Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RPS29P8-201ENST00000445109 171 ntBASIC-0.42□□□□□ -2.48
ABCD3P28288 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.42□□□□□ -2.48
ABCD3P28288 MIR548Z-201ENST00000584743 97 ntBASIC-0.42□□□□□ -2.48
ABCD3P28288 MIR4436A-201ENST00000585278 85 ntBASIC-0.42□□□□□ -2.48
ABCD3P28288 AL590491.3-201ENST00000610731 82 ntBASIC-0.42□□□□□ -2.48
ABCD3P28288 MIR6507-201ENST00000613630 70 ntBASIC-0.42□□□□□ -2.48
ABCD3P28288 MIR4788-201ENST00000639104 80 ntBASIC-0.42□□□□□ -2.48
ABCD3P28288 SNORD14C-201ENST00000365382 88 ntBASIC-0.43□□□□□ -2.48
ABCD3P28288 SNORD2-201ENST00000459163 69 ntBASIC-0.43□□□□□ -2.48
ABCD3P28288 RNU6-479P-201ENST00000516348 105 ntBASIC-0.43□□□□□ -2.48
ABCD3P28288 MIR3064-201ENST00000581130 66 ntBASIC-0.43□□□□□ -2.48
ABCD3P28288 AC104996.3-201ENST00000590718 94 ntBASIC-0.43□□□□□ -2.48
ABCD3P28288 MIR548AZ-201ENST00000616567 95 ntBASIC-0.43□□□□□ -2.48
ABCD3P28288 AC132825.6-201ENST00000638861 357 ntBASIC-0.43□□□□□ -2.48
ABCD3P28288 RNU6-811P-201ENST00000384069 107 ntBASIC-0.44□□□□□ -2.48
ABCD3P28288 MIR224-201ENST00000384889 81 ntBASIC-0.44□□□□□ -2.48
ABCD3P28288 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
ABCD3P28288 SNORA19.1-201ENST00000410656 129 ntBASIC-0.44□□□□□ -2.48
ABCD3P28288 RNU6-284P-201ENST00000411105 106 ntBASIC-0.44□□□□□ -2.48
ABCD3P28288 AC114755.3-201ENST00000481111 251 ntBASIC-0.44□□□□□ -2.48
ABCD3P28288 FGF7P7-201ENST00000514120 227 ntBASIC-0.44□□□□□ -2.48
ABCD3P28288 SNORA63.2-201ENST00000362603 126 ntBASIC-0.45□□□□□ -2.48
ABCD3P28288 SNORD95.1-201ENST00000364099 68 ntBASIC-0.45□□□□□ -2.48
ABCD3P28288 RNU6-132P-201ENST00000383863 107 ntBASIC-0.45□□□□□ -2.48
ABCD3P28288 uc_338.36-201ENST00000622331 158 ntBASIC-0.45□□□□□ -2.48
ABCD3P28288 SNORD116-10-201ENST00000363791 102 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 RNU6-54P-201ENST00000365563 107 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 SNORD58A-201ENST00000383875 65 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 SNORA32.3-201ENST00000384772 121 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 RNU6-313P-201ENST00000516317 112 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 RNA5SP169-201ENST00000517268 117 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 MIR3910-1-201ENST00000580936 111 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 AL391099.1-201ENST00000624635 187 ntBASIC-0.46□□□□□ -2.48
ABCD3P28288 SNORD75.1-201ENST00000408373 60 ntBASIC-0.47□□□□□ -2.48
ABCD3P28288 MIR4432-201ENST00000581823 84 ntBASIC-0.47□□□□□ -2.48
ABCD3P28288 MIR6129-201ENST00000616087 109 ntBASIC-0.47□□□□□ -2.48
ABCD3P28288 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.48□□□□□ -2.49
ABCD3P28288 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.48□□□□□ -2.49
ABCD3P28288 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.49□□□□□ -2.49
ABCD3P28288 MIR590-201ENST00000385008 97 ntBASIC-0.49□□□□□ -2.49
ABCD3P28288 RNU6-589P-201ENST00000516485 107 ntBASIC-0.49□□□□□ -2.49
ABCD3P28288 RNU6-537P-201ENST00000517277 103 ntBASIC-0.49□□□□□ -2.49
ABCD3P28288 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.5□□□□□ -2.49
ABCD3P28288 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.5□□□□□ -2.49
ABCD3P28288 RNU6-106P-201ENST00000384405 107 ntBASIC-0.5□□□□□ -2.49
ABCD3P28288 RNU6-554P-201ENST00000410466 106 ntBASIC-0.5□□□□□ -2.49
ABCD3P28288 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.5□□□□□ -2.49
ABCD3P28288 RNU6-719P-201ENST00000516671 104 ntBASIC-0.5□□□□□ -2.49
ABCD3P28288 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.51□□□□□ -2.49
ABCD3P28288 RNU6-762P-201ENST00000517107 102 ntBASIC-0.51□□□□□ -2.49
ABCD3P28288 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.53□□□□□ -2.49
ABCD3P28288 RNU6-455P-201ENST00000384681 107 ntBASIC-0.53□□□□□ -2.49
ABCD3P28288 AL603908.1-201ENST00000406098 201 ntBASIC-0.53□□□□□ -2.49
ABCD3P28288 MTATP6P29-201ENST00000415057 132 ntBASIC-0.53□□□□□ -2.49
ABCD3P28288 RNA5SP67-201ENST00000516422 131 ntBASIC-0.53□□□□□ -2.49
ABCD3P28288 AL627230.5-201ENST00000619807 58 ntBASIC-0.53□□□□□ -2.49
ABCD3P28288 RNU6-766P-201ENST00000362478 107 ntBASIC-0.54□□□□□ -2.5
ABCD3P28288 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.54□□□□□ -2.5
ABCD3P28288 RNU2-51P-201ENST00000410708 197 ntBASIC-0.54□□□□□ -2.5
ABCD3P28288 MIR3681-201ENST00000580089 72 ntBASIC-0.54□□□□□ -2.5
ABCD3P28288 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.55□□□□□ -2.5
ABCD3P28288 SNORD113-1-201ENST00000365321 69 ntBASIC-0.55□□□□□ -2.5
ABCD3P28288 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.55□□□□□ -2.5
ABCD3P28288 SNORA3B-201ENST00000391305 131 ntBASIC-0.55□□□□□ -2.5
ABCD3P28288 RNU7-61P-201ENST00000515897 61 ntBASIC-0.55□□□□□ -2.5
ABCD3P28288 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.55□□□□□ -2.5
ABCD3P28288 SNORD115-25-201ENST00000362619 82 ntBASIC-0.56□□□□□ -2.5
ABCD3P28288 SNORA19-201ENST00000384737 128 ntBASIC-0.56□□□□□ -2.5
ABCD3P28288 RNA5SP292-201ENST00000390974 118 ntBASIC-0.56□□□□□ -2.5
ABCD3P28288 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.56□□□□□ -2.5
ABCD3P28288 SNORD42B-201ENST00000458893 67 ntBASIC-0.56□□□□□ -2.5
ABCD3P28288 SNORA18.5-201ENST00000516616 101 ntBASIC-0.56□□□□□ -2.5
ABCD3P28288 AP000676.1-201ENST00000533307 52 ntBASIC-0.56□□□□□ -2.5
ABCD3P28288 MIR3140-201ENST00000583685 90 ntBASIC-0.56□□□□□ -2.5
ABCD3P28288 RNU6-495P-201ENST00000362995 107 ntBASIC-0.57□□□□□ -2.5
ABCD3P28288 SNORA24B-201ENST00000384176 131 ntBASIC-0.57□□□□□ -2.5
ABCD3P28288 RNU6-900P-201ENST00000384498 102 ntBASIC-0.57□□□□□ -2.5
ABCD3P28288 MIR548E-201ENST00000408287 88 ntBASIC-0.57□□□□□ -2.5
ABCD3P28288 RNU4-32P-201ENST00000363404 141 ntBASIC-0.58□□□□□ -2.5
ABCD3P28288 RNU7-24P-201ENST00000458867 62 ntBASIC-0.58□□□□□ -2.5
ABCD3P28288 RNU6-158P-201ENST00000517104 100 ntBASIC-0.58□□□□□ -2.5
ABCD3P28288 RNU5F-1-201ENST00000362507 117 ntBASIC-0.59□□□□□ -2.5
ABCD3P28288 MIR9-2-201ENST00000384838 87 ntBASIC-0.59□□□□□ -2.5
ABCD3P28288 SNORA49-201ENST00000386157 136 ntBASIC-0.59□□□□□ -2.5
ABCD3P28288 RNU4-63P-201ENST00000411313 118 ntBASIC-0.59□□□□□ -2.5
ABCD3P28288 SNORA40.17-201ENST00000517256 115 ntBASIC-0.59□□□□□ -2.5
ABCD3P28288 SNORD114-14-201ENST00000362723 75 ntBASIC-0.6□□□□□ -2.51
ABCD3P28288 MIR582-201ENST00000365731 98 ntBASIC-0.6□□□□□ -2.51
ABCD3P28288 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
ABCD3P28288 SNORD75.2-201ENST00000408784 58 ntBASIC-0.6□□□□□ -2.51
ABCD3P28288 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.6□□□□□ -2.51
ABCD3P28288 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.6□□□□□ -2.51
ABCD3P28288 RNU6-109P-201ENST00000516364 107 ntBASIC-0.6□□□□□ -2.51
ABCD3P28288 RNU6-184P-201ENST00000516514 107 ntBASIC-0.6□□□□□ -2.51
ABCD3P28288 RNA5SP66-201ENST00000517178 101 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 263.7 ms