Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MIR3202-2-201ENST00000635980 79 ntBASIC0.51□□□□□ -2.33
FOXN3O00409 SNORD110-201ENST00000408189 75 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.5□□□□□ -2.33
FOXN3O00409 RNU6-863P-201ENST00000515989 104 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 RNU7-129P-201ENST00000516128 62 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 RNU6-1232P-201ENST00000516299 86 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 YWHAEP2-201ENST00000580066 112 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 MIR4712-201ENST00000583750 82 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 RNU1-29P-201ENST00000606574 126 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 MIR4773-1-201ENST00000637203 78 ntBASIC0.5□□□□□ -2.33
FOXN3O00409 MT-TY-201ENST00000387409 66 ntBASIC0.49□□□□□ -2.33
FOXN3O00409 RNU6-1177P-201ENST00000391058 104 ntBASIC0.49□□□□□ -2.33
FOXN3O00409 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.49□□□□□ -2.33
FOXN3O00409 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
FOXN3O00409 MIR548O2-201ENST00000616090 70 ntBASIC0.49□□□□□ -2.33
FOXN3O00409 Y_RNA.12-201ENST00000362393 112 ntBASIC0.48□□□□□ -2.33
FOXN3O00409 U3.27-201ENST00000391237 200 ntBASIC0.48□□□□□ -2.33
FOXN3O00409 RNU2-59P-201ENST00000410482 191 ntBASIC0.48□□□□□ -2.33
FOXN3O00409 MIR6755-201ENST00000619993 66 ntBASIC0.48□□□□□ -2.33
FOXN3O00409 AC010487.4-201ENST00000637027 61 ntBASIC0.48□□□□□ -2.33
FOXN3O00409 MIR103A1-201ENST00000362165 78 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 Y_RNA.94-201ENST00000363068 106 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 SNORD44.1-201ENST00000363202 61 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 RNU6-382P-201ENST00000365181 106 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 SNORD42B-201ENST00000458893 67 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 RNU6-848P-201ENST00000515948 107 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 RNU6-617P-201ENST00000516147 107 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 RNU6-473P-201ENST00000516164 107 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 RNU6-1049P-201ENST00000516414 107 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 AC073869.9-201ENST00000641610 120 ntBASIC0.47□□□□□ -2.33
FOXN3O00409 RNU6-686P-201ENST00000364839 107 ntBASIC0.46□□□□□ -2.34
FOXN3O00409 Y_RNA.532-201ENST00000384590 113 ntBASIC0.46□□□□□ -2.34
FOXN3O00409 MIR548AE1-201ENST00000583292 70 ntBASIC0.46□□□□□ -2.34
FOXN3O00409 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.46□□□□□ -2.34
FOXN3O00409 AC090625.1-201ENST00000357130 210 ntBASIC0.45□□□□□ -2.34
FOXN3O00409 MIR760-201ENST00000390220 80 ntBASIC0.45□□□□□ -2.34
FOXN3O00409 AC069503.3-201ENST00000618674 145 ntBASIC0.45□□□□□ -2.34
FOXN3O00409 MIRLET7A1-201ENST00000362295 80 ntBASIC0.44□□□□□ -2.34
FOXN3O00409 Y_RNA.30-201ENST00000362572 97 ntBASIC0.44□□□□□ -2.34
FOXN3O00409 MIR216B-201ENST00000390186 82 ntBASIC0.44□□□□□ -2.34
FOXN3O00409 HMGN2P22-201ENST00000427588 175 ntBASIC0.44□□□□□ -2.34
FOXN3O00409 AC097510.1-201ENST00000510945 133 ntBASIC0.44□□□□□ -2.34
FOXN3O00409 RNU6-857P-201ENST00000515893 110 ntBASIC0.44□□□□□ -2.34
FOXN3O00409 RNU6-557P-201ENST00000516842 110 ntBASIC0.44□□□□□ -2.34
FOXN3O00409 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
FOXN3O00409 SNORA2A-201ENST00000383885 135 ntBASIC0.43□□□□□ -2.34
FOXN3O00409 MIR203A-201ENST00000384836 110 ntBASIC0.43□□□□□ -2.34
FOXN3O00409 MIR889-201ENST00000401280 79 ntBASIC0.43□□□□□ -2.34
FOXN3O00409 RNA5SP330-201ENST00000517096 96 ntBASIC0.43□□□□□ -2.34
FOXN3O00409 U6.81-201ENST00000612550 106 ntBASIC0.43□□□□□ -2.34
FOXN3O00409 RNU6-315P-201ENST00000362666 107 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 RNU6-330P-201ENST00000363015 107 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 Y_RNA.115-201ENST00000363272 98 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 RNU6-340P-201ENST00000364005 107 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 Y_RNA.374-201ENST00000365606 101 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 RNU6-1275P-201ENST00000391087 107 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 SCARNA18B-201ENST00000458806 135 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 RNU6-274P-201ENST00000459566 107 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 Y_RNA.660-201ENST00000516002 120 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 Y_RNA.788-201ENST00000622394 112 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 MIR499B-201ENST00000636498 73 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 MIR924-201ENST00000638017 53 ntBASIC0.42□□□□□ -2.34
FOXN3O00409 RNU6-495P-201ENST00000362995 107 ntBASIC0.41□□□□□ -2.34
FOXN3O00409 Y_RNA.264-201ENST00000364665 102 ntBASIC0.41□□□□□ -2.34
FOXN3O00409 SNORD75.2-201ENST00000408784 58 ntBASIC0.41□□□□□ -2.34
FOXN3O00409 YWHAEP3-201ENST00000582767 121 ntBASIC0.41□□□□□ -2.34
FOXN3O00409 RNA5SP62-201ENST00000363457 110 ntBASIC0.4□□□□□ -2.35
FOXN3O00409 RNA5SP457-201ENST00000363657 124 ntBASIC0.4□□□□□ -2.35
FOXN3O00409 RNU6-990P-201ENST00000364385 104 ntBASIC0.4□□□□□ -2.35
FOXN3O00409 RNU6-154P-201ENST00000384306 106 ntBASIC0.4□□□□□ -2.35
FOXN3O00409 MIR501-201ENST00000390204 84 ntBASIC0.4□□□□□ -2.35
FOXN3O00409 AC073261.1-201ENST00000429409 121 ntBASIC0.4□□□□□ -2.35
FOXN3O00409 MIR664A-201ENST00000626086 82 ntBASIC0.4□□□□□ -2.35
FOXN3O00409 RNU6-1094P-201ENST00000362416 104 ntBASIC0.39□□□□□ -2.35
FOXN3O00409 RNU6-1327P-201ENST00000365302 105 ntBASIC0.39□□□□□ -2.35
FOXN3O00409 Y_RNA.407-201ENST00000383986 113 ntBASIC0.39□□□□□ -2.35
FOXN3O00409 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
FOXN3O00409 RNU6-279P-201ENST00000391297 101 ntBASIC0.39□□□□□ -2.35
FOXN3O00409 AL691482.2-201ENST00000457453 84 ntBASIC0.39□□□□□ -2.35
FOXN3O00409 RNU6-303P-201ENST00000517091 106 ntBASIC0.39□□□□□ -2.35
FOXN3O00409 AC243829.6-201ENST00000612652 106 ntBASIC0.39□□□□□ -2.35
FOXN3O00409 MIR8087-201ENST00000612745 78 ntBASIC0.39□□□□□ -2.35
FOXN3O00409 MIR330-201ENST00000362196 94 ntBASIC0.38□□□□□ -2.35
FOXN3O00409 RNU6-815P-201ENST00000384080 113 ntBASIC0.38□□□□□ -2.35
FOXN3O00409 SNORA8.1-201ENST00000384250 140 ntBASIC0.38□□□□□ -2.35
FOXN3O00409 MIR652-201ENST00000385278 98 ntBASIC0.38□□□□□ -2.35
FOXN3O00409 RNA5SP147-201ENST00000516493 109 ntBASIC0.38□□□□□ -2.35
FOXN3O00409 MIR5706-201ENST00000579841 80 ntBASIC0.38□□□□□ -2.35
FOXN3O00409 Y_RNA.244-201ENST00000364484 109 ntBASIC0.37□□□□□ -2.35
FOXN3O00409 RNA5SP128-201ENST00000365305 116 ntBASIC0.37□□□□□ -2.35
FOXN3O00409 MIR516B1-201ENST00000385211 90 ntBASIC0.37□□□□□ -2.35
FOXN3O00409 MIR1197-201ENST00000408818 88 ntBASIC0.37□□□□□ -2.35
FOXN3O00409 RNU6-380P-201ENST00000410207 107 ntBASIC0.37□□□□□ -2.35
FOXN3O00409 MIR6509-201ENST00000614603 85 ntBASIC0.37□□□□□ -2.35
FOXN3O00409 AL109933.3-201ENST00000619095 188 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 269.4 ms