Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SNORD78.1-201ENST00000390866 65 ntBASIC1.02□□□□□ -2.25
CHAMP1Q96JM3 RNU6-469P-201ENST00000516253 101 ntBASIC1.02□□□□□ -2.25
CHAMP1Q96JM3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.02□□□□□ -2.25
CHAMP1Q96JM3 MIR330-201ENST00000362196 94 ntBASIC1.01□□□□□ -2.25
CHAMP1Q96JM3 SNORD115-44-201ENST00000365391 82 ntBASIC1.01□□□□□ -2.25
CHAMP1Q96JM3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.01□□□□□ -2.25
CHAMP1Q96JM3 RNU7-104P-201ENST00000459398 79 ntBASIC1.01□□□□□ -2.25
CHAMP1Q96JM3 Y_RNA.313-201ENST00000365095 103 ntBASIC1□□□□□ -2.25
CHAMP1Q96JM3 Y_RNA.316-201ENST00000365118 111 ntBASIC1□□□□□ -2.25
CHAMP1Q96JM3 SNORD41.1-201ENST00000391000 69 ntBASIC1□□□□□ -2.25
CHAMP1Q96JM3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1□□□□□ -2.25
CHAMP1Q96JM3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1□□□□□ -2.25
CHAMP1Q96JM3 RNU7-13P-201ENST00000516413 62 ntBASIC1□□□□□ -2.25
CHAMP1Q96JM3 MIR3202-2-201ENST00000635980 79 ntBASIC1□□□□□ -2.25
CHAMP1Q96JM3 MIR6828-201ENST00000636181 60 ntBASIC1□□□□□ -2.25
CHAMP1Q96JM3 RNU6-726P-201ENST00000364680 107 ntBASIC0.99□□□□□ -2.25
CHAMP1Q96JM3 Y_RNA.437-201ENST00000384113 113 ntBASIC0.99□□□□□ -2.25
CHAMP1Q96JM3 RNU6-1124P-201ENST00000384169 107 ntBASIC0.99□□□□□ -2.25
CHAMP1Q96JM3 MIR608-201ENST00000384820 100 ntBASIC0.99□□□□□ -2.25
CHAMP1Q96JM3 RNU6-1275P-201ENST00000391087 107 ntBASIC0.99□□□□□ -2.25
CHAMP1Q96JM3 RNU6-935P-201ENST00000410371 100 ntBASIC0.99□□□□□ -2.25
CHAMP1Q96JM3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.99□□□□□ -2.25
CHAMP1Q96JM3 AC067863.3-201ENST00000624172 122 ntBASIC0.99□□□□□ -2.25
CHAMP1Q96JM3 SNORA36.1-201ENST00000363424 132 ntBASIC0.98□□□□□ -2.25
CHAMP1Q96JM3 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
CHAMP1Q96JM3 MIR2113-201ENST00000459007 91 ntBASIC0.98□□□□□ -2.25
CHAMP1Q96JM3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
CHAMP1Q96JM3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.98□□□□□ -2.25
CHAMP1Q96JM3 RNU6-1051P-201ENST00000365471 102 ntBASIC0.97□□□□□ -2.25
CHAMP1Q96JM3 RNU6-652P-201ENST00000365488 107 ntBASIC0.97□□□□□ -2.25
CHAMP1Q96JM3 MIR1255A-201ENST00000408338 113 ntBASIC0.97□□□□□ -2.25
CHAMP1Q96JM3 Y_RNA.685-201ENST00000516532 108 ntBASIC0.97□□□□□ -2.25
CHAMP1Q96JM3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.97□□□□□ -2.25
CHAMP1Q96JM3 SNORA63.2-201ENST00000362603 126 ntBASIC0.96□□□□□ -2.26
CHAMP1Q96JM3 RNU6-478P-201ENST00000363904 110 ntBASIC0.96□□□□□ -2.26
CHAMP1Q96JM3 RNU6-1229P-201ENST00000364295 107 ntBASIC0.96□□□□□ -2.26
CHAMP1Q96JM3 MIR1265-201ENST00000408444 86 ntBASIC0.96□□□□□ -2.26
CHAMP1Q96JM3 AL450471.1-201ENST00000447509 127 ntBASIC0.96□□□□□ -2.26
CHAMP1Q96JM3 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
CHAMP1Q96JM3 RNA5SP94-201ENST00000516917 108 ntBASIC0.96□□□□□ -2.26
CHAMP1Q96JM3 RNY1P8-201ENST00000383970 114 ntBASIC0.95□□□□□ -2.26
CHAMP1Q96JM3 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
CHAMP1Q96JM3 MIR617-201ENST00000385030 97 ntBASIC0.95□□□□□ -2.26
CHAMP1Q96JM3 RNA5SP222-201ENST00000411039 105 ntBASIC0.95□□□□□ -2.26
CHAMP1Q96JM3 snoU13.17-201ENST00000458802 104 ntBASIC0.95□□□□□ -2.26
CHAMP1Q96JM3 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
CHAMP1Q96JM3 MIR3140-201ENST00000583685 90 ntBASIC0.95□□□□□ -2.26
CHAMP1Q96JM3 Y_RNA.94-201ENST00000363068 106 ntBASIC0.94□□□□□ -2.26
CHAMP1Q96JM3 SNORA24B-201ENST00000384176 131 ntBASIC0.94□□□□□ -2.26
CHAMP1Q96JM3 MIR451A-201ENST00000385059 72 ntBASIC0.94□□□□□ -2.26
CHAMP1Q96JM3 MIR519E-201ENST00000385075 84 ntBASIC0.94□□□□□ -2.26
CHAMP1Q96JM3 RNA5SP285-201ENST00000516619 119 ntBASIC0.94□□□□□ -2.26
CHAMP1Q96JM3 RNU6-557P-201ENST00000516842 110 ntBASIC0.94□□□□□ -2.26
CHAMP1Q96JM3 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
CHAMP1Q96JM3 MIR146A-201ENST00000385201 99 ntBASIC0.93□□□□□ -2.26
CHAMP1Q96JM3 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
CHAMP1Q96JM3 RNU6-129P-201ENST00000391022 107 ntBASIC0.92□□□□□ -2.26
CHAMP1Q96JM3 AC093423.1-201ENST00000440817 142 ntBASIC0.92□□□□□ -2.26
CHAMP1Q96JM3 U3.27-201ENST00000391237 200 ntBASIC0.91□□□□□ -2.26
CHAMP1Q96JM3 RNA5SP225-201ENST00000410874 135 ntBASIC0.91□□□□□ -2.26
CHAMP1Q96JM3 FGF7P7-201ENST00000514120 227 ntBASIC0.91□□□□□ -2.26
CHAMP1Q96JM3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.91□□□□□ -2.26
CHAMP1Q96JM3 MIR4712-201ENST00000583750 82 ntBASIC0.91□□□□□ -2.26
CHAMP1Q96JM3 RNU6-279P-201ENST00000391297 101 ntBASIC0.9□□□□□ -2.27
CHAMP1Q96JM3 RNU6-1052P-201ENST00000411398 104 ntBASIC0.9□□□□□ -2.27
CHAMP1Q96JM3 RNU6-719P-201ENST00000516671 104 ntBASIC0.9□□□□□ -2.27
CHAMP1Q96JM3 AL162376.1-201ENST00000624117 175 ntBASIC0.9□□□□□ -2.27
CHAMP1Q96JM3 RNU6-315P-201ENST00000362666 107 ntBASIC0.89□□□□□ -2.27
CHAMP1Q96JM3 RNU6-161P-201ENST00000363051 106 ntBASIC0.89□□□□□ -2.27
CHAMP1Q96JM3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.89□□□□□ -2.27
CHAMP1Q96JM3 RNA5SP268-201ENST00000516828 124 ntBASIC0.89□□□□□ -2.27
CHAMP1Q96JM3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.89□□□□□ -2.27
CHAMP1Q96JM3 MIRLET7A1-201ENST00000362295 80 ntBASIC0.88□□□□□ -2.27
CHAMP1Q96JM3 RNU6-269P-201ENST00000391077 97 ntBASIC0.88□□□□□ -2.27
CHAMP1Q96JM3 RNU6-1108P-201ENST00000516308 104 ntBASIC0.88□□□□□ -2.27
CHAMP1Q96JM3 MIR7107-201ENST00000611489 80 ntBASIC0.88□□□□□ -2.27
CHAMP1Q96JM3 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
CHAMP1Q96JM3 RNA5SP517-201ENST00000364724 117 ntBASIC0.87□□□□□ -2.27
CHAMP1Q96JM3 RNY4P3-201ENST00000365254 95 ntBASIC0.87□□□□□ -2.27
CHAMP1Q96JM3 MIR140-201ENST00000385282 100 ntBASIC0.87□□□□□ -2.27
CHAMP1Q96JM3 SNORD77.2-201ENST00000391045 68 ntBASIC0.87□□□□□ -2.27
CHAMP1Q96JM3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.87□□□□□ -2.27
CHAMP1Q96JM3 SNORA36.2-201ENST00000384004 127 ntBASIC0.86□□□□□ -2.27
CHAMP1Q96JM3 SNORA8.2-201ENST00000384372 139 ntBASIC0.86□□□□□ -2.27
CHAMP1Q96JM3 RNU6-110P-201ENST00000384508 104 ntBASIC0.86□□□□□ -2.27
CHAMP1Q96JM3 MIR548L-201ENST00000408303 86 ntBASIC0.86□□□□□ -2.27
CHAMP1Q96JM3 RNU7-74P-201ENST00000459104 62 ntBASIC0.86□□□□□ -2.27
CHAMP1Q96JM3 Y_RNA.660-201ENST00000516002 120 ntBASIC0.86□□□□□ -2.27
CHAMP1Q96JM3 RNA5SP227-201ENST00000516184 113 ntBASIC0.86□□□□□ -2.27
CHAMP1Q96JM3 RNU6-208P-201ENST00000362431 107 ntBASIC0.85□□□□□ -2.27
CHAMP1Q96JM3 RNU6-686P-201ENST00000364839 107 ntBASIC0.85□□□□□ -2.27
CHAMP1Q96JM3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CHAMP1Q96JM3 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
CHAMP1Q96JM3 RNU6-857P-201ENST00000515893 110 ntBASIC0.85□□□□□ -2.27
CHAMP1Q96JM3 MIR548O2-201ENST00000616090 70 ntBASIC0.85□□□□□ -2.27
CHAMP1Q96JM3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CHAMP1Q96JM3 RNA5SP347-201ENST00000362445 119 ntBASIC0.84□□□□□ -2.27
CHAMP1Q96JM3 RNU5F-1-201ENST00000362507 117 ntBASIC0.84□□□□□ -2.27
CHAMP1Q96JM3 MIR508-201ENST00000384857 115 ntBASIC0.84□□□□□ -2.27
CHAMP1Q96JM3 MIR4711-201ENST00000578274 70 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms