Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MIR4499-201ENST00000584834 69 ntBASIC-1.11□□□□□ -2.59
SLIRPQ9GZT3 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.12□□□□□ -2.59
SLIRPQ9GZT3 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.12□□□□□ -2.59
SLIRPQ9GZT3 RNU6-65P-201ENST00000516332 98 ntBASIC-1.12□□□□□ -2.59
SLIRPQ9GZT3 MIR4536-1-201ENST00000583537 88 ntBASIC-1.12□□□□□ -2.59
SLIRPQ9GZT3 MIR6773-201ENST00000612812 74 ntBASIC-1.12□□□□□ -2.59
SLIRPQ9GZT3 uc_338.19-201ENST00000616808 99 ntBASIC-1.12□□□□□ -2.59
SLIRPQ9GZT3 AC025521.1-201ENST00000621624 286 ntBASIC-1.12□□□□□ -2.59
SLIRPQ9GZT3 SNORD50.2-201ENST00000365465 70 ntBASIC-1.13□□□□□ -2.59
SLIRPQ9GZT3 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.13□□□□□ -2.59
SLIRPQ9GZT3 AC022137.1-201ENST00000483735 151 ntBASIC-1.13□□□□□ -2.59
SLIRPQ9GZT3 RNU6-138P-201ENST00000515952 107 ntBASIC-1.13□□□□□ -2.59
SLIRPQ9GZT3 RNU6-327P-201ENST00000516270 127 ntBASIC-1.13□□□□□ -2.59
SLIRPQ9GZT3 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.14□□□□□ -2.59
SLIRPQ9GZT3 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.14□□□□□ -2.59
SLIRPQ9GZT3 RNU6-592P-201ENST00000411333 103 ntBASIC-1.14□□□□□ -2.59
SLIRPQ9GZT3 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.14□□□□□ -2.59
SLIRPQ9GZT3 RNU6-719P-201ENST00000516671 104 ntBASIC-1.14□□□□□ -2.59
SLIRPQ9GZT3 MIR4503-201ENST00000582187 83 ntBASIC-1.14□□□□□ -2.59
SLIRPQ9GZT3 U7.2-201ENST00000607576 63 ntBASIC-1.14□□□□□ -2.59
SLIRPQ9GZT3 MIR8068-201ENST00000618032 68 ntBASIC-1.14□□□□□ -2.59
SLIRPQ9GZT3 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.15□□□□□ -2.59
SLIRPQ9GZT3 RNU6-431P-201ENST00000383874 107 ntBASIC-1.15□□□□□ -2.59
SLIRPQ9GZT3 RNU6-35P-201ENST00000384530 107 ntBASIC-1.15□□□□□ -2.59
SLIRPQ9GZT3 MIR577-201ENST00000385196 96 ntBASIC-1.15□□□□□ -2.59
SLIRPQ9GZT3 AP000533.3-201ENST00000447704 118 ntBASIC-1.15□□□□□ -2.59
SLIRPQ9GZT3 FGF7P7-201ENST00000514120 227 ntBASIC-1.15□□□□□ -2.59
SLIRPQ9GZT3 snoR1.1-201ENST00000628177 80 ntBASIC-1.15□□□□□ -2.59
SLIRPQ9GZT3 SNORD115-23-201ENST00000364461 82 ntBASIC-1.16□□□□□ -2.6
SLIRPQ9GZT3 SNORA63.6-201ENST00000364921 119 ntBASIC-1.16□□□□□ -2.6
SLIRPQ9GZT3 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.16□□□□□ -2.6
SLIRPQ9GZT3 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.16□□□□□ -2.6
SLIRPQ9GZT3 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.16□□□□□ -2.6
SLIRPQ9GZT3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.16□□□□□ -2.6
SLIRPQ9GZT3 MIR548X2-201ENST00000579776 100 ntBASIC-1.16□□□□□ -2.6
SLIRPQ9GZT3 AC025166.1-201ENST00000612411 163 ntBASIC-1.16□□□□□ -2.6
SLIRPQ9GZT3 SNORD114-15-201ENST00000364687 72 ntBASIC-1.17□□□□□ -2.6
SLIRPQ9GZT3 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.17□□□□□ -2.6
SLIRPQ9GZT3 MIRLET7B-201ENST00000385140 83 ntBASIC-1.17□□□□□ -2.6
SLIRPQ9GZT3 SNORD64-201ENST00000386683 67 ntBASIC-1.17□□□□□ -2.6
SLIRPQ9GZT3 RNU7-85P-201ENST00000458851 63 ntBASIC-1.17□□□□□ -2.6
SLIRPQ9GZT3 MIR4694-201ENST00000578534 80 ntBASIC-1.17□□□□□ -2.6
SLIRPQ9GZT3 RNU6-495P-201ENST00000362995 107 ntBASIC-1.18□□□□□ -2.6
SLIRPQ9GZT3 RNU6-337P-201ENST00000391243 106 ntBASIC-1.18□□□□□ -2.6
SLIRPQ9GZT3 RNU6-274P-201ENST00000459566 107 ntBASIC-1.18□□□□□ -2.6
SLIRPQ9GZT3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.18□□□□□ -2.6
SLIRPQ9GZT3 SNORA63.2-201ENST00000362603 126 ntBASIC-1.19□□□□□ -2.6
SLIRPQ9GZT3 SNORD58C-201ENST00000365223 64 ntBASIC-1.19□□□□□ -2.6
SLIRPQ9GZT3 SNORD116-18-201ENST00000383961 92 ntBASIC-1.19□□□□□ -2.6
SLIRPQ9GZT3 RNU6-196P-201ENST00000384315 107 ntBASIC-1.19□□□□□ -2.6
SLIRPQ9GZT3 MIR147A-201ENST00000385079 72 ntBASIC-1.19□□□□□ -2.6
SLIRPQ9GZT3 AC140658.3-201ENST00000567603 271 ntBASIC-1.19□□□□□ -2.6
SLIRPQ9GZT3 AL513043.2-201ENST00000573941 143 ntBASIC-1.19□□□□□ -2.6
SLIRPQ9GZT3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.19□□□□□ -2.6
SLIRPQ9GZT3 MIR382-201ENST00000637119 76 ntBASIC-1.19□□□□□ -2.6
SLIRPQ9GZT3 RNU6-832P-201ENST00000363319 107 ntBASIC-1.2□□□□□ -2.6
SLIRPQ9GZT3 RNU6-200P-201ENST00000364743 107 ntBASIC-1.2□□□□□ -2.6
SLIRPQ9GZT3 RNU6-132P-201ENST00000383863 107 ntBASIC-1.2□□□□□ -2.6
SLIRPQ9GZT3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.2□□□□□ -2.6
SLIRPQ9GZT3 RNU6-394P-201ENST00000410735 107 ntBASIC-1.2□□□□□ -2.6
SLIRPQ9GZT3 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.2□□□□□ -2.6
SLIRPQ9GZT3 MIR378F-201ENST00000578143 78 ntBASIC-1.2□□□□□ -2.6
SLIRPQ9GZT3 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.21□□□□□ -2.6
SLIRPQ9GZT3 RNU6-905P-201ENST00000384434 107 ntBASIC-1.21□□□□□ -2.6
SLIRPQ9GZT3 MIR548U-201ENST00000390728 81 ntBASIC-1.21□□□□□ -2.6
SLIRPQ9GZT3 MTND3P2-201ENST00000438452 342 ntBASIC-1.21□□□□□ -2.6
SLIRPQ9GZT3 RNA5SP470-201ENST00000516463 106 ntBASIC-1.21□□□□□ -2.6
SLIRPQ9GZT3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.21□□□□□ -2.6
SLIRPQ9GZT3 MIR4439-201ENST00000583746 80 ntBASIC-1.21□□□□□ -2.6
SLIRPQ9GZT3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
SLIRPQ9GZT3 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.22□□□□□ -2.6
SLIRPQ9GZT3 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.23□□□□□ -2.61
SLIRPQ9GZT3 RNY3P2-201ENST00000362918 102 ntBASIC-1.23□□□□□ -2.61
SLIRPQ9GZT3 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.23□□□□□ -2.61
SLIRPQ9GZT3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.23□□□□□ -2.61
SLIRPQ9GZT3 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.23□□□□□ -2.61
SLIRPQ9GZT3 MIR4679-2-201ENST00000578358 77 ntBASIC-1.23□□□□□ -2.61
SLIRPQ9GZT3 MIR3064-201ENST00000581130 66 ntBASIC-1.23□□□□□ -2.61
SLIRPQ9GZT3 MIR3140-201ENST00000583685 90 ntBASIC-1.23□□□□□ -2.61
SLIRPQ9GZT3 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 SNORA24B-201ENST00000384176 131 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 MIR569-201ENST00000385228 96 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 RNA5SP395-201ENST00000516567 118 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 AC068339.1-201ENST00000526965 141 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.24□□□□□ -2.61
SLIRPQ9GZT3 RNU6-574P-201ENST00000384265 107 ntBASIC-1.25□□□□□ -2.61
SLIRPQ9GZT3 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.25□□□□□ -2.61
SLIRPQ9GZT3 RNU6-644P-201ENST00000391155 98 ntBASIC-1.25□□□□□ -2.61
SLIRPQ9GZT3 MIR548AX-201ENST00000580117 73 ntBASIC-1.25□□□□□ -2.61
SLIRPQ9GZT3 SNORD75.2-201ENST00000408784 58 ntBASIC-1.26□□□□□ -2.61
SLIRPQ9GZT3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.26□□□□□ -2.61
SLIRPQ9GZT3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.26□□□□□ -2.61
SLIRPQ9GZT3 AC104996.3-201ENST00000590718 94 ntBASIC-1.26□□□□□ -2.61
SLIRPQ9GZT3 RNU6-990P-201ENST00000364385 104 ntBASIC-1.27□□□□□ -2.61
SLIRPQ9GZT3 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.27□□□□□ -2.61
SLIRPQ9GZT3 AC021146.9-201ENST00000512503 156 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 272.4 ms