Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 Y_RNA.783-201ENST00000613546 102 ntBASIC1.73□□□□□ -2.13
USB1Q9BQ65 RNU5B-6P-201ENST00000516765 68 ntBASIC1.72□□□□□ -2.13
USB1Q9BQ65 RNU1-92P-201ENST00000517017 135 ntBASIC1.72□□□□□ -2.13
USB1Q9BQ65 Y_RNA.250-201ENST00000364542 110 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 RNU6-269P-201ENST00000391077 97 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 MIR4524B-201ENST00000581569 115 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 MIR3124-201ENST00000582636 67 ntBASIC1.71□□□□□ -2.14
USB1Q9BQ65 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
USB1Q9BQ65 SNORA8.2-201ENST00000384372 139 ntBASIC1.7□□□□□ -2.14
USB1Q9BQ65 RNU6-1162P-201ENST00000384443 104 ntBASIC1.7□□□□□ -2.14
USB1Q9BQ65 RNU6-237P-201ENST00000515985 71 ntBASIC1.7□□□□□ -2.14
USB1Q9BQ65 MIR3612-201ENST00000579753 87 ntBASIC1.7□□□□□ -2.14
USB1Q9BQ65 Y_RNA.236-201ENST00000364427 111 ntBASIC1.69□□□□□ -2.14
USB1Q9BQ65 RNU6-548P-201ENST00000517083 115 ntBASIC1.69□□□□□ -2.14
USB1Q9BQ65 RNU6-302P-201ENST00000365249 107 ntBASIC1.68□□□□□ -2.14
USB1Q9BQ65 MIR573-201ENST00000384964 99 ntBASIC1.68□□□□□ -2.14
USB1Q9BQ65 SCARNA16.5-201ENST00000517114 183 ntBASIC1.68□□□□□ -2.14
USB1Q9BQ65 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.68□□□□□ -2.14
USB1Q9BQ65 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USB1Q9BQ65 RNA5SP432-201ENST00000362480 116 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 RNU6-482P-201ENST00000391068 107 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 MIR1289-2-201ENST00000408360 111 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 AL591806.2-201ENST00000433122 173 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 RNA5SP484-201ENST00000458857 111 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 AC015712.3-201ENST00000559380 164 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 MIR548V-201ENST00000584165 80 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.67□□□□□ -2.14
USB1Q9BQ65 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USB1Q9BQ65 MIR548C-201ENST00000384815 97 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 MIR521-2-201ENST00000384818 87 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 MIR19B1-201ENST00000384829 87 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 RNU6-92P-201ENST00000605893 104 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.66□□□□□ -2.14
USB1Q9BQ65 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USB1Q9BQ65 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
USB1Q9BQ65 AL157398.1-201ENST00000452981 186 ntBASIC1.65□□□□□ -2.15
USB1Q9BQ65 snoU13.13-201ENST00000458842 104 ntBASIC1.65□□□□□ -2.15
USB1Q9BQ65 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
USB1Q9BQ65 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USB1Q9BQ65 MIR200A-201ENST00000384875 90 ntBASIC1.64□□□□□ -2.15
USB1Q9BQ65 SNORD124-201ENST00000459577 104 ntBASIC1.64□□□□□ -2.15
USB1Q9BQ65 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
USB1Q9BQ65 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.64□□□□□ -2.15
USB1Q9BQ65 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
USB1Q9BQ65 RNU6-122P-201ENST00000516818 107 ntBASIC1.63□□□□□ -2.15
USB1Q9BQ65 AC025627.3-201ENST00000582078 182 ntBASIC1.63□□□□□ -2.15
USB1Q9BQ65 AL162376.1-201ENST00000624117 175 ntBASIC1.63□□□□□ -2.15
USB1Q9BQ65 MIR6845-201ENST00000613182 61 ntBASIC1.62□□□□□ -2.15
USB1Q9BQ65 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
USB1Q9BQ65 AC021146.9-201ENST00000512503 156 ntBASIC1.61□□□□□ -2.15
USB1Q9BQ65 MIR630-201ENST00000384957 97 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 AC003989.2-201ENST00000440224 169 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 MIR3938-201ENST00000582157 103 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 MIR6828-201ENST00000636181 60 ntBASIC1.6□□□□□ -2.15
USB1Q9BQ65 RNU6-446P-201ENST00000362827 106 ntBASIC1.59□□□□□ -2.15
USB1Q9BQ65 SNORA75.1-201ENST00000391130 148 ntBASIC1.59□□□□□ -2.15
USB1Q9BQ65 RNA5SP227-201ENST00000516184 113 ntBASIC1.59□□□□□ -2.15
USB1Q9BQ65 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
USB1Q9BQ65 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
USB1Q9BQ65 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
USB1Q9BQ65 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 MIR758-201ENST00000390227 88 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 SNORA67.5-201ENST00000391036 107 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 SNORA25.15-201ENST00000516487 89 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 MIR4769-201ENST00000584126 77 ntBASIC1.58□□□□□ -2.16
USB1Q9BQ65 SNORD60.1-201ENST00000362451 73 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 Y_RNA.407-201ENST00000383986 113 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 SNORA15B-2-201ENST00000384058 135 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 SNORA15B-1-201ENST00000384334 135 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 SCARNA17.3-201ENST00000516381 125 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.57□□□□□ -2.16
USB1Q9BQ65 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
USB1Q9BQ65 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.57□□□□□ -2.16
USB1Q9BQ65 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
USB1Q9BQ65 MIR652-201ENST00000385278 98 ntBASIC1.56□□□□□ -2.16
USB1Q9BQ65 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.56□□□□□ -2.16
USB1Q9BQ65 MIR517B-201ENST00000385102 67 ntBASIC1.55□□□□□ -2.16
USB1Q9BQ65 Y_RNA.633-201ENST00000459107 95 ntBASIC1.55□□□□□ -2.16
USB1Q9BQ65 uc_338.10-201ENST00000621872 182 ntBASIC1.55□□□□□ -2.16
USB1Q9BQ65 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
USB1Q9BQ65 MIR18A-201ENST00000362310 71 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 SNORD114-24-201ENST00000365029 72 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 MIR9-3-201ENST00000385084 90 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 SNORD113-2-201ENST00000391082 72 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 AC006210.1-201ENST00000424882 111 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 U2.7-201ENST00000619197 100 ntBASIC1.54□□□□□ -2.16
USB1Q9BQ65 RNU6-698P-201ENST00000363523 107 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 RNU6-34P-201ENST00000364874 107 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 SNORA63.6-201ENST00000364921 119 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 SNORA33.1-201ENST00000364957 130 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
USB1Q9BQ65 MIR764-201ENST00000390811 85 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 SNORD110-201ENST00000408189 75 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 RNA5SP255-201ENST00000516370 107 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 RNA5SP268-201ENST00000516828 124 ntBASIC1.53□□□□□ -2.16
USB1Q9BQ65 AC011195.1-201ENST00000578177 177 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms