Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 RNU6-633P-201ENST00000362612 103 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 Y_RNA.73-201ENST00000362910 113 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 SNORD118-201ENST00000363593 134 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 RNY1P1-201ENST00000364372 112 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 Y_RNA.558-201ENST00000384685 113 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 MIR519C-201ENST00000385053 87 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 MIR519E-201ENST00000385075 84 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 Y_RNA.611-201ENST00000410682 108 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 AC243829.6-201ENST00000612652 106 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 IGLL4P-201ENST00000614590 133 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.39□□□□□ -2.35
FOXN4Q96NZ1 RNU6-509P-201ENST00000363519 107 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 MIR617-201ENST00000385030 97 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 MIR451A-201ENST00000385059 72 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 MIR518A1-201ENST00000385068 85 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 SNORD90-201ENST00000391145 111 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 MIR1236-201ENST00000408340 102 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 RNU6-935P-201ENST00000410371 100 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 SNORD71-201ENST00000411292 86 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 FGF7P7-201ENST00000514120 227 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 RNU6-1057P-201ENST00000517162 102 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 MIR924-201ENST00000638017 53 ntBASIC0.38□□□□□ -2.35
FOXN4Q96NZ1 SNORD73B-201ENST00000364394 72 ntBASIC0.37□□□□□ -2.35
FOXN4Q96NZ1 RNU6-675P-201ENST00000384236 104 ntBASIC0.37□□□□□ -2.35
FOXN4Q96NZ1 RNA5SP484-201ENST00000458857 111 ntBASIC0.37□□□□□ -2.35
FOXN4Q96NZ1 MIR4796-201ENST00000580742 81 ntBASIC0.37□□□□□ -2.35
FOXN4Q96NZ1 MIR3140-201ENST00000583685 90 ntBASIC0.37□□□□□ -2.35
FOXN4Q96NZ1 AL162376.1-201ENST00000624117 175 ntBASIC0.37□□□□□ -2.35
FOXN4Q96NZ1 MIR548BB-201ENST00000626714 66 ntBASIC0.37□□□□□ -2.35
FOXN4Q96NZ1 MIR4679-1-201ENST00000637619 75 ntBASIC0.37□□□□□ -2.35
FOXN4Q96NZ1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.36□□□□□ -2.35
FOXN4Q96NZ1 MIR450A2-201ENST00000385022 100 ntBASIC0.36□□□□□ -2.35
FOXN4Q96NZ1 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
FOXN4Q96NZ1 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
FOXN4Q96NZ1 NAMPTP3-201ENST00000569273 224 ntBASIC0.36□□□□□ -2.35
FOXN4Q96NZ1 SNORA70.25-201ENST00000612741 95 ntBASIC0.36□□□□□ -2.35
FOXN4Q96NZ1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
FOXN4Q96NZ1 RNU7-74P-201ENST00000459104 62 ntBASIC0.35□□□□□ -2.35
FOXN4Q96NZ1 AC062037.1-201ENST00000605302 128 ntBASIC0.35□□□□□ -2.35
FOXN4Q96NZ1 SNORD115-37-201ENST00000363768 82 ntBASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 RNU1-141P-201ENST00000364623 158 ntBASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 RNU6-497P-201ENST00000365316 104 ntBASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 RNU6-1051P-201ENST00000365471 102 ntBASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 RNU2-59P-201ENST00000410482 191 ntBASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 AC022137.1-201ENST00000483735 151 ntBASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 RNA5SP330-201ENST00000517096 96 ntBASIC0.34□□□□□ -2.36
FOXN4Q96NZ1 MIR103A1-201ENST00000362165 78 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 AC006210.1-201ENST00000424882 111 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 AC093423.1-201ENST00000440817 142 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 AC093729.1-201ENST00000513074 128 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 SNORA25.13-201ENST00000516395 103 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 RNU5B-6P-201ENST00000516765 68 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 MIR4460-201ENST00000577862 86 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 RNU1-29P-201ENST00000606574 126 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 MIR6755-201ENST00000619993 66 ntBASIC0.33□□□□□ -2.36
FOXN4Q96NZ1 SNORA63.2-201ENST00000362603 126 ntBASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 SNORD110-201ENST00000408189 75 ntBASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 snoU13.17-201ENST00000458802 104 ntBASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 MIR5588-201ENST00000581890 63 ntBASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 MIR8087-201ENST00000612745 78 ntBASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 AC006160.2-201ENST00000637708 154 ntBASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 AC073869.9-201ENST00000641610 120 ntBASIC0.32□□□□□ -2.36
FOXN4Q96NZ1 MIR330-201ENST00000362196 94 ntBASIC0.31□□□□□ -2.36
FOXN4Q96NZ1 RNY4P3-201ENST00000365254 95 ntBASIC0.31□□□□□ -2.36
FOXN4Q96NZ1 Y_RNA.388-201ENST00000383919 113 ntBASIC0.31□□□□□ -2.36
FOXN4Q96NZ1 RNU6V-201ENST00000384105 107 ntBASIC0.31□□□□□ -2.36
FOXN4Q96NZ1 SNORA26.2-201ENST00000390922 122 ntBASIC0.31□□□□□ -2.36
FOXN4Q96NZ1 YWHAEP2-201ENST00000580066 112 ntBASIC0.31□□□□□ -2.36
FOXN4Q96NZ1 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 RNA5SP457-201ENST00000363657 124 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 SNORA2A-201ENST00000383885 135 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 RNU6-979P-201ENST00000383896 107 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 RNU6-820P-201ENST00000384273 107 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 MT-TY-201ENST00000387409 66 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 U3.27-201ENST00000391237 200 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 MIR1197-201ENST00000408818 88 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 RNY4P29-201ENST00000410801 97 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 RNU6-592P-201ENST00000411333 103 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 RNU7-129P-201ENST00000516128 62 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 AC140658.3-201ENST00000567603 271 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 MIR4473-201ENST00000583731 91 ntBASIC0.3□□□□□ -2.36
FOXN4Q96NZ1 RNU5F-1-201ENST00000362507 117 ntBASIC0.29□□□□□ -2.36
FOXN4Q96NZ1 RNU6-54P-201ENST00000365563 107 ntBASIC0.29□□□□□ -2.36
FOXN4Q96NZ1 MIR760-201ENST00000390220 80 ntBASIC0.29□□□□□ -2.36
FOXN4Q96NZ1 AL450471.1-201ENST00000447509 127 ntBASIC0.29□□□□□ -2.36
FOXN4Q96NZ1 RNU6-1108P-201ENST00000516308 104 ntBASIC0.29□□□□□ -2.36
FOXN4Q96NZ1 MIR548O2-201ENST00000616090 70 ntBASIC0.29□□□□□ -2.36
FOXN4Q96NZ1 Y_RNA.30-201ENST00000362572 97 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms