Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 SNORA63.6-201ENST00000364921 119 ntBASIC-1.47□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.47□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.47□□□□□ -2.64
HPF1Q9NWY4 MIR124-2-201ENST00000385081 109 ntBASIC-1.47□□□□□ -2.64
HPF1Q9NWY4 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.47□□□□□ -2.64
HPF1Q9NWY4 AC140658.3-201ENST00000567603 271 ntBASIC-1.47□□□□□ -2.64
HPF1Q9NWY4 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.48□□□□□ -2.65
HPF1Q9NWY4 RNU6-10P-201ENST00000384036 107 ntBASIC-1.48□□□□□ -2.65
HPF1Q9NWY4 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.48□□□□□ -2.65
HPF1Q9NWY4 AL500527.2-201ENST00000454105 95 ntBASIC-1.48□□□□□ -2.65
HPF1Q9NWY4 RNU7-197P-201ENST00000458836 62 ntBASIC-1.48□□□□□ -2.65
HPF1Q9NWY4 RNU6-75P-201ENST00000515944 104 ntBASIC-1.48□□□□□ -2.65
HPF1Q9NWY4 AP001094.1-201ENST00000579805 193 ntBASIC-1.48□□□□□ -2.65
HPF1Q9NWY4 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.49□□□□□ -2.65
HPF1Q9NWY4 SNORD64-201ENST00000386683 67 ntBASIC-1.49□□□□□ -2.65
HPF1Q9NWY4 RNU6-816P-201ENST00000390914 107 ntBASIC-1.49□□□□□ -2.65
HPF1Q9NWY4 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.49□□□□□ -2.65
HPF1Q9NWY4 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.49□□□□□ -2.65
HPF1Q9NWY4 RNU6-592P-201ENST00000411333 103 ntBASIC-1.49□□□□□ -2.65
HPF1Q9NWY4 MTCYBP9-201ENST00000431021 303 ntBASIC-1.49□□□□□ -2.65
HPF1Q9NWY4 AC025521.1-201ENST00000621624 286 ntBASIC-1.49□□□□□ -2.65
HPF1Q9NWY4 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.5□□□□□ -2.65
HPF1Q9NWY4 MIRLET7B-201ENST00000385140 83 ntBASIC-1.5□□□□□ -2.65
HPF1Q9NWY4 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.5□□□□□ -2.65
HPF1Q9NWY4 AC141273.2-201ENST00000618989 130 ntBASIC-1.5□□□□□ -2.65
HPF1Q9NWY4 RNY4P6-201ENST00000363667 96 ntBASIC-1.51□□□□□ -2.65
HPF1Q9NWY4 RNU6-151P-201ENST00000364158 107 ntBASIC-1.51□□□□□ -2.65
HPF1Q9NWY4 MIR4324-201ENST00000584846 72 ntBASIC-1.51□□□□□ -2.65
HPF1Q9NWY4 RNU6-274P-201ENST00000459566 107 ntBASIC-1.52□□□□□ -2.65
HPF1Q9NWY4 U6.96-201ENST00000636425 70 ntBASIC-1.52□□□□□ -2.65
HPF1Q9NWY4 MIR568-201ENST00000385036 95 ntBASIC-1.53□□□□□ -2.65
HPF1Q9NWY4 RNU6-337P-201ENST00000391243 106 ntBASIC-1.53□□□□□ -2.65
HPF1Q9NWY4 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.53□□□□□ -2.65
HPF1Q9NWY4 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.53□□□□□ -2.65
HPF1Q9NWY4 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.53□□□□□ -2.65
HPF1Q9NWY4 MIR4499-201ENST00000584834 69 ntBASIC-1.53□□□□□ -2.65
HPF1Q9NWY4 RNU4-32P-201ENST00000363404 141 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 SNORD114-17-201ENST00000364699 75 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 SNORA62.4-201ENST00000365504 151 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 RNU6-431P-201ENST00000383874 107 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 RNU6-738P-201ENST00000384531 106 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 MIR513C-201ENST00000401352 84 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 AC021146.9-201ENST00000512503 156 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 snoU83B.1-201ENST00000517136 88 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.54□□□□□ -2.66
HPF1Q9NWY4 RNU6-208P-201ENST00000362431 107 ntBASIC-1.55□□□□□ -2.66
HPF1Q9NWY4 SNORD115-23-201ENST00000364461 82 ntBASIC-1.55□□□□□ -2.66
HPF1Q9NWY4 SNORA63-201ENST00000363450 132 ntBASIC-1.56□□□□□ -2.66
HPF1Q9NWY4 RNU6-781P-201ENST00000516377 101 ntBASIC-1.56□□□□□ -2.66
HPF1Q9NWY4 MIR3140-201ENST00000583685 90 ntBASIC-1.56□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.56□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.56□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.56□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.56□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.56□□□□□ -2.66
HPF1Q9NWY4 MIR4320-201ENST00000636981 65 ntBASIC-1.56□□□□□ -2.66
HPF1Q9NWY4 RNU6-990P-201ENST00000364385 104 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 SNORD50.2-201ENST00000365465 70 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 MIR548U-201ENST00000390728 81 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 SNX3P1X-201ENST00000414887 175 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.57□□□□□ -2.66
HPF1Q9NWY4 SNORA63.2-201ENST00000362603 126 ntBASIC-1.58□□□□□ -2.66
HPF1Q9NWY4 RNU6-495P-201ENST00000362995 107 ntBASIC-1.58□□□□□ -2.66
HPF1Q9NWY4 MIR147A-201ENST00000385079 72 ntBASIC-1.58□□□□□ -2.66
HPF1Q9NWY4 RNU6-861P-201ENST00000516745 106 ntBASIC-1.58□□□□□ -2.66
HPF1Q9NWY4 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.59□□□□□ -2.66
HPF1Q9NWY4 RNU6-132P-201ENST00000383863 107 ntBASIC-1.59□□□□□ -2.66
HPF1Q9NWY4 AL158147.1-201ENST00000443970 75 ntBASIC-1.59□□□□□ -2.66
HPF1Q9NWY4 AL513043.2-201ENST00000573941 143 ntBASIC-1.59□□□□□ -2.66
HPF1Q9NWY4 MIR382-201ENST00000637119 76 ntBASIC-1.59□□□□□ -2.66
HPF1Q9NWY4 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.6□□□□□ -2.67
HPF1Q9NWY4 AL118496.2-201ENST00000448300 230 ntBASIC-1.6□□□□□ -2.67
HPF1Q9NWY4 RNU7-85P-201ENST00000458851 63 ntBASIC-1.6□□□□□ -2.67
HPF1Q9NWY4 YWHAEP3-201ENST00000582767 121 ntBASIC-1.61□□□□□ -2.67
HPF1Q9NWY4 AP001340.1-201ENST00000624405 217 ntBASIC-1.61□□□□□ -2.67
HPF1Q9NWY4 MIR577-201ENST00000385196 96 ntBASIC-1.62□□□□□ -2.67
HPF1Q9NWY4 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.62□□□□□ -2.67
HPF1Q9NWY4 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.62□□□□□ -2.67
HPF1Q9NWY4 AC068339.1-201ENST00000526965 141 ntBASIC-1.62□□□□□ -2.67
HPF1Q9NWY4 AC025166.1-201ENST00000612411 163 ntBASIC-1.62□□□□□ -2.67
HPF1Q9NWY4 SCARNA18B-201ENST00000458806 135 ntBASIC-1.63□□□□□ -2.67
HPF1Q9NWY4 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.63□□□□□ -2.67
HPF1Q9NWY4 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.64□□□□□ -2.67
HPF1Q9NWY4 MIR3064-201ENST00000581130 66 ntBASIC-1.64□□□□□ -2.67
HPF1Q9NWY4 AL353803.5-201ENST00000599815 141 ntBASIC-1.64□□□□□ -2.67
HPF1Q9NWY4 RNU6-24P-201ENST00000384440 107 ntBASIC-1.65□□□□□ -2.67
HPF1Q9NWY4 SNORA81.3-201ENST00000517283 198 ntBASIC-1.65□□□□□ -2.67
HPF1Q9NWY4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.65□□□□□ -2.67
HPF1Q9NWY4 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.66□□□□□ -2.68
HPF1Q9NWY4 MIR4694-201ENST00000578534 80 ntBASIC-1.66□□□□□ -2.68
HPF1Q9NWY4 AC104996.3-201ENST00000590718 94 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 243.9 ms