Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC079150.2-201ENST00000443733 78 ntBASIC1.58□□□□□ -2.16
CSB-PGBD3P0DP91 AC087343.1-201ENST00000477341 475 ntBASIC1.58□□□□□ -2.16
CSB-PGBD3P0DP91 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CSB-PGBD3P0DP91 SNORD18A-201ENST00000363753 72 ntBASIC1.57□□□□□ -2.16
CSB-PGBD3P0DP91 RNU6-726P-201ENST00000364680 107 ntBASIC1.57□□□□□ -2.16
CSB-PGBD3P0DP91 MT-TY-201ENST00000387409 66 ntBASIC1.57□□□□□ -2.16
CSB-PGBD3P0DP91 MIR548J-201ENST00000408833 112 ntBASIC1.57□□□□□ -2.16
CSB-PGBD3P0DP91 RNU6-542P-201ENST00000516405 103 ntBASIC1.57□□□□□ -2.16
CSB-PGBD3P0DP91 PVT1_3.1-201ENST00000620853 95 ntBASIC1.57□□□□□ -2.16
CSB-PGBD3P0DP91 RNU7-74P-201ENST00000459104 62 ntBASIC1.56□□□□□ -2.16
CSB-PGBD3P0DP91 RNU6-135P-201ENST00000516769 101 ntBASIC1.56□□□□□ -2.16
CSB-PGBD3P0DP91 RNU6-656P-201ENST00000516785 107 ntBASIC1.56□□□□□ -2.16
CSB-PGBD3P0DP91 AC025627.3-201ENST00000582078 182 ntBASIC1.56□□□□□ -2.16
CSB-PGBD3P0DP91 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 RNU6-716P-201ENST00000365621 103 ntBASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 MIR150-201ENST00000385048 84 ntBASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 MIR548L-201ENST00000408303 86 ntBASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 RNU6-469P-201ENST00000516253 101 ntBASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 RNA5SP255-201ENST00000516370 107 ntBASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 RNA5SP47-201ENST00000517230 109 ntBASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 AC068338.1-201ENST00000565567 176 ntBASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 MIR4460-201ENST00000577862 86 ntBASIC1.55□□□□□ -2.16
CSB-PGBD3P0DP91 SNORA2.1-201ENST00000363089 137 ntBASIC1.54□□□□□ -2.16
CSB-PGBD3P0DP91 RNU1-141P-201ENST00000364623 158 ntBASIC1.54□□□□□ -2.16
CSB-PGBD3P0DP91 RNU6-1335P-201ENST00000365426 107 ntBASIC1.54□□□□□ -2.16
CSB-PGBD3P0DP91 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.54□□□□□ -2.16
CSB-PGBD3P0DP91 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
CSB-PGBD3P0DP91 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
CSB-PGBD3P0DP91 RNA5SP192-201ENST00000364404 120 ntBASIC1.53□□□□□ -2.16
CSB-PGBD3P0DP91 RNU6-939P-201ENST00000384634 107 ntBASIC1.53□□□□□ -2.16
CSB-PGBD3P0DP91 MIR3678-201ENST00000578455 94 ntBASIC1.53□□□□□ -2.16
CSB-PGBD3P0DP91 MIR598-201ENST00000384868 97 ntBASIC1.52□□□□□ -2.17
CSB-PGBD3P0DP91 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CSB-PGBD3P0DP91 RNU6-269P-201ENST00000391077 97 ntBASIC1.52□□□□□ -2.17
CSB-PGBD3P0DP91 RNU5B-6P-201ENST00000516765 68 ntBASIC1.52□□□□□ -2.17
CSB-PGBD3P0DP91 AC018659.1-201ENST00000551083 169 ntBASIC1.52□□□□□ -2.17
CSB-PGBD3P0DP91 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.52□□□□□ -2.17
CSB-PGBD3P0DP91 RNU6-829P-201ENST00000363700 112 ntBASIC1.51□□□□□ -2.17
CSB-PGBD3P0DP91 SNORA25.5-201ENST00000363782 126 ntBASIC1.51□□□□□ -2.17
CSB-PGBD3P0DP91 SCARNA21.1-201ENST00000515996 128 ntBASIC1.51□□□□□ -2.17
CSB-PGBD3P0DP91 MIR6739-201ENST00000622461 75 ntBASIC1.51□□□□□ -2.17
CSB-PGBD3P0DP91 RNU6-1079P-201ENST00000362861 110 ntBASIC1.5□□□□□ -2.17
CSB-PGBD3P0DP91 SNORD114-26-201ENST00000363543 72 ntBASIC1.5□□□□□ -2.17
CSB-PGBD3P0DP91 MIR573-201ENST00000384964 99 ntBASIC1.5□□□□□ -2.17
CSB-PGBD3P0DP91 RNA5SP299-201ENST00000391203 116 ntBASIC1.5□□□□□ -2.17
CSB-PGBD3P0DP91 RNA5SP484-201ENST00000458857 111 ntBASIC1.5□□□□□ -2.17
CSB-PGBD3P0DP91 MIR3612-201ENST00000579753 87 ntBASIC1.5□□□□□ -2.17
CSB-PGBD3P0DP91 MIR6779-201ENST00000617283 64 ntBASIC1.5□□□□□ -2.17
CSB-PGBD3P0DP91 RNU6-614P-201ENST00000384369 107 ntBASIC1.49□□□□□ -2.17
CSB-PGBD3P0DP91 snoU13.13-201ENST00000458842 104 ntBASIC1.49□□□□□ -2.17
CSB-PGBD3P0DP91 U6.59-201ENST00000615686 107 ntBASIC1.49□□□□□ -2.17
CSB-PGBD3P0DP91 RNU6-1089P-201ENST00000516473 104 ntBASIC1.47□□□□□ -2.17
CSB-PGBD3P0DP91 SCARNA16.5-201ENST00000517114 183 ntBASIC1.47□□□□□ -2.17
CSB-PGBD3P0DP91 MIR466-201ENST00000580653 84 ntBASIC1.47□□□□□ -2.17
CSB-PGBD3P0DP91 SNORA8.2-201ENST00000384372 139 ntBASIC1.46□□□□□ -2.18
CSB-PGBD3P0DP91 RNU6-141P-201ENST00000410499 105 ntBASIC1.46□□□□□ -2.18
CSB-PGBD3P0DP91 RNA5SP436-201ENST00000516020 115 ntBASIC1.46□□□□□ -2.18
CSB-PGBD3P0DP91 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSB-PGBD3P0DP91 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.45□□□□□ -2.18
CSB-PGBD3P0DP91 RNA5SP325-201ENST00000363756 130 ntBASIC1.45□□□□□ -2.18
CSB-PGBD3P0DP91 SNORD99-201ENST00000408612 74 ntBASIC1.45□□□□□ -2.18
CSB-PGBD3P0DP91 AL157398.1-201ENST00000452981 186 ntBASIC1.45□□□□□ -2.18
CSB-PGBD3P0DP91 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.45□□□□□ -2.18
CSB-PGBD3P0DP91 Y_RNA.236-201ENST00000364427 111 ntBASIC1.44□□□□□ -2.18
CSB-PGBD3P0DP91 MIR4661-201ENST00000582720 75 ntBASIC1.44□□□□□ -2.18
CSB-PGBD3P0DP91 MIR548V-201ENST00000584165 80 ntBASIC1.44□□□□□ -2.18
CSB-PGBD3P0DP91 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.44□□□□□ -2.18
CSB-PGBD3P0DP91 AL162376.1-201ENST00000624117 175 ntBASIC1.44□□□□□ -2.18
CSB-PGBD3P0DP91 RNA5SP215-201ENST00000363440 122 ntBASIC1.43□□□□□ -2.18
CSB-PGBD3P0DP91 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CSB-PGBD3P0DP91 SNORA75.1-201ENST00000391130 148 ntBASIC1.43□□□□□ -2.18
CSB-PGBD3P0DP91 RNU6-940P-201ENST00000363433 104 ntBASIC1.42□□□□□ -2.18
CSB-PGBD3P0DP91 AC011195.1-201ENST00000578177 177 ntBASIC1.42□□□□□ -2.18
CSB-PGBD3P0DP91 MIR6828-201ENST00000636181 60 ntBASIC1.42□□□□□ -2.18
CSB-PGBD3P0DP91 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.41□□□□□ -2.18
CSB-PGBD3P0DP91 RNU6-446P-201ENST00000362827 106 ntBASIC1.41□□□□□ -2.18
CSB-PGBD3P0DP91 SNORA36.1-201ENST00000363424 132 ntBASIC1.41□□□□□ -2.18
CSB-PGBD3P0DP91 OR2A41P-201ENST00000473586 105 ntBASIC1.41□□□□□ -2.18
CSB-PGBD3P0DP91 AC211469.2-201ENST00000605461 205 ntBASIC1.41□□□□□ -2.18
CSB-PGBD3P0DP91 SNORD114-4-201ENST00000363962 75 ntBASIC1.4□□□□□ -2.19
CSB-PGBD3P0DP91 MIR521-2-201ENST00000384818 87 ntBASIC1.4□□□□□ -2.19
CSB-PGBD3P0DP91 SNORD114-21-201ENST00000606412 72 ntBASIC1.4□□□□□ -2.19
CSB-PGBD3P0DP91 MIR373-201ENST00000362273 69 ntBASIC1.39□□□□□ -2.19
CSB-PGBD3P0DP91 Y_RNA.250-201ENST00000364542 110 ntBASIC1.39□□□□□ -2.19
CSB-PGBD3P0DP91 RNU6-1162P-201ENST00000384443 104 ntBASIC1.39□□□□□ -2.19
CSB-PGBD3P0DP91 MIR548AE1-201ENST00000583292 70 ntBASIC1.39□□□□□ -2.19
CSB-PGBD3P0DP91 MIR18A-201ENST00000362310 71 ntBASIC1.38□□□□□ -2.19
CSB-PGBD3P0DP91 MIR548C-201ENST00000384815 97 ntBASIC1.38□□□□□ -2.19
CSB-PGBD3P0DP91 MIR630-201ENST00000384957 97 ntBASIC1.38□□□□□ -2.19
CSB-PGBD3P0DP91 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.38□□□□□ -2.19
CSB-PGBD3P0DP91 AC021146.9-201ENST00000512503 156 ntBASIC1.38□□□□□ -2.19
CSB-PGBD3P0DP91 RNA5SP227-201ENST00000516184 113 ntBASIC1.38□□□□□ -2.19
CSB-PGBD3P0DP91 AL353765.1-201ENST00000605514 183 ntBASIC1.38□□□□□ -2.19
CSB-PGBD3P0DP91 MIR582-201ENST00000365731 98 ntBASIC1.37□□□□□ -2.19
CSB-PGBD3P0DP91 MIR652-201ENST00000385278 98 ntBASIC1.37□□□□□ -2.19
CSB-PGBD3P0DP91 RNU6-92P-201ENST00000605893 104 ntBASIC1.37□□□□□ -2.19
CSB-PGBD3P0DP91 Y_RNA.633-201ENST00000459107 95 ntBASIC1.36□□□□□ -2.19
CSB-PGBD3P0DP91 RNU6-122P-201ENST00000516818 107 ntBASIC1.36□□□□□ -2.19
CSB-PGBD3P0DP91 MIR5000-201ENST00000577717 103 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 319.2 ms