Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MIR6779-201ENST00000617283 64 ntBASIC0.41□□□□□ -2.34
ATF4P18848 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
ATF4P18848 MIR193B-201ENST00000384907 83 ntBASIC0.4□□□□□ -2.35
ATF4P18848 Y_RNA.660-201ENST00000516002 120 ntBASIC0.4□□□□□ -2.35
ATF4P18848 RNU6-762P-201ENST00000517107 102 ntBASIC0.4□□□□□ -2.35
ATF4P18848 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
ATF4P18848 MIR499B-201ENST00000636498 73 ntBASIC0.4□□□□□ -2.35
ATF4P18848 RNU6-208P-201ENST00000362431 107 ntBASIC0.39□□□□□ -2.35
ATF4P18848 MIR501-201ENST00000390204 84 ntBASIC0.39□□□□□ -2.35
ATF4P18848 MIR548AD-201ENST00000584780 82 ntBASIC0.39□□□□□ -2.35
ATF4P18848 MIR4315-1-201ENST00000636800 73 ntBASIC0.39□□□□□ -2.35
ATF4P18848 MIR4315-2-201ENST00000640925 73 ntBASIC0.39□□□□□ -2.35
ATF4P18848 RNU6-624P-201ENST00000363411 107 ntBASIC0.38□□□□□ -2.35
ATF4P18848 RNA5SP499-201ENST00000363982 119 ntBASIC0.38□□□□□ -2.35
ATF4P18848 RNU6-54P-201ENST00000365563 107 ntBASIC0.38□□□□□ -2.35
ATF4P18848 RNU6-979P-201ENST00000383896 107 ntBASIC0.38□□□□□ -2.35
ATF4P18848 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
ATF4P18848 snoU13.17-201ENST00000458802 104 ntBASIC0.38□□□□□ -2.35
ATF4P18848 AC108740.1-201ENST00000498629 225 ntBASIC0.38□□□□□ -2.35
ATF4P18848 MIR1273G-201ENST00000577677 100 ntBASIC0.38□□□□□ -2.35
ATF4P18848 MIR4677-201ENST00000584153 80 ntBASIC0.38□□□□□ -2.35
ATF4P18848 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
ATF4P18848 RNA5SP193-201ENST00000410353 107 ntBASIC0.37□□□□□ -2.35
ATF4P18848 MIR924-201ENST00000638017 53 ntBASIC0.37□□□□□ -2.35
ATF4P18848 MIR516B1-201ENST00000385211 90 ntBASIC0.36□□□□□ -2.35
ATF4P18848 SNORA26.2-201ENST00000390922 122 ntBASIC0.36□□□□□ -2.35
ATF4P18848 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
ATF4P18848 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
ATF4P18848 AC084368.1-201ENST00000620935 65 ntBASIC0.36□□□□□ -2.35
ATF4P18848 RNA5SP457-201ENST00000363657 124 ntBASIC0.35□□□□□ -2.35
ATF4P18848 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
ATF4P18848 RNU6-592P-201ENST00000411333 103 ntBASIC0.35□□□□□ -2.35
ATF4P18848 AC062037.1-201ENST00000605302 128 ntBASIC0.35□□□□□ -2.35
ATF4P18848 MIR330-201ENST00000362196 94 ntBASIC0.34□□□□□ -2.36
ATF4P18848 RNU6-495P-201ENST00000362995 107 ntBASIC0.34□□□□□ -2.36
ATF4P18848 RNU6-161P-201ENST00000363051 106 ntBASIC0.34□□□□□ -2.36
ATF4P18848 RNU6-681P-201ENST00000364012 104 ntBASIC0.34□□□□□ -2.36
ATF4P18848 Y_RNA.205-201ENST00000364128 113 ntBASIC0.34□□□□□ -2.36
ATF4P18848 MIR1302-4-201ENST00000408701 150 ntBASIC0.34□□□□□ -2.36
ATF4P18848 SNORD75.2-201ENST00000408784 58 ntBASIC0.34□□□□□ -2.36
ATF4P18848 RNU6-380P-201ENST00000410207 107 ntBASIC0.34□□□□□ -2.36
ATF4P18848 RNU7-24P-201ENST00000458867 62 ntBASIC0.34□□□□□ -2.36
ATF4P18848 RNU7-171P-201ENST00000459581 62 ntBASIC0.34□□□□□ -2.36
ATF4P18848 RNU6-1108P-201ENST00000516308 104 ntBASIC0.34□□□□□ -2.36
ATF4P18848 RNU6-557P-201ENST00000516842 110 ntBASIC0.34□□□□□ -2.36
ATF4P18848 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
ATF4P18848 RNU6-1276P-201ENST00000365372 104 ntBASIC0.33□□□□□ -2.36
ATF4P18848 RNU6-154P-201ENST00000384306 106 ntBASIC0.33□□□□□ -2.36
ATF4P18848 RNU6-129P-201ENST00000391022 107 ntBASIC0.33□□□□□ -2.36
ATF4P18848 RNU6-127P-201ENST00000390897 107 ntBASIC0.32□□□□□ -2.36
ATF4P18848 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.32□□□□□ -2.36
ATF4P18848 RNU6-782P-201ENST00000516852 104 ntBASIC0.32□□□□□ -2.36
ATF4P18848 MIR4773-1-201ENST00000637203 78 ntBASIC0.32□□□□□ -2.36
ATF4P18848 SNORD114-29-201ENST00000364819 70 ntBASIC0.31□□□□□ -2.36
ATF4P18848 Y_RNA.371-201ENST00000365591 113 ntBASIC0.31□□□□□ -2.36
ATF4P18848 SNORA75.1-201ENST00000391130 148 ntBASIC0.31□□□□□ -2.36
ATF4P18848 RNU6-274P-201ENST00000459566 107 ntBASIC0.31□□□□□ -2.36
ATF4P18848 MIR548AE1-201ENST00000583292 70 ntBASIC0.31□□□□□ -2.36
ATF4P18848 MIR892B-201ENST00000401279 77 ntBASIC0.3□□□□□ -2.36
ATF4P18848 RNY4P29-201ENST00000410801 97 ntBASIC0.3□□□□□ -2.36
ATF4P18848 SCARNA17.3-201ENST00000516381 125 ntBASIC0.3□□□□□ -2.36
ATF4P18848 YWHAEP3-201ENST00000582767 121 ntBASIC0.3□□□□□ -2.36
ATF4P18848 RNU6-824P-201ENST00000363724 104 ntBASIC0.29□□□□□ -2.36
ATF4P18848 RNU6-686P-201ENST00000364839 107 ntBASIC0.29□□□□□ -2.36
ATF4P18848 RNU6-382P-201ENST00000365181 106 ntBASIC0.29□□□□□ -2.36
ATF4P18848 MIR610-201ENST00000385139 96 ntBASIC0.29□□□□□ -2.36
ATF4P18848 MIR652-201ENST00000385278 98 ntBASIC0.29□□□□□ -2.36
ATF4P18848 U6.81-201ENST00000612550 106 ntBASIC0.29□□□□□ -2.36
ATF4P18848 MIR4679-1-201ENST00000637619 75 ntBASIC0.29□□□□□ -2.36
ATF4P18848 MIR20A-201ENST00000362279 71 ntBASIC0.28□□□□□ -2.36
ATF4P18848 Y_RNA.12-201ENST00000362393 112 ntBASIC0.28□□□□□ -2.36
ATF4P18848 Y_RNA.606-201ENST00000410579 103 ntBASIC0.28□□□□□ -2.36
ATF4P18848 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
ATF4P18848 RNU6-1152P-201ENST00000384576 107 ntBASIC0.27□□□□□ -2.37
ATF4P18848 MIR643-201ENST00000385267 97 ntBASIC0.27□□□□□ -2.37
ATF4P18848 SNORD42B-201ENST00000458893 67 ntBASIC0.27□□□□□ -2.37
ATF4P18848 Y_RNA.258-201ENST00000364613 105 ntBASIC0.26□□□□□ -2.37
ATF4P18848 SCARNA11.2-201ENST00000517183 154 ntBASIC0.26□□□□□ -2.37
ATF4P18848 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
ATF4P18848 RNU6-340P-201ENST00000364005 107 ntBASIC0.25□□□□□ -2.37
ATF4P18848 Y_RNA.316-201ENST00000365118 111 ntBASIC0.25□□□□□ -2.37
ATF4P18848 AL691482.2-201ENST00000457453 84 ntBASIC0.25□□□□□ -2.37
ATF4P18848 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
ATF4P18848 RNA5SP330-201ENST00000517096 96 ntBASIC0.25□□□□□ -2.37
ATF4P18848 MIR3925-201ENST00000584674 77 ntBASIC0.25□□□□□ -2.37
ATF4P18848 AC244090.1-201ENST00000441884 93 ntBASIC0.24□□□□□ -2.37
ATF4P18848 RNU7-188P-201ENST00000517063 64 ntBASIC0.24□□□□□ -2.37
ATF4P18848 RNU6-315P-201ENST00000362666 107 ntBASIC0.23□□□□□ -2.37
ATF4P18848 RNA5SP325-201ENST00000363756 130 ntBASIC0.23□□□□□ -2.37
ATF4P18848 RNU6-752P-201ENST00000516376 102 ntBASIC0.23□□□□□ -2.37
ATF4P18848 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
ATF4P18848 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
ATF4P18848 MIR876-201ENST00000401147 81 ntBASIC0.22□□□□□ -2.37
ATF4P18848 MIR4666B-201ENST00000578142 81 ntBASIC0.22□□□□□ -2.37
ATF4P18848 MIR4743-201ENST00000584576 69 ntBASIC0.22□□□□□ -2.37
ATF4P18848 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.22□□□□□ -2.37
ATF4P18848 MIRLET7A1-201ENST00000362295 80 ntBASIC0.21□□□□□ -2.38
ATF4P18848 Y_RNA.115-201ENST00000363272 98 ntBASIC0.21□□□□□ -2.38
ATF4P18848 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
ATF4P18848 RNU6-478P-201ENST00000363904 110 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms