Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MIR548A3-201ENST00000385297 97 ntBASIC-0.47□□□□□ -2.48
VCPP55072 AL445193.1-201ENST00000441183 141 ntBASIC-0.47□□□□□ -2.48
VCPP55072 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.47□□□□□ -2.48
VCPP55072 SNORD33.1-201ENST00000516213 88 ntBASIC-0.47□□□□□ -2.48
VCPP55072 RNU6-659P-201ENST00000516454 104 ntBASIC-0.47□□□□□ -2.48
VCPP55072 RNA5SP66-201ENST00000517178 101 ntBASIC-0.47□□□□□ -2.48
VCPP55072 AL513043.2-201ENST00000573941 143 ntBASIC-0.47□□□□□ -2.48
VCPP55072 MIR4536-1-201ENST00000583537 88 ntBASIC-0.47□□□□□ -2.48
VCPP55072 SNORD45B-201ENST00000364617 72 ntBASIC-0.48□□□□□ -2.49
VCPP55072 SNORD90-201ENST00000391145 111 ntBASIC-0.48□□□□□ -2.49
VCPP55072 U3.27-201ENST00000391237 200 ntBASIC-0.48□□□□□ -2.49
VCPP55072 RNU7-85P-201ENST00000458851 63 ntBASIC-0.48□□□□□ -2.49
VCPP55072 SNORA40.17-201ENST00000517256 115 ntBASIC-0.48□□□□□ -2.49
VCPP55072 uc_338.36-201ENST00000622331 158 ntBASIC-0.48□□□□□ -2.49
VCPP55072 RNU6-502P-201ENST00000362419 108 ntBASIC-0.49□□□□□ -2.49
VCPP55072 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.49□□□□□ -2.49
VCPP55072 RNU6-900P-201ENST00000384498 102 ntBASIC-0.49□□□□□ -2.49
VCPP55072 RNU6-721P-201ENST00000410155 105 ntBASIC-0.49□□□□□ -2.49
VCPP55072 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.49□□□□□ -2.49
VCPP55072 MIR3671-201ENST00000580455 88 ntBASIC-0.49□□□□□ -2.49
VCPP55072 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.5□□□□□ -2.49
VCPP55072 RNU6-132P-201ENST00000383863 107 ntBASIC-0.5□□□□□ -2.49
VCPP55072 RNU6-10P-201ENST00000384036 107 ntBASIC-0.5□□□□□ -2.49
VCPP55072 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.5□□□□□ -2.49
VCPP55072 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.51□□□□□ -2.49
VCPP55072 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.51□□□□□ -2.49
VCPP55072 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
VCPP55072 RNU6-337P-201ENST00000391243 106 ntBASIC-0.51□□□□□ -2.49
VCPP55072 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.51□□□□□ -2.49
VCPP55072 RNU6-719P-201ENST00000516671 104 ntBASIC-0.51□□□□□ -2.49
VCPP55072 MIR6851-201ENST00000617060 67 ntBASIC-0.51□□□□□ -2.49
VCPP55072 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.51□□□□□ -2.49
VCPP55072 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.52□□□□□ -2.49
VCPP55072 SNORD115-25-201ENST00000362619 82 ntBASIC-0.52□□□□□ -2.49
VCPP55072 RNU6-209P-201ENST00000384118 107 ntBASIC-0.52□□□□□ -2.49
VCPP55072 RNU6-813P-201ENST00000384691 107 ntBASIC-0.52□□□□□ -2.49
VCPP55072 RNU6-644P-201ENST00000391155 98 ntBASIC-0.52□□□□□ -2.49
VCPP55072 SNORA3B-201ENST00000391305 131 ntBASIC-0.52□□□□□ -2.49
VCPP55072 MIR3140-201ENST00000583685 90 ntBASIC-0.52□□□□□ -2.49
VCPP55072 MIR548Z-201ENST00000584743 97 ntBASIC-0.52□□□□□ -2.49
VCPP55072 AC103810.7-201ENST00000607821 91 ntBASIC-0.52□□□□□ -2.49
VCPP55072 AC090617.8-201ENST00000623339 167 ntBASIC-0.52□□□□□ -2.49
VCPP55072 MIR548I1-201ENST00000408810 149 ntBASIC-0.53□□□□□ -2.49
VCPP55072 MIR6738-201ENST00000619620 64 ntBASIC-0.53□□□□□ -2.49
VCPP55072 MIR365A-201ENST00000362260 87 ntBASIC-0.54□□□□□ -2.5
VCPP55072 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.54□□□□□ -2.5
VCPP55072 SNORD114-14-201ENST00000362723 75 ntBASIC-0.54□□□□□ -2.5
VCPP55072 SNORD114-4-201ENST00000363962 75 ntBASIC-0.54□□□□□ -2.5
VCPP55072 RNU4-36P-201ENST00000364294 144 ntBASIC-0.54□□□□□ -2.5
VCPP55072 RNU6-990P-201ENST00000364385 104 ntBASIC-0.54□□□□□ -2.5
VCPP55072 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.54□□□□□ -2.5
VCPP55072 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.54□□□□□ -2.5
VCPP55072 SNORA24B-201ENST00000384176 131 ntBASIC-0.54□□□□□ -2.5
VCPP55072 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.54□□□□□ -2.5
VCPP55072 RNU6-905P-201ENST00000384434 107 ntBASIC-0.54□□□□□ -2.5
VCPP55072 AC093726.3-201ENST00000637588 150 ntBASIC-0.54□□□□□ -2.5
VCPP55072 SNORD116-14-201ENST00000383894 92 ntBASIC-0.55□□□□□ -2.5
VCPP55072 SNORD116-17-201ENST00000383929 92 ntBASIC-0.55□□□□□ -2.5
VCPP55072 SNORD116-15-201ENST00000384445 92 ntBASIC-0.55□□□□□ -2.5
VCPP55072 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.55□□□□□ -2.5
VCPP55072 SNORD116-19-201ENST00000384729 92 ntBASIC-0.55□□□□□ -2.5
VCPP55072 RNU6-592P-201ENST00000411333 103 ntBASIC-0.55□□□□□ -2.5
VCPP55072 FGF7P7-201ENST00000514120 227 ntBASIC-0.55□□□□□ -2.5
VCPP55072 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.55□□□□□ -2.5
VCPP55072 MIR3668-201ENST00000582138 75 ntBASIC-0.55□□□□□ -2.5
VCPP55072 MIR3133-201ENST00000583157 78 ntBASIC-0.55□□□□□ -2.5
VCPP55072 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.56□□□□□ -2.5
VCPP55072 MIR548U-201ENST00000390728 81 ntBASIC-0.56□□□□□ -2.5
VCPP55072 MIR4777-201ENST00000583710 86 ntBASIC-0.56□□□□□ -2.5
VCPP55072 SNORD115-23-201ENST00000364461 82 ntBASIC-0.57□□□□□ -2.5
VCPP55072 RNU6-973P-201ENST00000364690 107 ntBASIC-0.57□□□□□ -2.5
VCPP55072 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.57□□□□□ -2.5
VCPP55072 RNU6-880P-201ENST00000384526 107 ntBASIC-0.57□□□□□ -2.5
VCPP55072 SNORD2-201ENST00000459163 69 ntBASIC-0.57□□□□□ -2.5
VCPP55072 RNU6-412P-201ENST00000516434 106 ntBASIC-0.57□□□□□ -2.5
VCPP55072 RNU6-704P-201ENST00000364162 103 ntBASIC-0.58□□□□□ -2.5
VCPP55072 RNA5SP292-201ENST00000390974 118 ntBASIC-0.58□□□□□ -2.5
VCPP55072 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
VCPP55072 SNORD4B-201ENST00000459083 72 ntBASIC-0.58□□□□□ -2.5
VCPP55072 RNU6-795P-201ENST00000516323 103 ntBASIC-0.58□□□□□ -2.5
VCPP55072 MIR6773-201ENST00000612812 74 ntBASIC-0.58□□□□□ -2.5
VCPP55072 RNU6-495P-201ENST00000362995 107 ntBASIC-0.59□□□□□ -2.5
VCPP55072 SNORD116-21-201ENST00000384507 92 ntBASIC-0.59□□□□□ -2.5
VCPP55072 AL500527.2-201ENST00000454105 95 ntBASIC-0.59□□□□□ -2.5
VCPP55072 SNORD22.1-201ENST00000516331 125 ntBASIC-0.59□□□□□ -2.5
VCPP55072 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.59□□□□□ -2.5
VCPP55072 MIR4464-201ENST00000580818 92 ntBASIC-0.59□□□□□ -2.5
VCPP55072 MIR3064-201ENST00000581130 66 ntBASIC-0.59□□□□□ -2.5
VCPP55072 AC012531.4-201ENST00000616509 177 ntBASIC-0.59□□□□□ -2.5
VCPP55072 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.6□□□□□ -2.51
VCPP55072 SNORA63.2-201ENST00000362603 126 ntBASIC-0.6□□□□□ -2.51
VCPP55072 RNU6-774P-201ENST00000363238 107 ntBASIC-0.6□□□□□ -2.51
VCPP55072 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.6□□□□□ -2.51
VCPP55072 RNU6-901P-201ENST00000384593 106 ntBASIC-0.6□□□□□ -2.51
VCPP55072 RNU6-519P-201ENST00000410590 108 ntBASIC-0.6□□□□□ -2.51
VCPP55072 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.6□□□□□ -2.51
VCPP55072 AC104996.3-201ENST00000590718 94 ntBASIC-0.6□□□□□ -2.51
VCPP55072 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.61□□□□□ -2.51
VCPP55072 RNU6-746P-201ENST00000384112 109 ntBASIC-0.61□□□□□ -2.51
VCPP55072 MIRLET7B-201ENST00000385140 83 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms