Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC140658.3-201ENST00000567603 271 ntBASIC-1.33□□□□□ -2.62
NPHP4O75161 AC090617.8-201ENST00000623339 167 ntBASIC-1.33□□□□□ -2.62
NPHP4O75161 RNU6-208P-201ENST00000362431 107 ntBASIC-1.34□□□□□ -2.62
NPHP4O75161 AL118496.2-201ENST00000448300 230 ntBASIC-1.34□□□□□ -2.62
NPHP4O75161 AC021146.9-201ENST00000512503 156 ntBASIC-1.34□□□□□ -2.62
NPHP4O75161 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.34□□□□□ -2.62
NPHP4O75161 AC025166.1-201ENST00000612411 163 ntBASIC-1.34□□□□□ -2.62
NPHP4O75161 U6.96-201ENST00000636425 70 ntBASIC-1.34□□□□□ -2.62
NPHP4O75161 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.35□□□□□ -2.63
NPHP4O75161 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.35□□□□□ -2.63
NPHP4O75161 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.35□□□□□ -2.63
NPHP4O75161 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.35□□□□□ -2.63
NPHP4O75161 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.35□□□□□ -2.63
NPHP4O75161 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.35□□□□□ -2.63
NPHP4O75161 AP001340.1-201ENST00000624405 217 ntBASIC-1.35□□□□□ -2.63
NPHP4O75161 RNU6-682P-201ENST00000363843 106 ntBASIC-1.36□□□□□ -2.63
NPHP4O75161 MIR3613-201ENST00000579844 87 ntBASIC-1.36□□□□□ -2.63
NPHP4O75161 MIR147A-201ENST00000385079 72 ntBASIC-1.37□□□□□ -2.63
NPHP4O75161 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.37□□□□□ -2.63
NPHP4O75161 AP001094.1-201ENST00000579805 193 ntBASIC-1.37□□□□□ -2.63
NPHP4O75161 MIR3064-201ENST00000581130 66 ntBASIC-1.37□□□□□ -2.63
NPHP4O75161 YWHAEP3-201ENST00000582767 121 ntBASIC-1.37□□□□□ -2.63
NPHP4O75161 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.37□□□□□ -2.63
NPHP4O75161 MIR382-201ENST00000637119 76 ntBASIC-1.37□□□□□ -2.63
NPHP4O75161 RNU6-832P-201ENST00000363319 107 ntBASIC-1.38□□□□□ -2.63
NPHP4O75161 SNORA63-201ENST00000363450 132 ntBASIC-1.38□□□□□ -2.63
NPHP4O75161 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.38□□□□□ -2.63
NPHP4O75161 AC068339.1-201ENST00000526965 141 ntBASIC-1.38□□□□□ -2.63
NPHP4O75161 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.39□□□□□ -2.63
NPHP4O75161 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.39□□□□□ -2.63
NPHP4O75161 SNORA62.4-201ENST00000365504 151 ntBASIC-1.39□□□□□ -2.63
NPHP4O75161 SNORD116-18-201ENST00000383961 92 ntBASIC-1.39□□□□□ -2.63
NPHP4O75161 SNORA24B-201ENST00000384176 131 ntBASIC-1.39□□□□□ -2.63
NPHP4O75161 SNORD58C-201ENST00000365223 64 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 MIR548U-201ENST00000390728 81 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 SNORD90-201ENST00000391145 111 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 RNA5SP272-201ENST00000516095 111 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 MIR4694-201ENST00000578534 80 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.4□□□□□ -2.63
NPHP4O75161 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 MIR548X2-201ENST00000579776 100 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 MIR4464-201ENST00000580818 92 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 AC104996.3-201ENST00000590718 94 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 AL353803.5-201ENST00000599815 141 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 U7.2-201ENST00000607576 63 ntBASIC-1.4□□□□□ -2.63
NPHP4O75161 RNU6-574P-201ENST00000384265 107 ntBASIC-1.41□□□□□ -2.64
NPHP4O75161 SNORD75.2-201ENST00000408784 58 ntBASIC-1.41□□□□□ -2.64
NPHP4O75161 SCARNA18B-201ENST00000458806 135 ntBASIC-1.41□□□□□ -2.64
NPHP4O75161 RNA5SP147-201ENST00000516493 109 ntBASIC-1.41□□□□□ -2.64
NPHP4O75161 MIR4503-201ENST00000582187 83 ntBASIC-1.41□□□□□ -2.64
NPHP4O75161 AL035470.1-201ENST00000622571 220 ntBASIC-1.41□□□□□ -2.64
NPHP4O75161 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.42□□□□□ -2.64
NPHP4O75161 RNA5SP292-201ENST00000390974 118 ntBASIC-1.42□□□□□ -2.64
NPHP4O75161 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.42□□□□□ -2.64
NPHP4O75161 SNORD4B-201ENST00000459083 72 ntBASIC-1.42□□□□□ -2.64
NPHP4O75161 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.42□□□□□ -2.64
NPHP4O75161 RNU7-120P-201ENST00000459334 63 ntBASIC-1.42□□□□□ -2.64
NPHP4O75161 MIR4306-201ENST00000583390 91 ntBASIC-1.42□□□□□ -2.64
NPHP4O75161 AC103810.7-201ENST00000607821 91 ntBASIC-1.42□□□□□ -2.64
NPHP4O75161 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.43□□□□□ -2.64
NPHP4O75161 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.43□□□□□ -2.64
NPHP4O75161 snoU83B.1-201ENST00000517136 88 ntBASIC-1.43□□□□□ -2.64
NPHP4O75161 MIR6888-201ENST00000621977 67 ntBASIC-1.43□□□□□ -2.64
NPHP4O75161 RNY3P2-201ENST00000362918 102 ntBASIC-1.44□□□□□ -2.64
NPHP4O75161 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.44□□□□□ -2.64
NPHP4O75161 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.44□□□□□ -2.64
NPHP4O75161 MIR203A-201ENST00000384836 110 ntBASIC-1.44□□□□□ -2.64
NPHP4O75161 MIR548A1-201ENST00000385041 97 ntBASIC-1.44□□□□□ -2.64
NPHP4O75161 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.44□□□□□ -2.64
NPHP4O75161 MTND3P2-201ENST00000438452 342 ntBASIC-1.44□□□□□ -2.64
NPHP4O75161 RNU7-24P-201ENST00000458867 62 ntBASIC-1.44□□□□□ -2.64
NPHP4O75161 MIR548Z-201ENST00000584743 97 ntBASIC-1.44□□□□□ -2.64
NPHP4O75161 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.45□□□□□ -2.64
NPHP4O75161 RNU6-382P-201ENST00000365181 106 ntBASIC-1.45□□□□□ -2.64
NPHP4O75161 RNU6-327P-201ENST00000516270 127 ntBASIC-1.45□□□□□ -2.64
NPHP4O75161 AL445584.3-201ENST00000617173 78 ntBASIC-1.45□□□□□ -2.64
NPHP4O75161 RNU6-804P-201ENST00000384286 107 ntBASIC-1.46□□□□□ -2.64
NPHP4O75161 RNU6-644P-201ENST00000391155 98 ntBASIC-1.46□□□□□ -2.64
NPHP4O75161 snoU13.17-201ENST00000458802 104 ntBASIC-1.46□□□□□ -2.64
NPHP4O75161 RNU6-813P-201ENST00000384691 107 ntBASIC-1.47□□□□□ -2.64
NPHP4O75161 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.47□□□□□ -2.64
NPHP4O75161 SNORA18.5-201ENST00000516616 101 ntBASIC-1.47□□□□□ -2.64
NPHP4O75161 SNORA33.1-201ENST00000364957 130 ntBASIC-1.48□□□□□ -2.65
NPHP4O75161 RNU6-260P-201ENST00000384092 107 ntBASIC-1.48□□□□□ -2.65
NPHP4O75161 MIR569-201ENST00000385228 96 ntBASIC-1.48□□□□□ -2.65
NPHP4O75161 MIR1255B2-201ENST00000408618 67 ntBASIC-1.48□□□□□ -2.65
NPHP4O75161 RNU6-519P-201ENST00000410590 108 ntBASIC-1.48□□□□□ -2.65
NPHP4O75161 RNU6-394P-201ENST00000410735 107 ntBASIC-1.48□□□□□ -2.65
NPHP4O75161 MIR4773-1-201ENST00000637203 78 ntBASIC-1.48□□□□□ -2.65
NPHP4O75161 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.49□□□□□ -2.65
NPHP4O75161 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.49□□□□□ -2.65
NPHP4O75161 SNORD45B-201ENST00000364617 72 ntBASIC-1.49□□□□□ -2.65
NPHP4O75161 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.49□□□□□ -2.65
NPHP4O75161 RNY4P7-201ENST00000364600 96 ntBASIC-1.49□□□□□ -2.65
NPHP4O75161 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.49□□□□□ -2.65
NPHP4O75161 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.49□□□□□ -2.65
NPHP4O75161 RNU6-706P-201ENST00000517229 104 ntBASIC-1.49□□□□□ -2.65
NPHP4O75161 MIR4439-201ENST00000583746 80 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms