Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.58□□□□□ -2.5
SHROOM4Q9ULL8 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.59□□□□□ -2.5
SHROOM4Q9ULL8 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.59□□□□□ -2.5
SHROOM4Q9ULL8 MIR587-201ENST00000384845 96 ntBASIC-0.59□□□□□ -2.5
SHROOM4Q9ULL8 SNORA3B-201ENST00000391305 131 ntBASIC-0.59□□□□□ -2.5
SHROOM4Q9ULL8 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.59□□□□□ -2.5
SHROOM4Q9ULL8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.59□□□□□ -2.5
SHROOM4Q9ULL8 AL157777.2-201ENST00000258070 137 ntBASIC-0.6□□□□□ -2.5
SHROOM4Q9ULL8 RNU6-957P-201ENST00000363652 99 ntBASIC-0.6□□□□□ -2.5
SHROOM4Q9ULL8 SNORD114-29-201ENST00000364819 70 ntBASIC-0.6□□□□□ -2.5
SHROOM4Q9ULL8 SNORA51.5-201ENST00000384126 131 ntBASIC-0.6□□□□□ -2.5
SHROOM4Q9ULL8 MIR4679-2-201ENST00000578358 77 ntBASIC-0.6□□□□□ -2.5
SHROOM4Q9ULL8 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.61□□□□□ -2.51
SHROOM4Q9ULL8 AL161932.1-201ENST00000437408 146 ntBASIC-0.61□□□□□ -2.51
SHROOM4Q9ULL8 AL353813.1-201ENST00000440700 253 ntBASIC-0.61□□□□□ -2.51
SHROOM4Q9ULL8 MT-TY-201ENST00000387409 66 ntBASIC-0.61□□□□□ -2.51
SHROOM4Q9ULL8 RNU6-466P-201ENST00000391224 103 ntBASIC-0.61□□□□□ -2.51
SHROOM4Q9ULL8 RNU6-257P-201ENST00000410238 98 ntBASIC-0.61□□□□□ -2.51
SHROOM4Q9ULL8 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.61□□□□□ -2.51
SHROOM4Q9ULL8 RNU7-188P-201ENST00000517063 64 ntBASIC-0.61□□□□□ -2.51
SHROOM4Q9ULL8 MIR378F-201ENST00000578143 78 ntBASIC-0.61□□□□□ -2.51
SHROOM4Q9ULL8 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.62□□□□□ -2.51
SHROOM4Q9ULL8 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.62□□□□□ -2.51
SHROOM4Q9ULL8 RNA5SP66-201ENST00000517178 101 ntBASIC-0.62□□□□□ -2.51
SHROOM4Q9ULL8 U6.100-201ENST00000636230 99 ntBASIC-0.62□□□□□ -2.51
SHROOM4Q9ULL8 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.63□□□□□ -2.51
SHROOM4Q9ULL8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.63□□□□□ -2.51
SHROOM4Q9ULL8 MIR4280-201ENST00000582178 76 ntBASIC-0.63□□□□□ -2.51
SHROOM4Q9ULL8 RNU6-664P-201ENST00000362381 107 ntBASIC-0.64□□□□□ -2.51
SHROOM4Q9ULL8 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.64□□□□□ -2.51
SHROOM4Q9ULL8 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.64□□□□□ -2.51
SHROOM4Q9ULL8 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.64□□□□□ -2.51
SHROOM4Q9ULL8 RNU6-455P-201ENST00000384681 107 ntBASIC-0.65□□□□□ -2.51
SHROOM4Q9ULL8 RNU6-175P-201ENST00000516896 107 ntBASIC-0.65□□□□□ -2.51
SHROOM4Q9ULL8 SNORD114-14-201ENST00000362723 75 ntBASIC-0.66□□□□□ -2.51
SHROOM4Q9ULL8 RNY1P5-201ENST00000383890 115 ntBASIC-0.66□□□□□ -2.51
SHROOM4Q9ULL8 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.66□□□□□ -2.51
SHROOM4Q9ULL8 RNU6-772P-201ENST00000516042 105 ntBASIC-0.66□□□□□ -2.51
SHROOM4Q9ULL8 AC007012.1-201ENST00000567192 175 ntBASIC-0.66□□□□□ -2.51
SHROOM4Q9ULL8 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.67□□□□□ -2.52
SHROOM4Q9ULL8 SNORD101-201ENST00000384027 73 ntBASIC-0.67□□□□□ -2.52
SHROOM4Q9ULL8 MIR204-201ENST00000385200 110 ntBASIC-0.67□□□□□ -2.52
SHROOM4Q9ULL8 MIR196A1-201ENST00000388006 70 ntBASIC-0.67□□□□□ -2.52
SHROOM4Q9ULL8 AL445193.1-201ENST00000441183 141 ntBASIC-0.67□□□□□ -2.52
SHROOM4Q9ULL8 MIR9-2-201ENST00000384838 87 ntBASIC-0.67□□□□□ -2.52
SHROOM4Q9ULL8 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.67□□□□□ -2.52
SHROOM4Q9ULL8 SNORD38.3-201ENST00000516599 73 ntBASIC-0.67□□□□□ -2.52
SHROOM4Q9ULL8 RNU6-86P-201ENST00000606534 107 ntBASIC-0.67□□□□□ -2.52
SHROOM4Q9ULL8 MIR577-201ENST00000385196 96 ntBASIC-0.68□□□□□ -2.52
SHROOM4Q9ULL8 AC093726.3-201ENST00000637588 150 ntBASIC-0.68□□□□□ -2.52
