Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 MIR96-201ENST00000362288 78 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 SNORA80D-201ENST00000384488 135 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 RNU6-977P-201ENST00000516411 103 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 SNORA70.22-201ENST00000517160 124 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 MIR548O2-201ENST00000616090 70 ntBASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
RC3H2Q9HBD1 RNU6-54P-201ENST00000365563 107 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 MIR203A-201ENST00000384836 110 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 MIR222-201ENST00000384992 110 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 RNU1-119P-201ENST00000391122 165 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 MIR6509-201ENST00000614603 85 ntBASIC1.49□□□□□ -2.17
RC3H2Q9HBD1 SNORD114-22-201ENST00000365423 72 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 MIR617-201ENST00000385030 97 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 MIR519E-201ENST00000385075 84 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 MIR100-201ENST00000385259 80 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 RNU6-994P-201ENST00000410507 111 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 RNU7-104P-201ENST00000459398 79 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 SNORD79.1-201ENST00000516069 84 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 AC073869.9-201ENST00000641610 120 ntBASIC1.48□□□□□ -2.17
RC3H2Q9HBD1 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 SNORA40.17-201ENST00000517256 115 ntBASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 RMST_2.1-201ENST00000617263 136 ntBASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
RC3H2Q9HBD1 Y_RNA.174-201ENST00000363781 105 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 Y_RNA.375-201ENST00000365625 101 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 MIR520F-201ENST00000384824 87 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 RNU6-141P-201ENST00000410499 105 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 SNORD42B-201ENST00000458893 67 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 RNU7-90P-201ENST00000459216 62 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 MIR3657-201ENST00000584818 117 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 MIR6078-201ENST00000611069 100 ntBASIC1.46□□□□□ -2.18
RC3H2Q9HBD1 RNU6-668P-201ENST00000364180 107 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 MIR216B-201ENST00000390186 82 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 MIR1827-201ENST00000408549 66 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 MTND4LP1-201ENST00000446263 157 ntBASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RC3H2Q9HBD1 RNU1-93P-201ENST00000364704 169 ntBASIC1.44□□□□□ -2.18
RC3H2Q9HBD1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.44□□□□□ -2.18
RC3H2Q9HBD1 AC092634.7-201ENST00000621022 103 ntBASIC1.44□□□□□ -2.18
RC3H2Q9HBD1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 MIR1-1-201ENST00000362147 71 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 RNU6-829P-201ENST00000363700 112 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 RNU6-645P-201ENST00000364649 106 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 AC067940.1-201ENST00000458411 300 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 AL136317.1-201ENST00000612653 226 ntBASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RC3H2Q9HBD1 RNU6V-201ENST00000384105 107 ntBASIC1.42□□□□□ -2.18
RC3H2Q9HBD1 RNU6-542P-201ENST00000516405 103 ntBASIC1.42□□□□□ -2.18
RC3H2Q9HBD1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RC3H2Q9HBD1 RNA5SP327-201ENST00000362494 101 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 RNU6-614P-201ENST00000384369 107 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 MIR644A-201ENST00000385262 94 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 SNORD12-201ENST00000391002 90 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 U6.59-201ENST00000615686 107 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 MIR6767-201ENST00000637302 66 ntBASIC1.41□□□□□ -2.18
RC3H2Q9HBD1 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
RC3H2Q9HBD1 AC067863.3-201ENST00000624172 122 ntBASIC1.4□□□□□ -2.19
RC3H2Q9HBD1 SNORA25.5-201ENST00000363782 126 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 RNU6-990P-201ENST00000364385 104 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 RNA5SP192-201ENST00000364404 120 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 Y_RNA.236-201ENST00000364427 111 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 RNU6-260P-201ENST00000384092 107 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 SNORD41.1-201ENST00000391000 69 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 AC002350.1-201ENST00000490759 375 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
RC3H2Q9HBD1 RNU6-1079P-201ENST00000362861 110 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 SNORA2.1-201ENST00000363089 137 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 MIR7-2-201ENST00000384970 110 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 SCARNA21.1-201ENST00000515996 128 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 RNU6-656P-201ENST00000516785 107 ntBASIC1.38□□□□□ -2.19
RC3H2Q9HBD1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RC3H2Q9HBD1 AC022709.1-201ENST00000615967 87 ntBASIC1.37□□□□□ -2.19
RC3H2Q9HBD1 AC244669.1-204ENST00000621564 178 ntBASIC1.37□□□□□ -2.19
RC3H2Q9HBD1 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 SNORD28-201ENST00000384706 75 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 MT-TY-201ENST00000387409 66 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 AC002429.1-201ENST00000437672 148 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 RNA5SP147-201ENST00000516493 109 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 MIR4639-201ENST00000584938 69 ntBASIC1.36□□□□□ -2.19
RC3H2Q9HBD1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 RNA5SP299-201ENST00000391203 116 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 MIR466-201ENST00000580653 84 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 MIR6739-201ENST00000622461 75 ntBASIC1.35□□□□□ -2.19
RC3H2Q9HBD1 RNU6-446P-201ENST00000362827 106 ntBASIC1.34□□□□□ -2.19
RC3H2Q9HBD1 SNORD18A-201ENST00000363753 72 ntBASIC1.33□□□□□ -2.2
RC3H2Q9HBD1 RNU6-726P-201ENST00000364680 107 ntBASIC1.33□□□□□ -2.2
RC3H2Q9HBD1 RNU6-42P-201ENST00000384165 107 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms