Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RNU6-394P-201ENST00000410735 107 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 MTND3P2-201ENST00000438452 342 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 AC004792.1-201ENST00000614523 137 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 MIR124-2-201ENST00000385081 109 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 SNORD64-201ENST00000386683 67 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
BRCA1P38398 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 RNU6-388P-201ENST00000517012 105 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 RNU6-389P-201ENST00000517048 105 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 MIR378F-201ENST00000578143 78 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 MIR3144-201ENST00000579460 79 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 MIR4503-201ENST00000582187 83 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 MIR4439-201ENST00000583746 80 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 MIR6738-201ENST00000619620 64 ntBASIC-1.03□□□□□ -2.57
BRCA1P38398 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.04□□□□□ -2.58
BRCA1P38398 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.04□□□□□ -2.58
BRCA1P38398 RNU6-260P-201ENST00000384092 107 ntBASIC-1.04□□□□□ -2.58
BRCA1P38398 MIR203A-201ENST00000384836 110 ntBASIC-1.04□□□□□ -2.58
BRCA1P38398 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.04□□□□□ -2.58
BRCA1P38398 MIR3140-201ENST00000583685 90 ntBASIC-1.04□□□□□ -2.58
BRCA1P38398 MIR6739-201ENST00000622461 75 ntBASIC-1.04□□□□□ -2.58
BRCA1P38398 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 RNU6-426P-201ENST00000516464 97 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.05□□□□□ -2.58
BRCA1P38398 RNU6-208P-201ENST00000362431 107 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 SNORD58C-201ENST00000365223 64 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 SNORA62.4-201ENST00000365504 151 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 RNU6-24P-201ENST00000384440 107 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 snoU13.17-201ENST00000458802 104 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 RNA5SP272-201ENST00000516095 111 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 MIR548X2-201ENST00000579776 100 ntBASIC-1.05□□□□□ -2.58
BRCA1P38398 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.06□□□□□ -2.58
BRCA1P38398 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.06□□□□□ -2.58
BRCA1P38398 MIR4694-201ENST00000578534 80 ntBASIC-1.06□□□□□ -2.58
BRCA1P38398 AC090617.8-201ENST00000623339 167 ntBASIC-1.06□□□□□ -2.58
BRCA1P38398 SNORD116-18-201ENST00000383961 92 ntBASIC-1.07□□□□□ -2.58
BRCA1P38398 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
BRCA1P38398 AL353813.1-201ENST00000440700 253 ntBASIC-1.07□□□□□ -2.58
BRCA1P38398 AL691482.2-201ENST00000457453 84 ntBASIC-1.07□□□□□ -2.58
BRCA1P38398 MIR4306-201ENST00000583390 91 ntBASIC-1.07□□□□□ -2.58
BRCA1P38398 RNA5SP292-201ENST00000390974 118 ntBASIC-1.07□□□□□ -2.58
BRCA1P38398 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.07□□□□□ -2.58
BRCA1P38398 MIR4320-201ENST00000636981 65 ntBASIC-1.07□□□□□ -2.58
BRCA1P38398 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.08□□□□□ -2.58
BRCA1P38398 SNORA63.6-201ENST00000364921 119 ntBASIC-1.08□□□□□ -2.58
BRCA1P38398 RNU6-431P-201ENST00000383874 107 ntBASIC-1.08□□□□□ -2.58
BRCA1P38398 MT-TG-201ENST00000387429 68 ntBASIC-1.08□□□□□ -2.58
BRCA1P38398 RNU6-592P-201ENST00000411333 103 ntBASIC-1.08□□□□□ -2.58
BRCA1P38398 MIR548Z-201ENST00000584743 97 ntBASIC-1.08□□□□□ -2.58
BRCA1P38398 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 SNORD58A-201ENST00000383875 65 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 RNU6-772P-201ENST00000516042 105 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 RNY3P2-201ENST00000362918 102 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 SNORD114-17-201ENST00000364699 75 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 RNU6-200P-201ENST00000364743 107 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 MIR1255B2-201ENST00000408618 67 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 FGF7P7-201ENST00000514120 227 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 MIR3657-201ENST00000584818 117 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 AL445584.3-201ENST00000617173 78 ntBASIC-1.09□□□□□ -2.58
BRCA1P38398 SNORA24B-201ENST00000384176 131 ntBASIC-1.1□□□□□ -2.59
BRCA1P38398 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.1□□□□□ -2.59
BRCA1P38398 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.1□□□□□ -2.59
BRCA1P38398 AC140658.3-201ENST00000567603 271 ntBASIC-1.1□□□□□ -2.59
BRCA1P38398 MIR382-201ENST00000637119 76 ntBASIC-1.1□□□□□ -2.59
BRCA1P38398 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.11□□□□□ -2.59
BRCA1P38398 RNU6-644P-201ENST00000391155 98 ntBASIC-1.11□□□□□ -2.59
BRCA1P38398 MIR4324-201ENST00000584846 72 ntBASIC-1.11□□□□□ -2.59
BRCA1P38398 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.12□□□□□ -2.59
BRCA1P38398 RNU6-519P-201ENST00000410590 108 ntBASIC-1.12□□□□□ -2.59
BRCA1P38398 MTND4LP9-201ENST00000427694 174 ntBASIC-1.12□□□□□ -2.59
BRCA1P38398 RNA5SP147-201ENST00000516493 109 ntBASIC-1.12□□□□□ -2.59
BRCA1P38398 MIR5009-201ENST00000578736 100 ntBASIC-1.12□□□□□ -2.59
BRCA1P38398 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.12□□□□□ -2.59
BRCA1P38398 RNU6-924P-201ENST00000362926 108 ntBASIC-1.12□□□□□ -2.59
BRCA1P38398 SNORA19.1-201ENST00000410656 129 ntBASIC-1.12□□□□□ -2.59
BRCA1P38398 U6.96-201ENST00000636425 70 ntBASIC-1.12□□□□□ -2.59
BRCA1P38398 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.13□□□□□ -2.59
BRCA1P38398 RNU6-274P-201ENST00000459566 107 ntBASIC-1.13□□□□□ -2.59
BRCA1P38398 SNORA18.5-201ENST00000516616 101 ntBASIC-1.13□□□□□ -2.59
BRCA1P38398 MIR3064-201ENST00000581130 66 ntBASIC-1.13□□□□□ -2.59
BRCA1P38398 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.14□□□□□ -2.59
BRCA1P38398 RNU6-990P-201ENST00000364385 104 ntBASIC-1.14□□□□□ -2.59
BRCA1P38398 AC021146.9-201ENST00000512503 156 ntBASIC-1.14□□□□□ -2.59
BRCA1P38398 RNA5SP461-201ENST00000516451 104 ntBASIC-1.14□□□□□ -2.59
BRCA1P38398 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.14□□□□□ -2.59
BRCA1P38398 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.15□□□□□ -2.59
BRCA1P38398 RNU6-694P-201ENST00000364071 147 ntBASIC-1.15□□□□□ -2.59
BRCA1P38398 MIR548A1-201ENST00000385041 97 ntBASIC-1.15□□□□□ -2.59
BRCA1P38398 MIR4499-201ENST00000584834 69 ntBASIC-1.15□□□□□ -2.59
BRCA1P38398 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.15□□□□□ -2.59
BRCA1P38398 MIR521-2-201ENST00000384818 87 ntBASIC-1.16□□□□□ -2.59
BRCA1P38398 AL353803.5-201ENST00000599815 141 ntBASIC-1.16□□□□□ -2.59
BRCA1P38398 MIR365A-201ENST00000362260 87 ntBASIC-1.16□□□□□ -2.6
BRCA1P38398 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms