Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6V-201ENST00000384105 107 ntBASIC1.2□□□□□ -2.22
SSU72Q9NP77 SNORD45A-201ENST00000384512 84 ntBASIC1.2□□□□□ -2.22
SSU72Q9NP77 RNU6-269P-201ENST00000391077 97 ntBASIC1.2□□□□□ -2.22
SSU72Q9NP77 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
SSU72Q9NP77 SNORD13-201ENST00000459299 104 ntBASIC1.2□□□□□ -2.22
SSU72Q9NP77 RNU6-274P-201ENST00000459566 107 ntBASIC1.2□□□□□ -2.22
SSU72Q9NP77 SCARNA16.5-201ENST00000517114 183 ntBASIC1.2□□□□□ -2.22
SSU72Q9NP77 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
SSU72Q9NP77 MIR18A-201ENST00000362310 71 ntBASIC1.19□□□□□ -2.22
SSU72Q9NP77 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SSU72Q9NP77 RNU6-752P-201ENST00000516376 102 ntBASIC1.19□□□□□ -2.22
SSU72Q9NP77 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SSU72Q9NP77 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
SSU72Q9NP77 RNU6-1039P-201ENST00000383931 107 ntBASIC1.18□□□□□ -2.22
SSU72Q9NP77 RNU6-649P-201ENST00000384463 107 ntBASIC1.18□□□□□ -2.22
SSU72Q9NP77 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
SSU72Q9NP77 MT-TY-201ENST00000387409 66 ntBASIC1.18□□□□□ -2.22
SSU72Q9NP77 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SSU72Q9NP77 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.18□□□□□ -2.22
SSU72Q9NP77 AC011195.1-201ENST00000578177 177 ntBASIC1.18□□□□□ -2.22
SSU72Q9NP77 MIR378A-201ENST00000362177 66 ntBASIC1.17□□□□□ -2.22
SSU72Q9NP77 RNU1-141P-201ENST00000364623 158 ntBASIC1.17□□□□□ -2.22
SSU72Q9NP77 RNU7-74P-201ENST00000459104 62 ntBASIC1.17□□□□□ -2.22
SSU72Q9NP77 SNORA40.17-201ENST00000517256 115 ntBASIC1.17□□□□□ -2.22
SSU72Q9NP77 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
SSU72Q9NP77 Y_RNA.338-201ENST00000365320 114 ntBASIC1.16□□□□□ -2.22
SSU72Q9NP77 RNU6-604P-201ENST00000390917 100 ntBASIC1.16□□□□□ -2.22
SSU72Q9NP77 AL603825.1-201ENST00000438481 80 ntBASIC1.16□□□□□ -2.22
SSU72Q9NP77 AL691482.2-201ENST00000457453 84 ntBASIC1.16□□□□□ -2.22
SSU72Q9NP77 AL162376.1-201ENST00000624117 175 ntBASIC1.16□□□□□ -2.22
SSU72Q9NP77 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SSU72Q9NP77 SNORD116-24-201ENST00000384549 92 ntBASIC1.15□□□□□ -2.23
SSU72Q9NP77 RNU6-663P-201ENST00000391105 106 ntBASIC1.15□□□□□ -2.23
SSU72Q9NP77 SNORD30.1-201ENST00000391309 70 ntBASIC1.15□□□□□ -2.23
SSU72Q9NP77 MIR548L-201ENST00000408303 86 ntBASIC1.15□□□□□ -2.23
SSU72Q9NP77 U6.111-201ENST00000636093 83 ntBASIC1.15□□□□□ -2.23
SSU72Q9NP77 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SSU72Q9NP77 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SSU72Q9NP77 SNORD113.1-201ENST00000363280 73 ntBASIC1.14□□□□□ -2.23
SSU72Q9NP77 SNORA8.2-201ENST00000384372 139 ntBASIC1.14□□□□□ -2.23
SSU72Q9NP77 MIR1265-201ENST00000408444 86 ntBASIC1.14□□□□□ -2.23
SSU72Q9NP77 AC108667.1-201ENST00000428618 249 ntBASIC1.14□□□□□ -2.23
SSU72Q9NP77 RNA5SP484-201ENST00000458857 111 ntBASIC1.14□□□□□ -2.23
SSU72Q9NP77 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
SSU72Q9NP77 MIR203A-201ENST00000384836 110 ntBASIC1.13□□□□□ -2.23
SSU72Q9NP77 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.13□□□□□ -2.23
SSU72Q9NP77 AC018659.1-201ENST00000551083 169 ntBASIC1.13□□□□□ -2.23
SSU72Q9NP77 MIR4460-201ENST00000577862 86 ntBASIC1.13□□□□□ -2.23
SSU72Q9NP77 snoU13.31-201ENST00000607291 104 ntBASIC1.13□□□□□ -2.23
SSU72Q9NP77 MIR8053-201ENST00000613344 75 ntBASIC1.13□□□□□ -2.23
SSU72Q9NP77 MIR6509-201ENST00000614603 85 ntBASIC1.13□□□□□ -2.23
SSU72Q9NP77 RNU6-800P-201ENST00000384473 103 ntBASIC1.12□□□□□ -2.23
SSU72Q9NP77 RNU6-881P-201ENST00000516813 102 ntBASIC1.12□□□□□ -2.23
SSU72Q9NP77 RNA5SP94-201ENST00000516917 108 ntBASIC1.12□□□□□ -2.23
SSU72Q9NP77 MIR4498-201ENST00000577599 66 ntBASIC1.12□□□□□ -2.23
SSU72Q9NP77 AL353765.1-201ENST00000605514 183 ntBASIC1.12□□□□□ -2.23
SSU72Q9NP77 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
SSU72Q9NP77 RNU6-1053P-201ENST00000515930 101 ntBASIC1.11□□□□□ -2.23
SSU72Q9NP77 RNU5B-6P-201ENST00000516765 68 ntBASIC1.11□□□□□ -2.23
SSU72Q9NP77 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.11□□□□□ -2.23
SSU72Q9NP77 RNU6-982P-201ENST00000516216 102 ntBASIC1.1□□□□□ -2.23
SSU72Q9NP77 MIR4421-201ENST00000578133 69 ntBASIC1.1□□□□□ -2.23
SSU72Q9NP77 MIR4303-201ENST00000581299 66 ntBASIC1.1□□□□□ -2.23
SSU72Q9NP77 MIR3657-201ENST00000584818 117 ntBASIC1.1□□□□□ -2.23
SSU72Q9NP77 MIR7107-201ENST00000611489 80 ntBASIC1.1□□□□□ -2.23
SSU72Q9NP77 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SSU72Q9NP77 RNU6-990P-201ENST00000364385 104 ntBASIC1.09□□□□□ -2.23
SSU72Q9NP77 RNY1P8-201ENST00000383970 114 ntBASIC1.09□□□□□ -2.23
SSU72Q9NP77 RNU6-260P-201ENST00000384092 107 ntBASIC1.09□□□□□ -2.23
SSU72Q9NP77 RNA5SP268-201ENST00000516828 124 ntBASIC1.09□□□□□ -2.23
SSU72Q9NP77 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.09□□□□□ -2.23
SSU72Q9NP77 AC005520.4-201ENST00000604337 90 ntBASIC1.09□□□□□ -2.23
SSU72Q9NP77 RNA5SP227-201ENST00000516184 113 ntBASIC1.08□□□□□ -2.24
SSU72Q9NP77 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.08□□□□□ -2.24
SSU72Q9NP77 RNU6-895P-201ENST00000384125 103 ntBASIC1.07□□□□□ -2.24
SSU72Q9NP77 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
SSU72Q9NP77 RNU4-62P-201ENST00000410125 130 ntBASIC1.07□□□□□ -2.24
SSU72Q9NP77 RNA5SP222-201ENST00000411039 105 ntBASIC1.07□□□□□ -2.24
SSU72Q9NP77 Y_RNA.676-201ENST00000516393 96 ntBASIC1.07□□□□□ -2.24
SSU72Q9NP77 AC069503.3-201ENST00000618674 145 ntBASIC1.07□□□□□ -2.24
SSU72Q9NP77 RNU6-1216P-201ENST00000362590 107 ntBASIC1.06□□□□□ -2.24
SSU72Q9NP77 RNU4-45P-201ENST00000365469 141 ntBASIC1.06□□□□□ -2.24
SSU72Q9NP77 SNORA17.3-201ENST00000391159 129 ntBASIC1.06□□□□□ -2.24
SSU72Q9NP77 AP1B1P2-201ENST00000416196 106 ntBASIC1.06□□□□□ -2.24
SSU72Q9NP77 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
SSU72Q9NP77 RNU6-630P-201ENST00000391258 106 ntBASIC1.05□□□□□ -2.24
SSU72Q9NP77 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
SSU72Q9NP77 Y_RNA.340-201ENST00000365330 92 ntBASIC1.04□□□□□ -2.24
SSU72Q9NP77 Y_RNA.443-201ENST00000384135 111 ntBASIC1.04□□□□□ -2.24
SSU72Q9NP77 RNU7-95P-201ENST00000459222 64 ntBASIC1.04□□□□□ -2.24
SSU72Q9NP77 RNU1-29P-201ENST00000606574 126 ntBASIC1.04□□□□□ -2.24
SSU72Q9NP77 AL109933.3-201ENST00000619095 188 ntBASIC1.04□□□□□ -2.24
SSU72Q9NP77 AC073869.9-201ENST00000641610 120 ntBASIC1.04□□□□□ -2.24
SSU72Q9NP77 RNA5SP517-201ENST00000364724 117 ntBASIC1.02□□□□□ -2.25
SSU72Q9NP77 RNU6-471P-201ENST00000383944 106 ntBASIC1.02□□□□□ -2.25
SSU72Q9NP77 AC125388.1-201ENST00000459631 156 ntBASIC1.02□□□□□ -2.25
SSU72Q9NP77 TRMT112P2-201ENST00000512910 132 ntBASIC1.02□□□□□ -2.25
SSU72Q9NP77 MIR4752-201ENST00000579672 72 ntBASIC1.02□□□□□ -2.25
SSU72Q9NP77 MIR548AE1-201ENST00000583292 70 ntBASIC1.02□□□□□ -2.25
SSU72Q9NP77 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms