Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 MIR1285-2-201ENST00000408311 88 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 AC244250.2-201ENST00000418731 148 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 MIR548AG2-201ENST00000581228 64 ntBASIC-0.15□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 RNU6-524P-201ENST00000384270 107 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 RNU6-616P-201ENST00000384353 107 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 AC025521.1-201ENST00000621624 286 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 MIR4320-201ENST00000636981 65 ntBASIC-0.16□□□□□ -2.43
SHANK1Q9Y566 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 SNORD114-29-201ENST00000364819 70 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 RNU6-971P-201ENST00000516920 106 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 MIR4473-201ENST00000583731 91 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 MIR4263-201ENST00000584745 83 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 AL391099.1-201ENST00000624635 187 ntBASIC-0.16□□□□□ -2.44
SHANK1Q9Y566 RNU6-811P-201ENST00000384069 107 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 AL158147.1-201ENST00000443970 75 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 MIR3613-201ENST00000579844 87 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 MIR4439-201ENST00000583746 80 ntBASIC-0.17□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-746P-201ENST00000384112 109 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-959P-201ENST00000384671 107 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 MTATP6P29-201ENST00000415057 132 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 SNORD116-10-201ENST00000363791 102 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 MIR548A3-201ENST00000385297 97 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 AL161932.1-201ENST00000437408 146 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 SPINT5P-201ENST00000448174 155 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNA5SP484-201ENST00000458857 111 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-65P-201ENST00000516332 98 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-62P-201ENST00000516526 102 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 MIR4752-201ENST00000579672 72 ntBASIC-0.18□□□□□ -2.44
SHANK1Q9Y566 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 AC096531.1-201ENST00000419107 107 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 RNU7-106P-201ENST00000459514 67 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR4436A-201ENST00000585278 85 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR196A2-201ENST00000385189 110 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 RNU6-972P-201ENST00000391208 107 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR548M-201ENST00000408260 86 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR4696-201ENST00000581431 70 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 MIR4788-201ENST00000639104 80 ntBASIC-0.19□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 MIR451A-201ENST00000385059 72 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 MIR2113-201ENST00000459007 91 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 RNU6-75P-201ENST00000515944 104 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 TRDV1-202ENST00000621643 102 ntBASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.2□□□□□ -2.44
SHANK1Q9Y566 SNORA63.2-201ENST00000362603 126 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 RNU6-10P-201ENST00000384036 107 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 AC008267.6-201ENST00000441664 139 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 RNU7-61P-201ENST00000515897 61 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR4460-201ENST00000577862 86 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 RNU7-24P-201ENST00000458867 62 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR3681-201ENST00000580089 72 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR3668-201ENST00000582138 75 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR8064-201ENST00000612863 90 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIR2052-201ENST00000636055 55 ntBASIC-0.21□□□□□ -2.44
SHANK1Q9Y566 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 RNA5SP275-201ENST00000363936 118 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 RNU6-907P-201ENST00000390924 102 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 RN7SL660P-201ENST00000614852 299 ntBASIC-0.22□□□□□ -2.44
SHANK1Q9Y566 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 YWHAEP2-201ENST00000580066 112 ntBASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.22□□□□□ -2.45
SHANK1Q9Y566 SNORD56B-201ENST00000384713 71 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 MIR587-201ENST00000384845 96 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 MIR4694-201ENST00000578534 80 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 SNORA7.5-201ENST00000410672 110 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 MIR548AZ-201ENST00000616567 95 ntBASIC-0.23□□□□□ -2.45
SHANK1Q9Y566 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 SNORA49-201ENST00000386157 136 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 RNU6-346P-201ENST00000516288 111 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.24□□□□□ -2.45
SHANK1Q9Y566 AC068339.1-201ENST00000526965 141 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 339.5 ms