Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 MTND3P2-201ENST00000438452 342 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 SNORD4B-201ENST00000459083 72 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 SNORA18.5-201ENST00000516616 101 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 AC006362.1-201ENST00000567392 174 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 DEFB108C-201ENST00000400154 252 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 RNU7-123P-201ENST00000515911 60 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 MIR5693-201ENST00000577722 73 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 U2.7-201ENST00000619197 100 ntBASIC-1.04□□□□□ -2.58
CACNA1AO00555 RNU6-824P-201ENST00000363724 104 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 RNU6-340P-201ENST00000364005 107 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 SNORA40.15-201ENST00000516884 107 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 MIR548Z-201ENST00000584743 97 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 AL132765.2-201ENST00000610812 351 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 MIR379-201ENST00000362218 67 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 RNY4P14-201ENST00000363656 96 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 SNORA63.7-201ENST00000365579 123 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 RNU6-643P-201ENST00000384018 107 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 MIR1302-6-201ENST00000408466 90 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 RNU6-584P-201ENST00000410350 95 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-1.05□□□□□ -2.58
CACNA1AO00555 AC097484.2-201ENST00000509147 251 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 SNORD116.3-201ENST00000517176 78 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 AC107308.1-201ENST00000615897 301 ntBASIC-1.05□□□□□ -2.58
CACNA1AO00555 RNU6-508P-201ENST00000363231 103 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 MTND1P29-201ENST00000448112 647 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 RNU6-656P-201ENST00000516785 107 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 MIR548W-201ENST00000581970 74 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 RNU6-645P-201ENST00000364649 106 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 RNY4P13-201ENST00000384284 96 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 RNU6-381P-201ENST00000391259 108 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 SNORA40.14-201ENST00000516543 86 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 AC104996.3-201ENST00000590718 94 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.06□□□□□ -2.58
CACNA1AO00555 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 SNORA24B-201ENST00000384176 131 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 AC104985.2-201ENST00000620598 500 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 RNU6-121P-201ENST00000410525 99 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 MTND1P19-201ENST00000511780 315 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 RNU7-121P-201ENST00000516604 62 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 AC025166.1-201ENST00000612411 163 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 AC092794.1-201ENST00000612734 582 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.07□□□□□ -2.58
CACNA1AO00555 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-211P-201ENST00000384047 107 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-106P-201ENST00000384405 107 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-995P-201ENST00000391244 107 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-415P-201ENST00000516252 97 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 MIR3149-201ENST00000584629 83 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-770P-201ENST00000363929 105 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-290P-201ENST00000365212 101 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-493P-201ENST00000391321 108 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 MIR3613-201ENST00000579844 87 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 AC012531.4-201ENST00000616509 177 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 U4.4-201ENST00000620626 117 ntBASIC-1.08□□□□□ -2.58
CACNA1AO00555 RNU6-238P-201ENST00000363313 106 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 RNU6-141P-201ENST00000410499 105 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.09□□□□□ -2.58
CACNA1AO00555 RNU6-956P-201ENST00000458868 103 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 RNU6-752P-201ENST00000516376 102 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 RNU6-781P-201ENST00000516377 101 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 RNU6-861P-201ENST00000516745 106 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 U6.81-201ENST00000612550 106 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 RNU6-768P-201ENST00000384683 107 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 MIR548AA1-201ENST00000384971 97 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 MIR548P-201ENST00000408336 84 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 RNA5SP136-201ENST00000410906 107 ntBASIC-1.09□□□□□ -2.58
CACNA1AO00555 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.1□□□□□ -2.58
CACNA1AO00555 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.1□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 267.1 ms