Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.14□□□□□ -2.39
HOXC4P09017 MIR6718-201ENST00000616153 80 ntBASIC0.14□□□□□ -2.39
HOXC4P09017 Y_RNA.369-201ENST00000365568 117 ntBASIC0.13□□□□□ -2.39
HOXC4P09017 Y_RNA.437-201ENST00000384113 113 ntBASIC0.13□□□□□ -2.39
HOXC4P09017 Y_RNA.611-201ENST00000410682 108 ntBASIC0.13□□□□□ -2.39
HOXC4P09017 SNORA25.13-201ENST00000516395 103 ntBASIC0.13□□□□□ -2.39
HOXC4P09017 MIR516B1-201ENST00000385211 90 ntBASIC0.12□□□□□ -2.39
HOXC4P09017 MIR652-201ENST00000385278 98 ntBASIC0.12□□□□□ -2.39
HOXC4P09017 MTATP6P29-201ENST00000415057 132 ntBASIC0.12□□□□□ -2.39
HOXC4P09017 MIR494-201ENST00000349529 81 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 RNU6-1255P-201ENST00000363434 112 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 RNU6-824P-201ENST00000363724 104 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
HOXC4P09017 RNU6-1177P-201ENST00000391058 104 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 MIR1197-201ENST00000408818 88 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 AC093729.1-201ENST00000513074 128 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 AC104408.1-201ENST00000605241 170 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 RN7SL660P-201ENST00000614852 299 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 uc_338.10-201ENST00000621872 182 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 AC006160.2-201ENST00000637708 154 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
HOXC4P09017 RNU6-495P-201ENST00000362995 107 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 Y_RNA.115-201ENST00000363272 98 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 RNA5SP325-201ENST00000363756 130 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 RNY1P1-201ENST00000364372 112 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 Y_RNA.407-201ENST00000383986 113 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 RNU6-154P-201ENST00000384306 106 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 MIR216B-201ENST00000390186 82 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 RNA5SP63-201ENST00000391225 112 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 AL450471.1-201ENST00000447509 127 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 RNU6-782P-201ENST00000516852 104 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 RNU7-188P-201ENST00000517063 64 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 SCARNA11.2-201ENST00000517183 154 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 AC140658.3-201ENST00000567603 271 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 U7.6-201ENST00000610841 64 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 IGLL4P-201ENST00000614590 133 ntBASIC0.1□□□□□ -2.39
HOXC4P09017 RNU6-161P-201ENST00000363051 106 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 RNU6-382P-201ENST00000365181 106 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 RNY4P3-201ENST00000365254 95 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 MIR593-201ENST00000384856 100 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 RNU6-1108P-201ENST00000516308 104 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 MIR5588-201ENST00000581890 63 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 AC062037.1-201ENST00000605302 128 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 AC084368.1-201ENST00000620935 65 ntBASIC0.09□□□□□ -2.4
HOXC4P09017 RNU6-624P-201ENST00000363411 107 ntBASIC0.08□□□□□ -2.4
HOXC4P09017 SNORD73B-201ENST00000364394 72 ntBASIC0.08□□□□□ -2.4
HOXC4P09017 MIR582-201ENST00000365731 98 ntBASIC0.08□□□□□ -2.4
HOXC4P09017 MIR106A-201ENST00000384870 81 ntBASIC0.08□□□□□ -2.4
HOXC4P09017 AC022137.1-201ENST00000483735 151 ntBASIC0.08□□□□□ -2.4
HOXC4P09017 RNU6-175P-201ENST00000516896 107 ntBASIC0.08□□□□□ -2.4
HOXC4P09017 AL109933.3-201ENST00000619095 188 ntBASIC0.08□□□□□ -2.4
HOXC4P09017 RNU5F-1-201ENST00000362507 117 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 Y_RNA.43-201ENST00000362670 111 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 SNORD114-5-201ENST00000362928 70 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 SNORD115-37-201ENST00000363768 82 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 RNU6-478P-201ENST00000363904 110 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 RNU6-990P-201ENST00000364385 104 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 RNU6-652P-201ENST00000365488 107 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 Y_RNA.371-201ENST00000365591 113 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 RNU6-979P-201ENST00000383896 107 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 MIR450A2-201ENST00000385022 100 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 MIR876-201ENST00000401147 81 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 AC097510.1-201ENST00000510945 133 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 MIR4773-1-201ENST00000637203 78 ntBASIC0.07□□□□□ -2.4
HOXC4P09017 RNU6-208P-201ENST00000362431 107 ntBASIC0.06□□□□□ -2.4
HOXC4P09017 MIR145-201ENST00000384967 88 ntBASIC0.06□□□□□ -2.4
HOXC4P09017 SNORD75.2-201ENST00000408784 58 ntBASIC0.06□□□□□ -2.4
HOXC4P09017 RNA5SP163-201ENST00000410304 99 ntBASIC0.06□□□□□ -2.4
HOXC4P09017 RNU6-592P-201ENST00000411333 103 ntBASIC0.06□□□□□ -2.4
HOXC4P09017 SCARNA17.3-201ENST00000516381 125 ntBASIC0.06□□□□□ -2.4
HOXC4P09017 SNORA40.17-201ENST00000517256 115 ntBASIC0.06□□□□□ -2.4
HOXC4P09017 U6.81-201ENST00000612550 106 ntBASIC0.06□□□□□ -2.4
HOXC4P09017 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.06□□□□□ -2.4
HOXC4P09017 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.06□□□□□ -2.4
HOXC4P09017 MIR203A-201ENST00000384836 110 ntBASIC0.05□□□□□ -2.4
HOXC4P09017 SNORD77.2-201ENST00000391045 68 ntBASIC0.05□□□□□ -2.4
HOXC4P09017 MIR548E-201ENST00000408287 88 ntBASIC0.05□□□□□ -2.4
HOXC4P09017 RNU7-24P-201ENST00000458867 62 ntBASIC0.05□□□□□ -2.4
HOXC4P09017 MIR4679-1-201ENST00000637619 75 ntBASIC0.05□□□□□ -2.4
HOXC4P09017 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
HOXC4P09017 Y_RNA.388-201ENST00000383919 113 ntBASIC0.04□□□□□ -2.4
HOXC4P09017 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
HOXC4P09017 RNU6-180P-201ENST00000516697 61 ntBASIC0.04□□□□□ -2.4
HOXC4P09017 MIR2909-201ENST00000617113 69 ntBASIC0.04□□□□□ -2.4
HOXC4P09017 MIR6514-201ENST00000622549 70 ntBASIC0.04□□□□□ -2.4
HOXC4P09017 Y_RNA.12-201ENST00000362393 112 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 RNU6-340P-201ENST00000364005 107 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 SNORD114-29-201ENST00000364819 70 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 RNU6-1036P-201ENST00000383959 104 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 Y_RNA.532-201ENST00000384590 113 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 SNORA49-201ENST00000386157 136 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 SNORA75.1-201ENST00000391130 148 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 Y_RNA.606-201ENST00000410579 103 ntBASIC0.03□□□□□ -2.4
HOXC4P09017 Y_RNA.607-201ENST00000410597 98 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms