Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SNORD60.1-201ENST00000362451 73 ntBASIC1.8□□□□□ -2.12
PRDM9Q9NQV7 MIR764-201ENST00000390811 85 ntBASIC1.8□□□□□ -2.12
PRDM9Q9NQV7 AL157398.1-201ENST00000452981 186 ntBASIC1.8□□□□□ -2.12
PRDM9Q9NQV7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PRDM9Q9NQV7 SNORD18A-201ENST00000363753 72 ntBASIC1.79□□□□□ -2.12
PRDM9Q9NQV7 SNORA8.2-201ENST00000384372 139 ntBASIC1.79□□□□□ -2.12
PRDM9Q9NQV7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.79□□□□□ -2.12
PRDM9Q9NQV7 AC002429.1-201ENST00000437672 148 ntBASIC1.78□□□□□ -2.12
PRDM9Q9NQV7 MIR7978-201ENST00000636158 59 ntBASIC1.78□□□□□ -2.12
PRDM9Q9NQV7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 MIR222-201ENST00000384992 110 ntBASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 SNORD105-201ENST00000386910 85 ntBASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 FABP5P4-201ENST00000437203 171 ntBASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PRDM9Q9NQV7 SNORD113-2-201ENST00000391082 72 ntBASIC1.76□□□□□ -2.13
PRDM9Q9NQV7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.76□□□□□ -2.13
PRDM9Q9NQV7 SCARNA16.5-201ENST00000517114 183 ntBASIC1.76□□□□□ -2.13
PRDM9Q9NQV7 MIR548V-201ENST00000584165 80 ntBASIC1.76□□□□□ -2.13
PRDM9Q9NQV7 SNORA15B-2-201ENST00000384058 135 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 SNORA15B-1-201ENST00000384334 135 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 RNU6-1184P-201ENST00000384588 108 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 SNORA75.1-201ENST00000391130 148 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 AL603825.1-201ENST00000438481 80 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 U7.7-201ENST00000459276 60 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
PRDM9Q9NQV7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 RNU6-698P-201ENST00000363523 107 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 RNU6-34P-201ENST00000364874 107 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 RNU6-936P-201ENST00000384005 107 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 RNU6-295P-201ENST00000516901 104 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 uc_338.10-201ENST00000621872 182 ntBASIC1.74□□□□□ -2.13
PRDM9Q9NQV7 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 SNORD113-4-201ENST00000364802 75 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 AC021146.9-201ENST00000512503 156 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 RNU1-92P-201ENST00000517017 135 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 RNU6-548P-201ENST00000517083 115 ntBASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
PRDM9Q9NQV7 SNORA25-201ENST00000384384 134 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 MIR573-201ENST00000384964 99 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 MIR517B-201ENST00000385102 67 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 RNU6-269P-201ENST00000391077 97 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 RNU7-174P-201ENST00000516248 59 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 MIR6845-201ENST00000613182 61 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 AL162376.1-201ENST00000624117 175 ntBASIC1.72□□□□□ -2.13
PRDM9Q9NQV7 RNU6-716P-201ENST00000365621 103 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 MIR758-201ENST00000390227 88 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 SNORD89-201ENST00000390981 114 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 SNORA26.9-201ENST00000391322 122 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 RNA5SP484-201ENST00000458857 111 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 AL353997.5-201ENST00000618886 171 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 U2.7-201ENST00000619197 100 ntBASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PRDM9Q9NQV7 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 RNU6-520P-201ENST00000384717 104 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 MIR548C-201ENST00000384815 97 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 MIR630-201ENST00000384957 97 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 Y_RNA.633-201ENST00000459107 95 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 MIR3678-201ENST00000578455 94 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.7□□□□□ -2.14
PRDM9Q9NQV7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 SNORA63.6-201ENST00000364921 119 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 MIR19B1-201ENST00000384829 87 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 RNA5SP458-201ENST00000516188 119 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 RNU5B-6P-201ENST00000516765 68 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 MIR6828-201ENST00000636181 60 ntBASIC1.69□□□□□ -2.14
PRDM9Q9NQV7 SCARNA17.3-201ENST00000516381 125 ntBASIC1.68□□□□□ -2.14
PRDM9Q9NQV7 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
PRDM9Q9NQV7 Y_RNA.407-201ENST00000383986 113 ntBASIC1.67□□□□□ -2.14
PRDM9Q9NQV7 MIR200A-201ENST00000384875 90 ntBASIC1.67□□□□□ -2.14
PRDM9Q9NQV7 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
PRDM9Q9NQV7 MIR3612-201ENST00000579753 87 ntBASIC1.67□□□□□ -2.14
PRDM9Q9NQV7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 U4.4-201ENST00000620626 117 ntBASIC1.66□□□□□ -2.14
PRDM9Q9NQV7 snoU13.13-201ENST00000458842 104 ntBASIC1.65□□□□□ -2.15
PRDM9Q9NQV7 Y_RNA.125-201ENST00000363371 111 ntBASIC1.64□□□□□ -2.15
PRDM9Q9NQV7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.64□□□□□ -2.15
PRDM9Q9NQV7 AC025627.3-201ENST00000582078 182 ntBASIC1.64□□□□□ -2.15
PRDM9Q9NQV7 SNORD48-201ENST00000364953 64 ntBASIC1.63□□□□□ -2.15
PRDM9Q9NQV7 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
PRDM9Q9NQV7 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
PRDM9Q9NQV7 SNORA33.1-201ENST00000364957 130 ntBASIC1.62□□□□□ -2.15
PRDM9Q9NQV7 RNU4-45P-201ENST00000365469 141 ntBASIC1.62□□□□□ -2.15
PRDM9Q9NQV7 MIR8081-201ENST00000611533 95 ntBASIC1.62□□□□□ -2.15
PRDM9Q9NQV7 RNU7-119P-201ENST00000459279 63 ntBASIC1.61□□□□□ -2.15
PRDM9Q9NQV7 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
PRDM9Q9NQV7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms