Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 RNU6-880P-201ENST00000384526 107 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 snoU13.13-201ENST00000458842 104 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 SCARNA23-201ENST00000516060 130 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 RNU6-65P-201ENST00000516332 98 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 RNU6-589P-201ENST00000516485 107 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 SNORA18.5-201ENST00000516616 101 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 MIR3668-201ENST00000582138 75 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 MIR8068-201ENST00000618032 68 ntBASIC-0.28□□□□□ -2.45
LIG4P49917 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.29□□□□□ -2.46
LIG4P49917 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.29□□□□□ -2.46
LIG4P49917 AC096531.1-201ENST00000419107 107 ntBASIC-0.29□□□□□ -2.46
LIG4P49917 RNU7-24P-201ENST00000458867 62 ntBASIC-0.29□□□□□ -2.46
LIG4P49917 SNORD126-201ENST00000459475 77 ntBASIC-0.29□□□□□ -2.46
LIG4P49917 MIR4432-201ENST00000581823 84 ntBASIC-0.29□□□□□ -2.46
LIG4P49917 MIR4802-201ENST00000581881 80 ntBASIC-0.29□□□□□ -2.46
LIG4P49917 MIR4436A-201ENST00000585278 85 ntBASIC-0.29□□□□□ -2.46
LIG4P49917 MIR6129-201ENST00000616087 109 ntBASIC-0.29□□□□□ -2.46
LIG4P49917 RNA5SP275-201ENST00000363936 118 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 SNORD115-23-201ENST00000364461 82 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 SNORD14C-201ENST00000365382 88 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 MIR216B-201ENST00000390186 82 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 RNU7-61P-201ENST00000515897 61 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 MIR4636-201ENST00000582271 80 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 MIR5704-201ENST00000584029 77 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 MIR6773-201ENST00000612812 74 ntBASIC-0.3□□□□□ -2.46
LIG4P49917 SNORD115-27-201ENST00000364430 82 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 RNU6-382P-201ENST00000365181 106 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 SNORD113-1-201ENST00000365321 69 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
LIG4P49917 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 RNU6-887P-201ENST00000410660 100 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 RNU6-592P-201ENST00000411333 103 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.31□□□□□ -2.46
LIG4P49917 RNU7-153P-201ENST00000516455 62 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 RNU6-62P-201ENST00000516526 102 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 RNA5SP395-201ENST00000516567 118 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 SNORD38.3-201ENST00000516599 73 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 MIR6851-201ENST00000617060 67 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 AL391099.1-201ENST00000624635 187 ntBASIC-0.31□□□□□ -2.46
LIG4P49917 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.32□□□□□ -2.46
LIG4P49917 RNU4-36P-201ENST00000364294 144 ntBASIC-0.32□□□□□ -2.46
LIG4P49917 RNU6-22P-201ENST00000384355 107 ntBASIC-0.32□□□□□ -2.46
LIG4P49917 MIRLET7B-201ENST00000385140 83 ntBASIC-0.32□□□□□ -2.46
LIG4P49917 SNORD75.2-201ENST00000408784 58 ntBASIC-0.32□□□□□ -2.46
LIG4P49917 RNU6-519P-201ENST00000410590 108 ntBASIC-0.32□□□□□ -2.46
LIG4P49917 RNA5SP66-201ENST00000517178 101 ntBASIC-0.32□□□□□ -2.46
LIG4P49917 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.32□□□□□ -2.46
LIG4P49917 RNU6-973P-201ENST00000364690 107 ntBASIC-0.33□□□□□ -2.46
LIG4P49917 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.33□□□□□ -2.46
LIG4P49917 RNU6-497P-201ENST00000365316 104 ntBASIC-0.33□□□□□ -2.46
LIG4P49917 RNU6-972P-201ENST00000391208 107 ntBASIC-0.33□□□□□ -2.46
LIG4P49917 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.33□□□□□ -2.46
LIG4P49917 RNU6-162P-201ENST00000516228 103 ntBASIC-0.33□□□□□ -2.46
LIG4P49917 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.33□□□□□ -2.46
LIG4P49917 MIR4464-201ENST00000580818 92 ntBASIC-0.33□□□□□ -2.46
LIG4P49917 MIR3910-1-201ENST00000580936 111 ntBASIC-0.33□□□□□ -2.46
LIG4P49917 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.34□□□□□ -2.46
LIG4P49917 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.34□□□□□ -2.46
LIG4P49917 MIR548U-201ENST00000390728 81 ntBASIC-0.34□□□□□ -2.46
LIG4P49917 RNU6-721P-201ENST00000410155 105 ntBASIC-0.34□□□□□ -2.46
LIG4P49917 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.34□□□□□ -2.46
LIG4P49917 RNU6-284P-201ENST00000411105 106 ntBASIC-0.34□□□□□ -2.46
LIG4P49917 AC008267.6-201ENST00000441664 139 ntBASIC-0.34□□□□□ -2.46
LIG4P49917 U7.3-201ENST00000616123 62 ntBASIC-0.34□□□□□ -2.46
LIG4P49917 uc_338.36-201ENST00000622331 158 ntBASIC-0.34□□□□□ -2.46
LIG4P49917 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.34□□□□□ -2.46
LIG4P49917 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 RNU4-32P-201ENST00000363404 141 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 SNORA63.6-201ENST00000364921 119 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 RNU6-905P-201ENST00000384434 107 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 RNY4P18-201ENST00000391107 89 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 MIR1265-201ENST00000408444 86 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 AL445193.1-201ENST00000441183 141 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 RNU6-412P-201ENST00000516434 106 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 MIR4645-201ENST00000583158 77 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 MIR4263-201ENST00000584745 83 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 AP001180.6-201ENST00000584918 159 ntBASIC-0.35□□□□□ -2.47
LIG4P49917 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.35□□□□□ -2.47
LIG4P49917 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.36□□□□□ -2.47
LIG4P49917 SNORD116-10-201ENST00000363791 102 ntBASIC-0.36□□□□□ -2.47
LIG4P49917 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.36□□□□□ -2.47
LIG4P49917 MTATP8P2-201ENST00000435212 202 ntBASIC-0.36□□□□□ -2.47
LIG4P49917 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.36□□□□□ -2.47
LIG4P49917 U6.81-201ENST00000612550 106 ntBASIC-0.36□□□□□ -2.47
LIG4P49917 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.36□□□□□ -2.47
LIG4P49917 RNU6-766P-201ENST00000362478 107 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 SNORD114-14-201ENST00000362723 75 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 SNORD114-4-201ENST00000363962 75 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 MIR203A-201ENST00000384836 110 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 RNU6-158P-201ENST00000517104 100 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 MIR4796-201ENST00000580742 81 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 MIR3657-201ENST00000584818 117 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 AC093726.3-201ENST00000637588 150 ntBASIC-0.37□□□□□ -2.47
LIG4P49917 RNU6-834P-201ENST00000362367 110 ntBASIC-0.38□□□□□ -2.47
LIG4P49917 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 355.3 ms