SHROOM4Q9ULL8 SNORD114-25-201ENST00000363742 72 ntBASIC-0.69□□□□□ -2.52
SHROOM4Q9ULL8 RNU6-10P-201ENST00000384036 107 ntBASIC-0.69□□□□□ -2.52
SHROOM4Q9ULL8 MIR4694-201ENST00000578534 80 ntBASIC-0.69□□□□□ -2.52
SHROOM4Q9ULL8 RNU6-80P-201ENST00000384195 107 ntBASIC-0.7□□□□□ -2.52
SHROOM4Q9ULL8 SNORD56B-201ENST00000384713 71 ntBASIC-0.7□□□□□ -2.52
SHROOM4Q9ULL8 MIR4696-201ENST00000581431 70 ntBASIC-0.7□□□□□ -2.52
SHROOM4Q9ULL8 MIR365A-201ENST00000362260 87 ntBASIC-0.71□□□□□ -2.52
SHROOM4Q9ULL8 RNU6-721P-201ENST00000410155 105 ntBASIC-0.71□□□□□ -2.52
SHROOM4Q9ULL8 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.71□□□□□ -2.52
SHROOM4Q9ULL8 RNU6-346P-201ENST00000516288 111 ntBASIC-0.71□□□□□ -2.52
SHROOM4Q9ULL8 MIR548AE1-201ENST00000583292 70 ntBASIC-0.71□□□□□ -2.52
SHROOM4Q9ULL8 MIR20A-201ENST00000362279 71 ntBASIC-0.72□□□□□ -2.52
SHROOM4Q9ULL8 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.72□□□□□ -2.52
SHROOM4Q9ULL8 RNU6-154P-201ENST00000384306 106 ntBASIC-0.72□□□□□ -2.52
SHROOM4Q9ULL8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.72□□□□□ -2.52
SHROOM4Q9ULL8 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.72□□□□□ -2.52
SHROOM4Q9ULL8 AC068339.1-201ENST00000526965 141 ntBASIC-0.72□□□□□ -2.52
SHROOM4Q9ULL8 AP000676.1-201ENST00000533307 52 ntBASIC-0.72□□□□□ -2.52
SHROOM4Q9ULL8 RNU6-832P-201ENST00000363319 107 ntBASIC-0.73□□□□□ -2.53
SHROOM4Q9ULL8 RNU6-901P-201ENST00000384593 106 ntBASIC-0.73□□□□□ -2.53
SHROOM4Q9ULL8 RNU6-907P-201ENST00000390924 102 ntBASIC-0.73□□□□□ -2.53
SHROOM4Q9ULL8 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.73□□□□□ -2.53
SHROOM4Q9ULL8 RNU6-881P-201ENST00000516813 102 ntBASIC-0.73□□□□□ -2.53
SHROOM4Q9ULL8 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.74□□□□□ -2.53
SHROOM4Q9ULL8 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.74□□□□□ -2.53
SHROOM4Q9ULL8 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.74□□□□□ -2.53
SHROOM4Q9ULL8 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
SHROOM4Q9ULL8 RNU6-971P-201ENST00000516920 106 ntBASIC-0.74□□□□□ -2.53
SHROOM4Q9ULL8 RNU6-255P-201ENST00000516957 105 ntBASIC-0.74□□□□□ -2.53
SHROOM4Q9ULL8 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.75□□□□□ -2.53
SHROOM4Q9ULL8 RNU6-900P-201ENST00000384498 102 ntBASIC-0.75□□□□□ -2.53
SHROOM4Q9ULL8 AC021146.6-201ENST00000514659 117 ntBASIC-0.75□□□□□ -2.53
SHROOM4Q9ULL8 MIR4536-1-201ENST00000583537 88 ntBASIC-0.75□□□□□ -2.53
SHROOM4Q9ULL8 MIR6738-201ENST00000619620 64 ntBASIC-0.75□□□□□ -2.53
SHROOM4Q9ULL8 RNY3P2-201ENST00000362918 102 ntBASIC-0.76□□□□□ -2.53
SHROOM4Q9ULL8 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.76□□□□□ -2.53
SHROOM4Q9ULL8 SNORD83B-201ENST00000386745 93 ntBASIC-0.76□□□□□ -2.53
SHROOM4Q9ULL8 AL500527.2-201ENST00000454105 95 ntBASIC-0.76□□□□□ -2.53
SHROOM4Q9ULL8 MIR4439-201ENST00000583746 80 ntBASIC-0.76□□□□□ -2.53
SHROOM4Q9ULL8 RNU7-107P-201ENST00000459121 61 ntBASIC-0.77□□□□□ -2.53
SHROOM4Q9ULL8 MIR3671-201ENST00000580455 88 ntBASIC-0.77□□□□□ -2.53
SHROOM4Q9ULL8 MIR6851-201ENST00000617060 67 ntBASIC-0.77□□□□□ -2.53
SHROOM4Q9ULL8 RNY1P7-201ENST00000384743 110 ntBASIC-0.78□□□□□ -2.53
SHROOM4Q9ULL8 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.78□□□□□ -2.53
SHROOM4Q9ULL8 RNU6-65P-201ENST00000516332 98 ntBASIC-0.78□□□□□ -2.53
SHROOM4Q9ULL8 MIR518B-201ENST00000385127 83 ntBASIC-0.79□□□□□ -2.54
SHROOM4Q9ULL8 snoU13.13-201ENST00000458842 104 ntBASIC-0.79□□□□□ -2.54
SHROOM4Q9ULL8 MIR3179-1-201ENST00000578940 84 ntBASIC-0.79□□□□□ -2.54
SHROOM4Q9ULL8 MIR3179-2-201ENST00000579107 84 ntBASIC-0.79□□□□□ -2.54
SHROOM4Q9ULL8 MIR3179-3-201ENST00000579566 84 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms