Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 snoU13.31-201ENST00000607291 104 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR6509-201ENST00000614603 85 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 AC069503.3-201ENST00000618674 145 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR6767-201ENST00000637302 66 ntBASIC0.48□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR154-201ENST00000385243 84 ntBASIC0.47□□□□□ -2.33
IGKV3D-20A0A0C4DH25 AL691482.2-201ENST00000457453 84 ntBASIC0.47□□□□□ -2.33
IGKV3D-20A0A0C4DH25 snoU13.13-201ENST00000458842 104 ntBASIC0.47□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6-274P-201ENST00000459566 107 ntBASIC0.47□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNA5SP147-201ENST00000516493 109 ntBASIC0.47□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6-539P-201ENST00000516665 103 ntBASIC0.47□□□□□ -2.33
IGKV3D-20A0A0C4DH25 MIR6835-201ENST00000621552 64 ntBASIC0.47□□□□□ -2.33
IGKV3D-20A0A0C4DH25 RNU6-681P-201ENST00000364012 104 ntBASIC0.46□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-260P-201ENST00000384092 107 ntBASIC0.46□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR548E-201ENST00000408287 88 ntBASIC0.46□□□□□ -2.34
IGKV3D-20A0A0C4DH25 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.46□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-656P-201ENST00000516785 107 ntBASIC0.46□□□□□ -2.34
IGKV3D-20A0A0C4DH25 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
IGKV3D-20A0A0C4DH25 SNORD110-201ENST00000408189 75 ntBASIC0.45□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-380P-201ENST00000410207 107 ntBASIC0.45□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-752P-201ENST00000516376 102 ntBASIC0.45□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR4524B-201ENST00000581569 115 ntBASIC0.45□□□□□ -2.34
IGKV3D-20A0A0C4DH25 AL590095.2-201ENST00000604136 117 ntBASIC0.45□□□□□ -2.34
IGKV3D-20A0A0C4DH25 AC005520.4-201ENST00000604337 90 ntBASIC0.45□□□□□ -2.34
IGKV3D-20A0A0C4DH25 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU4-45P-201ENST00000365469 141 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-110P-201ENST00000384508 104 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR518A1-201ENST00000385068 85 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR92A1-201ENST00000385233 78 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 SNORA49-201ENST00000386157 136 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR501-201ENST00000390204 84 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-663P-201ENST00000391105 106 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 AC006210.1-201ENST00000424882 111 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU7-74P-201ENST00000459104 62 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 Y_RNA.633-201ENST00000459107 95 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-863P-201ENST00000515989 104 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 uc_338.17-201ENST00000619633 179 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 AC092634.7-201ENST00000621022 103 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 AC090617.8-201ENST00000623339 167 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 U6.111-201ENST00000636093 83 ntBASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.44□□□□□ -2.34
IGKV3D-20A0A0C4DH25 SNORA2A-201ENST00000383885 135 ntBASIC0.43□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR508-201ENST00000384857 115 ntBASIC0.43□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR216B-201ENST00000390186 82 ntBASIC0.43□□□□□ -2.34
IGKV3D-20A0A0C4DH25 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
IGKV3D-20A0A0C4DH25 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
IGKV3D-20A0A0C4DH25 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
IGKV3D-20A0A0C4DH25 AC073869.9-201ENST00000641610 120 ntBASIC0.43□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-645P-201ENST00000364649 106 ntBASIC0.42□□□□□ -2.34
IGKV3D-20A0A0C4DH25 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
IGKV3D-20A0A0C4DH25 SNORD30.1-201ENST00000391309 70 ntBASIC0.42□□□□□ -2.34
IGKV3D-20A0A0C4DH25 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
IGKV3D-20A0A0C4DH25 SCARNA17.3-201ENST00000516381 125 ntBASIC0.42□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-175P-201ENST00000516896 107 ntBASIC0.42□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR6739-201ENST00000622461 75 ntBASIC0.42□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR103A1-201ENST00000362165 78 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR96-201ENST00000362288 78 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 SNORA2.1-201ENST00000363089 137 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 SNORD44.1-201ENST00000363202 61 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 Y_RNA.407-201ENST00000383986 113 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-649P-201ENST00000384463 107 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-800P-201ENST00000384473 103 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNU6-788P-201ENST00000390967 104 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 AL157398.1-201ENST00000452981 186 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 RNA5SP458-201ENST00000516188 119 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 MIR3925-201ENST00000584674 77 ntBASIC0.41□□□□□ -2.34
IGKV3D-20A0A0C4DH25 Y_RNA.125-201ENST00000363371 111 ntBASIC0.4□□□□□ -2.35
IGKV3D-20A0A0C4DH25 Y_RNA.443-201ENST00000384135 111 ntBASIC0.4□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNU6-630P-201ENST00000391258 106 ntBASIC0.4□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNU6-871P-201ENST00000516122 100 ntBASIC0.4□□□□□ -2.35
IGKV3D-20A0A0C4DH25 SNORA33.1-201ENST00000364957 130 ntBASIC0.39□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR520E-201ENST00000384867 87 ntBASIC0.39□□□□□ -2.35
IGKV3D-20A0A0C4DH25 TRMT112P2-201ENST00000512910 132 ntBASIC0.39□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNA5SP121-201ENST00000516537 101 ntBASIC0.39□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR4677-201ENST00000584153 80 ntBASIC0.39□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR8053-201ENST00000613344 75 ntBASIC0.39□□□□□ -2.35
IGKV3D-20A0A0C4DH25 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
IGKV3D-20A0A0C4DH25 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNU6-1216P-201ENST00000362590 107 ntBASIC0.38□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNU6-590P-201ENST00000365039 107 ntBASIC0.38□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR9-2-201ENST00000384838 87 ntBASIC0.38□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR7-2-201ENST00000384970 110 ntBASIC0.38□□□□□ -2.35
IGKV3D-20A0A0C4DH25 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.38□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR499B-201ENST00000636498 73 ntBASIC0.38□□□□□ -2.35
IGKV3D-20A0A0C4DH25 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNU6-337P-201ENST00000391243 106 ntBASIC0.37□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR548H2-201ENST00000408874 88 ntBASIC0.37□□□□□ -2.35
IGKV3D-20A0A0C4DH25 AC021146.9-201ENST00000512503 156 ntBASIC0.37□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNU7-188P-201ENST00000517063 64 ntBASIC0.37□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR5706-201ENST00000579841 80 ntBASIC0.37□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR548AG1-201ENST00000579932 66 ntBASIC0.37□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RN7SL660P-201ENST00000614852 299 ntBASIC0.37□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNU1-93P-201ENST00000364704 169 ntBASIC0.36□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR521-2-201ENST00000384818 87 ntBASIC0.36□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR516B1-201ENST00000385211 90 ntBASIC0.36□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNU6-321P-201ENST00000410912 106 ntBASIC0.36□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
IGKV3D-20A0A0C4DH25 RNA5SP102-201ENST00000516865 106 ntBASIC0.36□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR4498-201ENST00000577599 66 ntBASIC0.36□□□□□ -2.35
IGKV3D-20A0A0C4DH25 MIR548AD-201ENST00000584780 82 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms