Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
PRKNO60260 SNORA2A-201ENST00000383885 135 ntBASIC0.29□□□□□ -2.36
PRKNO60260 RNU6V-201ENST00000384105 107 ntBASIC0.29□□□□□ -2.36
PRKNO60260 MIR760-201ENST00000390220 80 ntBASIC0.29□□□□□ -2.36
PRKNO60260 SNORA26.2-201ENST00000390922 122 ntBASIC0.29□□□□□ -2.36
PRKNO60260 MIR1302-4-201ENST00000408701 150 ntBASIC0.29□□□□□ -2.36
PRKNO60260 Y_RNA.607-201ENST00000410597 98 ntBASIC0.29□□□□□ -2.36
PRKNO60260 AC073261.1-201ENST00000429409 121 ntBASIC0.29□□□□□ -2.36
PRKNO60260 RNU7-171P-201ENST00000459581 62 ntBASIC0.29□□□□□ -2.36
PRKNO60260 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
PRKNO60260 RNU7-129P-201ENST00000516128 62 ntBASIC0.29□□□□□ -2.36
PRKNO60260 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
PRKNO60260 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
PRKNO60260 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
PRKNO60260 MIR2909-201ENST00000617113 69 ntBASIC0.29□□□□□ -2.36
PRKNO60260 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
PRKNO60260 RNU6-624P-201ENST00000363411 107 ntBASIC0.28□□□□□ -2.36
PRKNO60260 RNU6-54P-201ENST00000365563 107 ntBASIC0.28□□□□□ -2.36
PRKNO60260 Y_RNA.388-201ENST00000383919 113 ntBASIC0.28□□□□□ -2.36
PRKNO60260 RNU6-1152P-201ENST00000384576 107 ntBASIC0.28□□□□□ -2.36
PRKNO60260 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
PRKNO60260 HMGN2P22-201ENST00000427588 175 ntBASIC0.28□□□□□ -2.36
PRKNO60260 snoU13.17-201ENST00000458802 104 ntBASIC0.28□□□□□ -2.36
PRKNO60260 RNU6-1232P-201ENST00000516299 86 ntBASIC0.28□□□□□ -2.36
PRKNO60260 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
PRKNO60260 YWHAEP2-201ENST00000580066 112 ntBASIC0.28□□□□□ -2.36
PRKNO60260 RNU6-1276P-201ENST00000365372 104 ntBASIC0.27□□□□□ -2.37
PRKNO60260 RNU6-815P-201ENST00000384080 113 ntBASIC0.27□□□□□ -2.37
PRKNO60260 RNU6-242P-201ENST00000384359 107 ntBASIC0.27□□□□□ -2.37
PRKNO60260 MIR501-201ENST00000390204 84 ntBASIC0.27□□□□□ -2.37
PRKNO60260 RNU6-592P-201ENST00000411333 103 ntBASIC0.27□□□□□ -2.37
PRKNO60260 RNU5B-6P-201ENST00000516765 68 ntBASIC0.27□□□□□ -2.37
PRKNO60260 MIR4473-201ENST00000583731 91 ntBASIC0.27□□□□□ -2.37
PRKNO60260 RNU6-208P-201ENST00000362431 107 ntBASIC0.26□□□□□ -2.37
PRKNO60260 Y_RNA.437-201ENST00000384113 113 ntBASIC0.26□□□□□ -2.37
PRKNO60260 SNORD77.2-201ENST00000391045 68 ntBASIC0.26□□□□□ -2.37
PRKNO60260 RNU6-1177P-201ENST00000391058 104 ntBASIC0.26□□□□□ -2.37
PRKNO60260 AL450471.1-201ENST00000447509 127 ntBASIC0.26□□□□□ -2.37
PRKNO60260 RNU6-1108P-201ENST00000516308 104 ntBASIC0.26□□□□□ -2.37
PRKNO60260 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.26□□□□□ -2.37
PRKNO60260 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
PRKNO60260 U7.6-201ENST00000610841 64 ntBASIC0.26□□□□□ -2.37
PRKNO60260 RNU6-161P-201ENST00000363051 106 ntBASIC0.25□□□□□ -2.37
PRKNO60260 Y_RNA.125-201ENST00000363371 111 ntBASIC0.25□□□□□ -2.37
PRKNO60260 RNA5SP128-201ENST00000365305 116 ntBASIC0.25□□□□□ -2.37
PRKNO60260 AC097510.1-201ENST00000510945 133 ntBASIC0.25□□□□□ -2.37
PRKNO60260 RNU6-557P-201ENST00000516842 110 ntBASIC0.25□□□□□ -2.37
PRKNO60260 MIR548AE1-201ENST00000583292 70 ntBASIC0.25□□□□□ -2.37
PRKNO60260 SNORA9.1-201ENST00000362412 131 ntBASIC0.24□□□□□ -2.37
PRKNO60260 RNU6-824P-201ENST00000363724 104 ntBASIC0.24□□□□□ -2.37
PRKNO60260 RNU6-478P-201ENST00000363904 110 ntBASIC0.24□□□□□ -2.37
PRKNO60260 RNA5SP173-201ENST00000364857 136 ntBASIC0.24□□□□□ -2.37
PRKNO60260 Y_RNA.316-201ENST00000365118 111 ntBASIC0.24□□□□□ -2.37
PRKNO60260 Y_RNA.407-201ENST00000383986 113 ntBASIC0.24□□□□□ -2.37
PRKNO60260 RNU6-129P-201ENST00000391022 107 ntBASIC0.24□□□□□ -2.37
PRKNO60260 RNA5SP63-201ENST00000391225 112 ntBASIC0.24□□□□□ -2.37
PRKNO60260 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.24□□□□□ -2.37
PRKNO60260 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
PRKNO60260 Y_RNA.660-201ENST00000516002 120 ntBASIC0.24□□□□□ -2.37
PRKNO60260 MIR548AD-201ENST00000584780 82 ntBASIC0.24□□□□□ -2.37
PRKNO60260 U6.81-201ENST00000612550 106 ntBASIC0.24□□□□□ -2.37
PRKNO60260 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
PRKNO60260 RNU6-495P-201ENST00000362995 107 ntBASIC0.23□□□□□ -2.37
PRKNO60260 SNORD75.2-201ENST00000408784 58 ntBASIC0.23□□□□□ -2.37
PRKNO60260 SNORD42B-201ENST00000458893 67 ntBASIC0.23□□□□□ -2.37
PRKNO60260 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
PRKNO60260 MIR4666B-201ENST00000578142 81 ntBASIC0.23□□□□□ -2.37
PRKNO60260 MIR4677-201ENST00000584153 80 ntBASIC0.23□□□□□ -2.37
PRKNO60260 MIR499B-201ENST00000636498 73 ntBASIC0.23□□□□□ -2.37
PRKNO60260 Y_RNA.264-201ENST00000364665 102 ntBASIC0.22□□□□□ -2.37
PRKNO60260 RNU6-382P-201ENST00000365181 106 ntBASIC0.22□□□□□ -2.37
PRKNO60260 RNU6-787P-201ENST00000384032 107 ntBASIC0.22□□□□□ -2.37
PRKNO60260 Y_RNA.433-201ENST00000384089 102 ntBASIC0.22□□□□□ -2.37
PRKNO60260 RNU7-24P-201ENST00000458867 62 ntBASIC0.22□□□□□ -2.37
PRKNO60260 RNU6-686P-201ENST00000364839 107 ntBASIC0.21□□□□□ -2.38
PRKNO60260 RNU6-127P-201ENST00000390897 107 ntBASIC0.21□□□□□ -2.38
PRKNO60260 Y_RNA.606-201ENST00000410579 103 ntBASIC0.21□□□□□ -2.38
PRKNO60260 MIR4773-1-201ENST00000637203 78 ntBASIC0.21□□□□□ -2.38
PRKNO60260 MIRLET7A1-201ENST00000362295 80 ntBASIC0.2□□□□□ -2.38
PRKNO60260 Y_RNA.12-201ENST00000362393 112 ntBASIC0.2□□□□□ -2.38
PRKNO60260 RNU6-315P-201ENST00000362666 107 ntBASIC0.2□□□□□ -2.38
PRKNO60260 RNU6-340P-201ENST00000364005 107 ntBASIC0.2□□□□□ -2.38
PRKNO60260 RNU6-652P-201ENST00000365488 107 ntBASIC0.2□□□□□ -2.38
PRKNO60260 Y_RNA.371-201ENST00000365591 113 ntBASIC0.2□□□□□ -2.38
PRKNO60260 RNU6-573P-201ENST00000383938 106 ntBASIC0.2□□□□□ -2.38
PRKNO60260 RNU6-154P-201ENST00000384306 106 ntBASIC0.2□□□□□ -2.38
PRKNO60260 MIR4712-201ENST00000583750 82 ntBASIC0.2□□□□□ -2.38
PRKNO60260 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.2□□□□□ -2.38
PRKNO60260 uc_338.10-201ENST00000621872 182 ntBASIC0.2□□□□□ -2.38
PRKNO60260 MIR1245B-201ENST00000636115 69 ntBASIC0.2□□□□□ -2.38
PRKNO60260 Y_RNA.532-201ENST00000384590 113 ntBASIC0.19□□□□□ -2.38
PRKNO60260 MIR516B1-201ENST00000385211 90 ntBASIC0.19□□□□□ -2.38
PRKNO60260 MIR652-201ENST00000385278 98 ntBASIC0.19□□□□□ -2.38
PRKNO60260 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
PRKNO60260 YWHAEP3-201ENST00000582767 121 ntBASIC0.19□□□□□ -2.38
PRKNO60260 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
PRKNO60260 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
PRKNO60260 MIR3202-2-201ENST00000635980 79 ntBASIC0.19□□□□□ -2.38
PRKNO60260 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
PRKNO60260 SNORD114-4-201ENST00000363962 75 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms