Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC087343.1-201ENST00000477341 475 ntBASIC1.51□□□□□ -2.17
RTCBQ9Y3I0 RNU6-330P-201ENST00000363015 107 ntBASIC1.5□□□□□ -2.17
RTCBQ9Y3I0 MIR200A-201ENST00000384875 90 ntBASIC1.5□□□□□ -2.17
RTCBQ9Y3I0 MIR644A-201ENST00000385262 94 ntBASIC1.5□□□□□ -2.17
RTCBQ9Y3I0 MIR216B-201ENST00000390186 82 ntBASIC1.5□□□□□ -2.17
RTCBQ9Y3I0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RTCBQ9Y3I0 RNU6-469P-201ENST00000516253 101 ntBASIC1.5□□□□□ -2.17
RTCBQ9Y3I0 MIR548AG2-201ENST00000581228 64 ntBASIC1.5□□□□□ -2.17
RTCBQ9Y3I0 AC067863.3-201ENST00000624172 122 ntBASIC1.5□□□□□ -2.17
RTCBQ9Y3I0 MIR617-201ENST00000385030 97 ntBASIC1.49□□□□□ -2.17
RTCBQ9Y3I0 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
RTCBQ9Y3I0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.49□□□□□ -2.17
RTCBQ9Y3I0 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
RTCBQ9Y3I0 RNU6-634P-201ENST00000459134 106 ntBASIC1.48□□□□□ -2.17
RTCBQ9Y3I0 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
RTCBQ9Y3I0 MIR4639-201ENST00000584938 69 ntBASIC1.48□□□□□ -2.17
RTCBQ9Y3I0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
RTCBQ9Y3I0 MIR3675-201ENST00000583661 73 ntBASIC1.47□□□□□ -2.17
RTCBQ9Y3I0 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
RTCBQ9Y3I0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RTCBQ9Y3I0 RNU6-1241P-201ENST00000384536 107 ntBASIC1.46□□□□□ -2.18
RTCBQ9Y3I0 SNORD28-201ENST00000384706 75 ntBASIC1.46□□□□□ -2.18
RTCBQ9Y3I0 SNORD124-201ENST00000459577 104 ntBASIC1.46□□□□□ -2.18
RTCBQ9Y3I0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
RTCBQ9Y3I0 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.46□□□□□ -2.18
RTCBQ9Y3I0 RNA5SP325-201ENST00000363756 130 ntBASIC1.45□□□□□ -2.18
RTCBQ9Y3I0 MIR154-201ENST00000385243 84 ntBASIC1.45□□□□□ -2.18
RTCBQ9Y3I0 RNU6-539P-201ENST00000516665 103 ntBASIC1.45□□□□□ -2.18
RTCBQ9Y3I0 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.45□□□□□ -2.18
RTCBQ9Y3I0 AC244669.1-204ENST00000621564 178 ntBASIC1.45□□□□□ -2.18
RTCBQ9Y3I0 MIR4773-1-201ENST00000637203 78 ntBASIC1.45□□□□□ -2.18
RTCBQ9Y3I0 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
RTCBQ9Y3I0 AC025627.3-201ENST00000582078 182 ntBASIC1.44□□□□□ -2.18
RTCBQ9Y3I0 RNU6-590P-201ENST00000365039 107 ntBASIC1.43□□□□□ -2.18
RTCBQ9Y3I0 RNU6-382P-201ENST00000365181 106 ntBASIC1.43□□□□□ -2.18
RTCBQ9Y3I0 MIR573-201ENST00000384964 99 ntBASIC1.43□□□□□ -2.18
RTCBQ9Y3I0 MIR519E-201ENST00000385075 84 ntBASIC1.43□□□□□ -2.18
RTCBQ9Y3I0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.43□□□□□ -2.18
RTCBQ9Y3I0 RNU7-74P-201ENST00000459104 62 ntBASIC1.43□□□□□ -2.18
RTCBQ9Y3I0 RNU6-274P-201ENST00000459566 107 ntBASIC1.43□□□□□ -2.18
RTCBQ9Y3I0 Y_RNA.258-201ENST00000364613 105 ntBASIC1.42□□□□□ -2.18
RTCBQ9Y3I0 RNU6-752P-201ENST00000516376 102 ntBASIC1.42□□□□□ -2.18
RTCBQ9Y3I0 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
RTCBQ9Y3I0 SNORA25.8-201ENST00000364831 128 ntBASIC1.41□□□□□ -2.18
RTCBQ9Y3I0 SNORD114-24-201ENST00000365029 72 ntBASIC1.41□□□□□ -2.18
RTCBQ9Y3I0 SNORD41.1-201ENST00000391000 69 ntBASIC1.41□□□□□ -2.18
RTCBQ9Y3I0 MIR3612-201ENST00000579753 87 ntBASIC1.41□□□□□ -2.18
RTCBQ9Y3I0 SNORD18A-201ENST00000363753 72 ntBASIC1.4□□□□□ -2.19
RTCBQ9Y3I0 MIR548L-201ENST00000408303 86 ntBASIC1.4□□□□□ -2.19
RTCBQ9Y3I0 RNA5SP436-201ENST00000516020 115 ntBASIC1.4□□□□□ -2.19
