Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SNORD105-201ENST00000386910 85 ntBASIC1.88□□□□□ -2.11
PHOX2BQ99453 AC005520.4-201ENST00000604337 90 ntBASIC1.88□□□□□ -2.11
PHOX2BQ99453 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.88□□□□□ -2.11
PHOX2BQ99453 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PHOX2BQ99453 MIR96-201ENST00000362288 78 ntBASIC1.87□□□□□ -2.11
PHOX2BQ99453 SNORD113.1-201ENST00000363280 73 ntBASIC1.87□□□□□ -2.11
PHOX2BQ99453 Y_RNA.258-201ENST00000364613 105 ntBASIC1.87□□□□□ -2.11
PHOX2BQ99453 MIR519E-201ENST00000385075 84 ntBASIC1.87□□□□□ -2.11
PHOX2BQ99453 RNU6-604P-201ENST00000390917 100 ntBASIC1.87□□□□□ -2.11
PHOX2BQ99453 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
PHOX2BQ99453 MIR19B1-201ENST00000384829 87 ntBASIC1.86□□□□□ -2.11
PHOX2BQ99453 SNORD89-201ENST00000390981 114 ntBASIC1.86□□□□□ -2.11
PHOX2BQ99453 SNORD41.1-201ENST00000391000 69 ntBASIC1.86□□□□□ -2.11
PHOX2BQ99453 AC025627.3-201ENST00000582078 182 ntBASIC1.86□□□□□ -2.11
PHOX2BQ99453 SNORA7.1-201ENST00000363750 139 ntBASIC1.85□□□□□ -2.11
PHOX2BQ99453 RNU6-1039P-201ENST00000383931 107 ntBASIC1.85□□□□□ -2.11
PHOX2BQ99453 SNORD28-201ENST00000384706 75 ntBASIC1.85□□□□□ -2.11
PHOX2BQ99453 MIR548L-201ENST00000408303 86 ntBASIC1.85□□□□□ -2.11
PHOX2BQ99453 RNA5SP61-201ENST00000516453 100 ntBASIC1.85□□□□□ -2.11
PHOX2BQ99453 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
PHOX2BQ99453 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
PHOX2BQ99453 MTND4LP1-201ENST00000446263 157 ntBASIC1.84□□□□□ -2.11
PHOX2BQ99453 AC244669.1-204ENST00000621564 178 ntBASIC1.84□□□□□ -2.11
PHOX2BQ99453 AC103706.3-201ENST00000636297 85 ntBASIC1.84□□□□□ -2.11
PHOX2BQ99453 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
PHOX2BQ99453 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
PHOX2BQ99453 MIR644A-201ENST00000385262 94 ntBASIC1.82□□□□□ -2.12
PHOX2BQ99453 MIR6509-201ENST00000614603 85 ntBASIC1.82□□□□□ -2.12
PHOX2BQ99453 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
PHOX2BQ99453 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.8□□□□□ -2.12
PHOX2BQ99453 RNA5SP327-201ENST00000362494 101 ntBASIC1.8□□□□□ -2.12
PHOX2BQ99453 RNA5SP436-201ENST00000516020 115 ntBASIC1.8□□□□□ -2.12
PHOX2BQ99453 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
PHOX2BQ99453 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.79□□□□□ -2.12
PHOX2BQ99453 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PHOX2BQ99453 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
PHOX2BQ99453 SNORD114-4-201ENST00000363962 75 ntBASIC1.78□□□□□ -2.12
PHOX2BQ99453 RPS29P1-201ENST00000465274 159 ntBASIC1.78□□□□□ -2.12
PHOX2BQ99453 MIR502-201ENST00000606349 86 ntBASIC1.78□□□□□ -2.12
PHOX2BQ99453 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
PHOX2BQ99453 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
PHOX2BQ99453 AC073869.9-201ENST00000641610 120 ntBASIC1.78□□□□□ -2.12
PHOX2BQ99453 MIR520E-201ENST00000384867 87 ntBASIC1.77□□□□□ -2.13
PHOX2BQ99453 MIR573-201ENST00000384964 99 ntBASIC1.77□□□□□ -2.13
PHOX2BQ99453 RNA5SP47-201ENST00000517230 109 ntBASIC1.77□□□□□ -2.13
PHOX2BQ99453 MIR4460-201ENST00000577862 86 ntBASIC1.77□□□□□ -2.13
PHOX2BQ99453 SNORD18A-201ENST00000363753 72 ntBASIC1.76□□□□□ -2.13
PHOX2BQ99453 SNORD116-24-201ENST00000384549 92 ntBASIC1.76□□□□□ -2.13
PHOX2BQ99453 MT-TY-201ENST00000387409 66 ntBASIC1.76□□□□□ -2.13
PHOX2BQ99453 NAMPTP3-201ENST00000569273 224 ntBASIC1.76□□□□□ -2.13
PHOX2BQ99453 MIR4511-201ENST00000582784 87 ntBASIC1.76□□□□□ -2.13
PHOX2BQ99453 AC069503.3-201ENST00000618674 145 ntBASIC1.76□□□□□ -2.13
PHOX2BQ99453 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PHOX2BQ99453 RNU6-726P-201ENST00000364680 107 ntBASIC1.75□□□□□ -2.13
PHOX2BQ99453 RNU4-45P-201ENST00000365469 141 ntBASIC1.75□□□□□ -2.13
PHOX2BQ99453 RNU6V-201ENST00000384105 107 ntBASIC1.75□□□□□ -2.13
PHOX2BQ99453 RNU1-92P-201ENST00000517017 135 ntBASIC1.75□□□□□ -2.13
PHOX2BQ99453 SNORD114-24-201ENST00000365029 72 ntBASIC1.74□□□□□ -2.13
PHOX2BQ99453 RNU6-1223P-201ENST00000517124 104 ntBASIC1.74□□□□□ -2.13
PHOX2BQ99453 MIR4255-201ENST00000579351 72 ntBASIC1.74□□□□□ -2.13
PHOX2BQ99453 RNU6-668P-201ENST00000364180 107 ntBASIC1.73□□□□□ -2.13
PHOX2BQ99453 RNU1-93P-201ENST00000364704 169 ntBASIC1.73□□□□□ -2.13
PHOX2BQ99453 RNU6-54P-201ENST00000365563 107 ntBASIC1.73□□□□□ -2.13
PHOX2BQ99453 RNU6-260P-201ENST00000384092 107 ntBASIC1.73□□□□□ -2.13
PHOX2BQ99453 SNORD26-201ENST00000384147 75 ntBASIC1.73□□□□□ -2.13
PHOX2BQ99453 SNORA8.2-201ENST00000384372 139 ntBASIC1.73□□□□□ -2.13
PHOX2BQ99453 SCARNA16.5-201ENST00000517114 183 ntBASIC1.73□□□□□ -2.13
PHOX2BQ99453 MIR3678-201ENST00000578455 94 ntBASIC1.73□□□□□ -2.13
PHOX2BQ99453 MIR3612-201ENST00000579753 87 ntBASIC1.73□□□□□ -2.13
PHOX2BQ99453 Y_RNA.68-201ENST00000362881 102 ntBASIC1.72□□□□□ -2.13
PHOX2BQ99453 MIR4421-201ENST00000578133 69 ntBASIC1.72□□□□□ -2.13
PHOX2BQ99453 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
PHOX2BQ99453 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PHOX2BQ99453 RNU1-141P-201ENST00000364623 158 ntBASIC1.71□□□□□ -2.14
PHOX2BQ99453 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.71□□□□□ -2.14
PHOX2BQ99453 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
PHOX2BQ99453 SNORA2.1-201ENST00000363089 137 ntBASIC1.7□□□□□ -2.14
PHOX2BQ99453 SNORA25.8-201ENST00000364831 128 ntBASIC1.7□□□□□ -2.14
PHOX2BQ99453 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.7□□□□□ -2.14
PHOX2BQ99453 RNA5SP476-201ENST00000516613 103 ntBASIC1.7□□□□□ -2.14
PHOX2BQ99453 MIR3657-201ENST00000584818 117 ntBASIC1.7□□□□□ -2.14
PHOX2BQ99453 Y_RNA.250-201ENST00000364542 110 ntBASIC1.69□□□□□ -2.14
PHOX2BQ99453 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PHOX2BQ99453 RPS29P23-201ENST00000458635 123 ntBASIC1.69□□□□□ -2.14
PHOX2BQ99453 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.69□□□□□ -2.14
PHOX2BQ99453 SNORD53B-201ENST00000577887 78 ntBASIC1.69□□□□□ -2.14
PHOX2BQ99453 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PHOX2BQ99453 SNORD114-27-201ENST00000363766 70 ntBASIC1.68□□□□□ -2.14
PHOX2BQ99453 RNU1-124P-201ENST00000363861 145 ntBASIC1.68□□□□□ -2.14
PHOX2BQ99453 SNORA16.1-201ENST00000364597 132 ntBASIC1.68□□□□□ -2.14
PHOX2BQ99453 MIR618-201ENST00000385287 98 ntBASIC1.68□□□□□ -2.14
PHOX2BQ99453 MIR548J-201ENST00000408833 112 ntBASIC1.67□□□□□ -2.14
PHOX2BQ99453 RNU6-542P-201ENST00000516405 103 ntBASIC1.67□□□□□ -2.14
PHOX2BQ99453 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
PHOX2BQ99453 MIR151B-201ENST00000584249 96 ntBASIC1.67□□□□□ -2.14
PHOX2BQ99453 MIR6788-201ENST00000618842 66 ntBASIC1.67□□□□□ -2.14
PHOX2BQ99453 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
PHOX2BQ99453 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
PHOX2BQ99453 RNU6-716P-201ENST00000365621 103 ntBASIC1.66□□□□□ -2.14
PHOX2BQ99453 Y_RNA.433-201ENST00000384089 102 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms