00000621872 182 ntBASIC0.04□□□□□ -2.4
RIPK4P57078 RNU6-1131P-201ENST00000364955 107 ntBASIC0.03□□□□□ -2.4
RIPK4P57078 RNU6-302P-201ENST00000365249 107 ntBASIC0.03□□□□□ -2.4
RIPK4P57078 RNU6-652P-201ENST00000365488 107 ntBASIC0.03□□□□□ -2.4
RIPK4P57078 Y_RNA.407-201ENST00000383986 113 ntBASIC0.03□□□□□ -2.4
RIPK4P57078 RNU6-154P-201ENST00000384306 106 ntBASIC0.03□□□□□ -2.4
RIPK4P57078 Y_RNA.558-201ENST00000384685 113 ntBASIC0.03□□□□□ -2.4
RIPK4P57078 MIR4668-201ENST00000582284 70 ntBASIC0.03□□□□□ -2.4
RIPK4P57078 SNORD114-31-201ENST00000363219 75 ntBASIC0.02□□□□□ -2.41
RIPK4P57078 RNY4P3-201ENST00000365254 95 ntBASIC0.02□□□□□ -2.41
RIPK4P57078 RNU6-497P-201ENST00000365316 104 ntBASIC0.02□□□□□ -2.41
RIPK4P57078 RNU6-402P-201ENST00000410678 103 ntBASIC0.02□□□□□ -2.41
RIPK4P57078 Y_RNA.620-201ENST00000411009 88 ntBASIC0.02□□□□□ -2.41
RIPK4P57078 RNU6-180P-201ENST00000516697 61 ntBASIC0.02□□□□□ -2.41
RIPK4P57078 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
RIPK4P57078 RNU6-633P-201ENST00000362612 103 ntBASIC0.01□□□□□ -2.41
RIPK4P57078 RNU6-495P-201ENST00000362995 107 ntBASIC0.01□□□□□ -2.41
RIPK4P57078 RNA5SP368-201ENST00000364298 116 ntBASIC0.01□□□□□ -2.41
RIPK4P57078 MIR610-201ENST00000385139 96 ntBASIC0.01□□□□□ -2.41
RIPK4P57078 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
RIPK4P57078 RNA5SP163-201ENST00000410304 99 ntBASIC0.01□□□□□ -2.41
RIPK4P57078 snoU13.19-201ENST00000459148 104 ntBASIC0.01□□□□□ -2.41
RIPK4P57078 MIR4796-201ENST00000580742 81 ntBASIC0.01□□□□□ -2.41
RIPK4P57078 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
RIPK4P57078 RNU6-824P-201ENST00000363724 104 ntBASIC0□□□□□ -2.41
RIPK4P57078 MIR582-201ENST00000365731 98 ntBASIC0□□□□□ -2.41
RIPK4P57078 MIR216B-201ENST00000390186 82 ntBASIC0□□□□□ -2.41
RIPK4P57078 MIR1236-201ENST00000408340 102 ntBASIC0□□□□□ -2.41
RIPK4P57078 RNU7-165P-201ENST00000458864 60 ntBASIC0□□□□□ -2.41
RIPK4P57078 AC097510.1-201ENST00000510945 133 ntBASIC0□□□□□ -2.41
RIPK4P57078 RNU6-929P-201ENST00000384429 107 ntBASIC-0.01□□□□□ -2.41
RIPK4P57078 SNORD116-22-201ENST00000384430 92 ntBASIC-0.01□□□□□ -2.41
RIPK4P57078 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.01□□□□□ -2.41
RIPK4P57078 RNY4P30-201ENST00000410216 95 ntBASIC-0.01□□□□□ -2.41
RIPK4P57078 RNU6-844P-201ENST00000517175 102 ntBASIC-0.01□□□□□ -2.41
RIPK4P57078 IGLVI-20-201ENST00000519296 130 ntBASIC-0.01□□□□□ -2.41
RIPK4P57078 MIR6514-201ENST00000622549 70 ntBASIC-0.01□□□□□ -2.41
RIPK4P57078 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.01□□□□□ -2.41
RIPK4P57078 RNU6-382P-201ENST00000365181 106 ntBASIC-0.02□□□□□ -2.41
RIPK4P57078 MIR519C-201ENST00000385053 87 ntBASIC-0.02□□□□□ -2.41
RIPK4P57078 SNORA49-201ENST00000386157 136 ntBASIC-0.02□□□□□ -2.41
RIPK4P57078 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
RIPK4P57078 MTATP6P29-201ENST00000415057 132 ntBASIC-0.02□□□□□ -2.41
RIPK4P57078 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.02□□□□□ -2.41
RIPK4P57078 SNORA40.17-201ENST00000517256 115 ntBASIC-0.02□□□□□ -2.41
RIPK4P57078 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.03□□□□□ -2.41
RIPK4P57078 RNU6-990P-201ENST00000364385 104 ntBASIC-0.03□□□□□ -2.41
RIPK4P57078 SNORA75.1-201ENST00000391130 148 ntBASIC-0.03□□□□□ -2.41
RIPK4P57078 Z95118.1-201ENST00000421372 247 ntBASIC-0.03□□□□□ -2.41
RIPK4P57078 RNU6-758P-201ENST00000516292 89 ntBASIC-0.03□□□□□ -2.41
RIPK4P57078 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.03□□□□□ -2.41
RIPK4P57078 MIR4743-201ENST00000584576 69 ntBASIC-0.03□□□□□ -2.41
RIPK4P57078 MIR6507-201ENST00000613630 70 ntBASIC-0.03□□□□□ -2.41
RIPK4P57078 MIR548BB-201ENST00000626714 66 ntBASIC-0.03□□□□□ -2.41
RIPK4P57078 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.04□□□□□ -2.42
RIPK4P57078 RNU6-675P-201ENST00000384236 104 ntBASIC-0.04□□□□□ -2.42
RIPK4P57078 MIR548E-201ENST00000408287 88 ntBASIC-0.04□□□□□ -2.42
RIPK4P57078 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.04□□□□□ -2.42
RIPK4P57078 AC145423.2-201ENST00000610631 239 ntBASIC-0.04□□□□□ -2.42
RIPK4P57078 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.04□□□□□ -2.42
RIPK4P57078 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.05□□□□□ -2.42
RIPK4P57078 SNORD114-29-201ENST00000364819 70 ntBASIC-0.05□□□□□ -2.42
RIPK4P57078 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.05□□□□□ -2.42
RIPK4P57078 CR383656.4-201ENST00000546909 122 ntBASIC-0.05□□□□□ -2.42
RIPK4P57078 AP001180.6-201ENST00000584918 159 ntBASIC-0.05□□□□□ -2.42
RIPK4P57078 MIR655-201ENST00000362159 97 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 267.9 ms