RTCBQ9Y3I0 MIR3678-201ENST00000578455 94 ntBASIC1.4□□□□□ -2.19
RTCBQ9Y3I0 MIR548O2-201ENST00000616090 70 ntBASIC1.4□□□□□ -2.19
RTCBQ9Y3I0 RNU1-124P-201ENST00000363861 145 ntBASIC1.39□□□□□ -2.19
RTCBQ9Y3I0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.39□□□□□ -2.19
RTCBQ9Y3I0 RNU6-649P-201ENST00000384463 107 ntBASIC1.39□□□□□ -2.19
RTCBQ9Y3I0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.39□□□□□ -2.19
RTCBQ9Y3I0 SNORD75.2-201ENST00000408784 58 ntBASIC1.39□□□□□ -2.19
RTCBQ9Y3I0 RNU7-24P-201ENST00000458867 62 ntBASIC1.39□□□□□ -2.19
RTCBQ9Y3I0 RNA5SP404-201ENST00000517118 132 ntBASIC1.39□□□□□ -2.19
RTCBQ9Y3I0 RNA5SP47-201ENST00000517230 109 ntBASIC1.39□□□□□ -2.19
RTCBQ9Y3I0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
RTCBQ9Y3I0 MIR373-201ENST00000362273 69 ntBASIC1.38□□□□□ -2.19
RTCBQ9Y3I0 RNU6-495P-201ENST00000362995 107 ntBASIC1.38□□□□□ -2.19
RTCBQ9Y3I0 SNORD115-31-201ENST00000365318 82 ntBASIC1.38□□□□□ -2.19
RTCBQ9Y3I0 RNU6-540P-201ENST00000384622 101 ntBASIC1.38□□□□□ -2.19
RTCBQ9Y3I0 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
RTCBQ9Y3I0 SNORD45.1-201ENST00000363181 77 ntBASIC1.37□□□□□ -2.19
RTCBQ9Y3I0 AC244098.3-201ENST00000424803 96 ntBASIC1.37□□□□□ -2.19
RTCBQ9Y3I0 RNA5SP255-201ENST00000516370 107 ntBASIC1.37□□□□□ -2.19
RTCBQ9Y3I0 RNU6-726P-201ENST00000364680 107 ntBASIC1.36□□□□□ -2.19
RTCBQ9Y3I0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
RTCBQ9Y3I0 SNORD30.1-201ENST00000391309 70 ntBASIC1.36□□□□□ -2.19
RTCBQ9Y3I0 AL691482.2-201ENST00000457453 84 ntBASIC1.36□□□□□ -2.19
RTCBQ9Y3I0 AC211469.2-201ENST00000605461 205 ntBASIC1.36□□□□□ -2.19
RTCBQ9Y3I0 MIR8053-201ENST00000613344 75 ntBASIC1.36□□□□□ -2.19
RTCBQ9Y3I0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
RTCBQ9Y3I0 Y_RNA.386-201ENST00000383913 105 ntBASIC1.35□□□□□ -2.19
RTCBQ9Y3I0 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
RTCBQ9Y3I0 MIR5000-201ENST00000577717 103 ntBASIC1.35□□□□□ -2.19
RTCBQ9Y3I0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RTCBQ9Y3I0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
RTCBQ9Y3I0 Y_RNA.205-201ENST00000364128 113 ntBASIC1.34□□□□□ -2.19
RTCBQ9Y3I0 RNU6-716P-201ENST00000365621 103 ntBASIC1.34□□□□□ -2.19
RTCBQ9Y3I0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RTCBQ9Y3I0 AC093423.1-201ENST00000440817 142 ntBASIC1.34□□□□□ -2.19
RTCBQ9Y3I0 SCARNA16.5-201ENST00000517114 183 ntBASIC1.34□□□□□ -2.19
RTCBQ9Y3I0 RNU6-663P-201ENST00000391105 106 ntBASIC1.33□□□□□ -2.2
RTCBQ9Y3I0 SNORD114-21-201ENST00000606412 72 ntBASIC1.33□□□□□ -2.2
RTCBQ9Y3I0 RNU6-54P-201ENST00000365563 107 ntBASIC1.32□□□□□ -2.2
RTCBQ9Y3I0 RNU6V-201ENST00000384105 107 ntBASIC1.32□□□□□ -2.2
RTCBQ9Y3I0 RNU6-895P-201ENST00000384125 103 ntBASIC1.32□□□□□ -2.2
RTCBQ9Y3I0 NAMPTP3-201ENST00000569273 224 ntBASIC1.32□□□□□ -2.2
RTCBQ9Y3I0 SNORD45A-201ENST00000384512 84 ntBASIC1.31□□□□□ -2.2
RTCBQ9Y3I0 SNORD99-201ENST00000408612 74 ntBASIC1.31□□□□□ -2.2
RTCBQ9Y3I0 MIR4460-201ENST00000577862 86 ntBASIC1.31□□□□□ -2.2
RTCBQ9Y3I0 AC011195.1-201ENST00000578177 177 ntBASIC1.31□□□□□ -2.2
RTCBQ9Y3I0 SNORD115-22-201ENST00000364456 82 ntBASIC1.3□□□□□ -2.2
RTCBQ9Y3I0 RNU6-1039P-201ENST00000383931 107 ntBASIC1.3□□□□□ -2.2
RTCBQ9Y3I0 MT-TY-201ENST00000387409 66 ntBASIC1.3□□□□□ -2.2
RTCBQ9Y3I0 MIR1265-201ENST00000408444 86 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms