Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AL365222.1-201ENST00000614661 98 ntBASIC-0.53□□□□□ -2.49
DDX58O95786 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.54□□□□□ -2.5
DDX58O95786 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.54□□□□□ -2.5
DDX58O95786 RNU6-284P-201ENST00000411105 106 ntBASIC-0.54□□□□□ -2.5
DDX58O95786 SNORD4B-201ENST00000459083 72 ntBASIC-0.54□□□□□ -2.5
DDX58O95786 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.54□□□□□ -2.5
DDX58O95786 RNU6-476P-201ENST00000384726 107 ntBASIC-0.55□□□□□ -2.5
DDX58O95786 RNU6-972P-201ENST00000391208 107 ntBASIC-0.55□□□□□ -2.5
DDX58O95786 RNU6-904P-201ENST00000516206 101 ntBASIC-0.55□□□□□ -2.5
DDX58O95786 MIR3064-201ENST00000581130 66 ntBASIC-0.55□□□□□ -2.5
DDX58O95786 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.56□□□□□ -2.5
DDX58O95786 SNORA32.3-201ENST00000384772 121 ntBASIC-0.56□□□□□ -2.5
DDX58O95786 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.56□□□□□ -2.5
DDX58O95786 RPS29P8-201ENST00000445109 171 ntBASIC-0.56□□□□□ -2.5
DDX58O95786 MIR4432-201ENST00000581823 84 ntBASIC-0.56□□□□□ -2.5
DDX58O95786 AC104996.3-201ENST00000590718 94 ntBASIC-0.56□□□□□ -2.5
DDX58O95786 MIR548AZ-201ENST00000616567 95 ntBASIC-0.56□□□□□ -2.5
DDX58O95786 uc_338.36-201ENST00000622331 158 ntBASIC-0.56□□□□□ -2.5
DDX58O95786 RNU6-81P-201ENST00000365608 104 ntBASIC-0.57□□□□□ -2.5
DDX58O95786 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.57□□□□□ -2.5
DDX58O95786 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.57□□□□□ -2.5
DDX58O95786 AC114755.3-201ENST00000481111 251 ntBASIC-0.57□□□□□ -2.5
DDX58O95786 MIR3140-201ENST00000583685 90 ntBASIC-0.58□□□□□ -2.5
DDX58O95786 SNORA63.2-201ENST00000362603 126 ntBASIC-0.59□□□□□ -2.5
DDX58O95786 SNORD58A-201ENST00000383875 65 ntBASIC-0.59□□□□□ -2.5
DDX58O95786 RNU6-887P-201ENST00000410660 100 ntBASIC-0.59□□□□□ -2.5
DDX58O95786 SNORD2-201ENST00000459163 69 ntBASIC-0.59□□□□□ -2.5
DDX58O95786 RNU6-62P-201ENST00000516526 102 ntBASIC-0.59□□□□□ -2.5
DDX58O95786 AL391099.1-201ENST00000624635 187 ntBASIC-0.59□□□□□ -2.5
DDX58O95786 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.6□□□□□ -2.51
DDX58O95786 MIR224-201ENST00000384889 81 ntBASIC-0.6□□□□□ -2.51
DDX58O95786 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
DDX58O95786 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.6□□□□□ -2.51
DDX58O95786 MIR6129-201ENST00000616087 109 ntBASIC-0.6□□□□□ -2.51
DDX58O95786 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.61□□□□□ -2.51
DDX58O95786 MIR590-201ENST00000385008 97 ntBASIC-0.61□□□□□ -2.51
DDX58O95786 SNORD42B-201ENST00000458893 67 ntBASIC-0.61□□□□□ -2.51
DDX58O95786 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.61□□□□□ -2.51
DDX58O95786 SNORD115-25-201ENST00000362619 82 ntBASIC-0.62□□□□□ -2.51
DDX58O95786 RNU4-32P-201ENST00000363404 141 ntBASIC-0.62□□□□□ -2.51
DDX58O95786 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.62□□□□□ -2.51
DDX58O95786 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.62□□□□□ -2.51
DDX58O95786 RNU6-901P-201ENST00000384593 106 ntBASIC-0.62□□□□□ -2.51
DDX58O95786 MIR4436A-201ENST00000585278 85 ntBASIC-0.62□□□□□ -2.51
DDX58O95786 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.63□□□□□ -2.51
DDX58O95786 MTATP6P29-201ENST00000415057 132 ntBASIC-0.63□□□□□ -2.51
DDX58O95786 SNORA18.5-201ENST00000516616 101 ntBASIC-0.63□□□□□ -2.51
DDX58O95786 MIR582-201ENST00000365731 98 ntBASIC-0.64□□□□□ -2.51
DDX58O95786 RNA5SP292-201ENST00000390974 118 ntBASIC-0.64□□□□□ -2.51
DDX58O95786 RNA5SP66-201ENST00000517178 101 ntBASIC-0.64□□□□□ -2.51
DDX58O95786 AL627230.5-201ENST00000619807 58 ntBASIC-0.64□□□□□ -2.51
DDX58O95786 RNU6-22P-201ENST00000384355 107 ntBASIC-0.65□□□□□ -2.51
DDX58O95786 SNORD75.1-201ENST00000408373 60 ntBASIC-0.65□□□□□ -2.51
DDX58O95786 AL445193.1-201ENST00000441183 141 ntBASIC-0.65□□□□□ -2.51
DDX58O95786 RNU7-61P-201ENST00000515897 61 ntBASIC-0.65□□□□□ -2.51
DDX58O95786 RNA5SP169-201ENST00000517268 117 ntBASIC-0.65□□□□□ -2.51
DDX58O95786 SNORD114-14-201ENST00000362723 75 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 SNORD116-10-201ENST00000363791 102 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 RNU6-900P-201ENST00000384498 102 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 MIR9-2-201ENST00000384838 87 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 MIR548E-201ENST00000408287 88 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 RNU6-554P-201ENST00000410466 106 ntBASIC-0.66□□□□□ -2.52
DDX58O95786 SNORA19-201ENST00000384737 128 ntBASIC-0.67□□□□□ -2.52
DDX58O95786 SNORA49-201ENST00000386157 136 ntBASIC-0.67□□□□□ -2.52
DDX58O95786 AC026421.1-201ENST00000519101 163 ntBASIC-0.67□□□□□ -2.52
DDX58O95786 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.68□□□□□ -2.52
DDX58O95786 RNU6-106P-201ENST00000384405 107 ntBASIC-0.68□□□□□ -2.52
DDX58O95786 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.68□□□□□ -2.52
DDX58O95786 RNU6-109P-201ENST00000516364 107 ntBASIC-0.68□□□□□ -2.52
DDX58O95786 RNU6-184P-201ENST00000516514 107 ntBASIC-0.68□□□□□ -2.52
DDX58O95786 RNU6-495P-201ENST00000362995 107 ntBASIC-0.69□□□□□ -2.52
DDX58O95786 RNU6-162P-201ENST00000516228 103 ntBASIC-0.69□□□□□ -2.52
DDX58O95786 RNU6-313P-201ENST00000516317 112 ntBASIC-0.69□□□□□ -2.52
DDX58O95786 SNORA3B-201ENST00000391305 131 ntBASIC-0.7□□□□□ -2.52
DDX58O95786 AC097510.1-201ENST00000510945 133 ntBASIC-0.7□□□□□ -2.52
DDX58O95786 AC093726.3-201ENST00000637588 150 ntBASIC-0.7□□□□□ -2.52
DDX58O95786 AC132825.6-201ENST00000638861 357 ntBASIC-0.7□□□□□ -2.52
DDX58O95786 RNU6-834P-201ENST00000362367 110 ntBASIC-0.71□□□□□ -2.52
DDX58O95786 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.71□□□□□ -2.52
DDX58O95786 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.71□□□□□ -2.52
DDX58O95786 snoU13.13-201ENST00000458842 104 ntBASIC-0.71□□□□□ -2.52
DDX58O95786 SNORA40.17-201ENST00000517256 115 ntBASIC-0.71□□□□□ -2.52
DDX58O95786 MIR548AX-201ENST00000580117 73 ntBASIC-0.71□□□□□ -2.52
DDX58O95786 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.71□□□□□ -2.52
DDX58O95786 SNORD56B-201ENST00000384713 71 ntBASIC-0.72□□□□□ -2.52
DDX58O95786 SNORD90-201ENST00000391145 111 ntBASIC-0.72□□□□□ -2.52
DDX58O95786 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.72□□□□□ -2.52
DDX58O95786 RNU6-537P-201ENST00000517277 103 ntBASIC-0.72□□□□□ -2.52
DDX58O95786 AC145423.2-201ENST00000610631 239 ntBASIC-0.72□□□□□ -2.52
DDX58O95786 MIR409-201ENST00000362237 79 ntBASIC-0.73□□□□□ -2.53
DDX58O95786 RNU5F-1-201ENST00000362507 117 ntBASIC-0.73□□□□□ -2.53
DDX58O95786 MIR4280-201ENST00000582178 76 ntBASIC-0.73□□□□□ -2.53
DDX58O95786 SNORA24B-201ENST00000384176 131 ntBASIC-0.74□□□□□ -2.53
DDX58O95786 MIR204-201ENST00000385200 110 ntBASIC-0.74□□□□□ -2.53
DDX58O95786 RNU7-55P-201ENST00000459426 62 ntBASIC-0.74□□□□□ -2.53
DDX58O95786 RNU6-479P-201ENST00000516348 105 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 228.9 ms