Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR548U-201ENST00000390728 81 ntBASIC-0.74□□□□□ -2.53
CXCL12P48061 RNU6-644P-201ENST00000391155 98 ntBASIC-0.74□□□□□ -2.53
CXCL12P48061 RNU6-495P-201ENST00000362995 107 ntBASIC-0.75□□□□□ -2.53
CXCL12P48061 SNORD4B-201ENST00000459083 72 ntBASIC-0.75□□□□□ -2.53
CXCL12P48061 SNORD33.1-201ENST00000516213 88 ntBASIC-0.75□□□□□ -2.53
CXCL12P48061 MIR548Z-201ENST00000584743 97 ntBASIC-0.75□□□□□ -2.53
CXCL12P48061 MIR3914-2-201ENST00000637339 95 ntBASIC-0.75□□□□□ -2.53
CXCL12P48061 SNORD75.1-201ENST00000408373 60 ntBASIC-0.76□□□□□ -2.53
CXCL12P48061 AC104996.3-201ENST00000590718 94 ntBASIC-0.76□□□□□ -2.53
CXCL12P48061 MIR6773-201ENST00000612812 74 ntBASIC-0.76□□□□□ -2.53
CXCL12P48061 MIR8068-201ENST00000618032 68 ntBASIC-0.76□□□□□ -2.53
CXCL12P48061 SNORA63.6-201ENST00000364921 119 ntBASIC-0.77□□□□□ -2.53
CXCL12P48061 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.77□□□□□ -2.53
CXCL12P48061 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.77□□□□□ -2.53
CXCL12P48061 MIR518B-201ENST00000385127 83 ntBASIC-0.77□□□□□ -2.53
CXCL12P48061 RNU6-795P-201ENST00000516323 103 ntBASIC-0.77□□□□□ -2.53
CXCL12P48061 RNU6-255P-201ENST00000516957 105 ntBASIC-0.77□□□□□ -2.53
CXCL12P48061 MIR4777-201ENST00000583710 86 ntBASIC-0.77□□□□□ -2.53
CXCL12P48061 RNU6-990P-201ENST00000364385 104 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 SNORA24B-201ENST00000384176 131 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 RNU6-721P-201ENST00000410155 105 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.78□□□□□ -2.53
CXCL12P48061 SNORA13-201ENST00000458790 133 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 MIR3179-1-201ENST00000578940 84 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 MIR3179-2-201ENST00000579107 84 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 MIR3179-3-201ENST00000579566 84 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 MIR6854-201ENST00000614935 69 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 MIR3179-4-201ENST00000617599 84 ntBASIC-0.78□□□□□ -2.53
CXCL12P48061 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 MIR548A3-201ENST00000385297 97 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 RNA5SP292-201ENST00000390974 118 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 SNORD90-201ENST00000391145 111 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 RNU6-337P-201ENST00000391243 106 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 RNU6-519P-201ENST00000410590 108 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 SNORD22.1-201ENST00000516331 125 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 AC012531.4-201ENST00000616509 177 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 snoR1.1-201ENST00000628177 80 ntBASIC-0.79□□□□□ -2.54
CXCL12P48061 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.8□□□□□ -2.54
CXCL12P48061 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.8□□□□□ -2.54
CXCL12P48061 AC090425.1-201ENST00000610007 140 ntBASIC-0.8□□□□□ -2.54
CXCL12P48061 RNU4-36P-201ENST00000364294 144 ntBASIC-0.81□□□□□ -2.54
CXCL12P48061 RNY1P5-201ENST00000383890 115 ntBASIC-0.81□□□□□ -2.54
CXCL12P48061 RNU6-80P-201ENST00000384195 107 ntBASIC-0.81□□□□□ -2.54
CXCL12P48061 MIRLET7B-201ENST00000385140 83 ntBASIC-0.81□□□□□ -2.54
CXCL12P48061 RNU6-592P-201ENST00000411333 103 ntBASIC-0.81□□□□□ -2.54
CXCL12P48061 SNX3P1X-201ENST00000414887 175 ntBASIC-0.81□□□□□ -2.54
CXCL12P48061 RNU6-881P-201ENST00000516813 102 ntBASIC-0.81□□□□□ -2.54
CXCL12P48061 U6.95-201ENST00000636931 70 ntBASIC-0.81□□□□□ -2.54
CXCL12P48061 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.82□□□□□ -2.54
CXCL12P48061 SNORD75.2-201ENST00000408784 58 ntBASIC-0.82□□□□□ -2.54
CXCL12P48061 AC021146.9-201ENST00000512503 156 ntBASIC-0.82□□□□□ -2.54
CXCL12P48061 RNU6-659P-201ENST00000516454 104 ntBASIC-0.82□□□□□ -2.54
CXCL12P48061 SNORA18.5-201ENST00000516616 101 ntBASIC-0.82□□□□□ -2.54
CXCL12P48061 SNORD115-23-201ENST00000364461 82 ntBASIC-0.83□□□□□ -2.54
CXCL12P48061 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.83□□□□□ -2.54
CXCL12P48061 RNU6-907P-201ENST00000390924 102 ntBASIC-0.83□□□□□ -2.54
CXCL12P48061 RNU7-24P-201ENST00000458867 62 ntBASIC-0.83□□□□□ -2.54
CXCL12P48061 RNU6-62P-201ENST00000516526 102 ntBASIC-0.83□□□□□ -2.54
CXCL12P48061 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.84□□□□□ -2.54
CXCL12P48061 RNU6-905P-201ENST00000384434 107 ntBASIC-0.84□□□□□ -2.54
CXCL12P48061 SNORA19.1-201ENST00000410656 129 ntBASIC-0.84□□□□□ -2.54
CXCL12P48061 AP000533.3-201ENST00000447704 118 ntBASIC-0.84□□□□□ -2.54
CXCL12P48061 AC022137.1-201ENST00000483735 151 ntBASIC-0.84□□□□□ -2.54
CXCL12P48061 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.85□□□□□ -2.55
CXCL12P48061 SNORD74.6-201ENST00000364796 70 ntBASIC-0.85□□□□□ -2.55
CXCL12P48061 MIR517B-201ENST00000385102 67 ntBASIC-0.85□□□□□ -2.55
CXCL12P48061 MTATP6P29-201ENST00000415057 132 ntBASIC-0.85□□□□□ -2.55
CXCL12P48061 U6.96-201ENST00000636425 70 ntBASIC-0.85□□□□□ -2.55
CXCL12P48061 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.86□□□□□ -2.55
CXCL12P48061 RNU4-32P-201ENST00000363404 141 ntBASIC-0.86□□□□□ -2.55
CXCL12P48061 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.86□□□□□ -2.55
CXCL12P48061 RNU6-382P-201ENST00000365181 106 ntBASIC-0.86□□□□□ -2.55
CXCL12P48061 SNORD58A-201ENST00000383875 65 ntBASIC-0.86□□□□□ -2.55
CXCL12P48061 snosnR66.1-201ENST00000391095 99 ntBASIC-0.86□□□□□ -2.55
CXCL12P48061 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.86□□□□□ -2.55
CXCL12P48061 MIR548I1-201ENST00000408810 149 ntBASIC-0.86□□□□□ -2.55
CXCL12P48061 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.86□□□□□ -2.55
CXCL12P48061 MIR1468-201ENST00000410600 86 ntBASIC-0.87□□□□□ -2.55
CXCL12P48061 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.87□□□□□ -2.55
CXCL12P48061 SCARNA23-201ENST00000516060 130 ntBASIC-0.87□□□□□ -2.55
CXCL12P48061 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.87□□□□□ -2.55
CXCL12P48061 AC006254.2-201ENST00000603259 279 ntBASIC-0.87□□□□□ -2.55
CXCL12P48061 AC090617.8-201ENST00000623339 167 ntBASIC-0.87□□□□□ -2.55
CXCL12P48061 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.88□□□□□ -2.55
CXCL12P48061 RNU6-260P-201ENST00000384092 107 ntBASIC-0.88□□□□□ -2.55
CXCL12P48061 RNU6-880P-201ENST00000384526 107 ntBASIC-0.88□□□□□ -2.55
CXCL12P48061 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.88□□□□□ -2.55
CXCL12P48061 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
CXCL12P48061 RNU6-904P-201ENST00000516206 101 ntBASIC-0.88□□□□□ -2.55
CXCL12P48061 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.88□□□□□ -2.55
CXCL12P48061 MIR4773-1-201ENST00000637203 78 ntBASIC-0.88□□□□□ -2.55
CXCL12P48061 SNORD116-21-201ENST00000384507 92 ntBASIC-0.89□□□□□ -2.55
CXCL12P48061 RNU6-972P-201ENST00000391208 107 ntBASIC-0.89□□□□□ -2.55
CXCL12P48061 RNU6-887P-201ENST00000410660 100 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms