Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.28□□□□□ -2.36
CDK5RAP3Q96JB5 MIR216B-201ENST00000390186 82 ntBASIC0.27□□□□□ -2.37
CDK5RAP3Q96JB5 YWHAEP2-201ENST00000580066 112 ntBASIC0.27□□□□□ -2.37
CDK5RAP3Q96JB5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
CDK5RAP3Q96JB5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
CDK5RAP3Q96JB5 MIR598-201ENST00000384868 97 ntBASIC0.26□□□□□ -2.37
CDK5RAP3Q96JB5 MIR501-201ENST00000390204 84 ntBASIC0.26□□□□□ -2.37
CDK5RAP3Q96JB5 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
CDK5RAP3Q96JB5 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
CDK5RAP3Q96JB5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CDK5RAP3Q96JB5 Y_RNA.491-201ENST00000384417 107 ntBASIC0.25□□□□□ -2.37
CDK5RAP3Q96JB5 MT-TY-201ENST00000387409 66 ntBASIC0.25□□□□□ -2.37
CDK5RAP3Q96JB5 RNA5SP292-201ENST00000390974 118 ntBASIC0.25□□□□□ -2.37
CDK5RAP3Q96JB5 HMGN2P22-201ENST00000427588 175 ntBASIC0.25□□□□□ -2.37
CDK5RAP3Q96JB5 FGF7P7-201ENST00000514120 227 ntBASIC0.25□□□□□ -2.37
CDK5RAP3Q96JB5 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
CDK5RAP3Q96JB5 Y_RNA.125-201ENST00000363371 111 ntBASIC0.24□□□□□ -2.37
CDK5RAP3Q96JB5 Y_RNA.355-201ENST00000365462 98 ntBASIC0.24□□□□□ -2.37
CDK5RAP3Q96JB5 RNU6-127P-201ENST00000390897 107 ntBASIC0.24□□□□□ -2.37
CDK5RAP3Q96JB5 RNU6-1052P-201ENST00000411398 104 ntBASIC0.24□□□□□ -2.37
CDK5RAP3Q96JB5 RNU6-719P-201ENST00000516671 104 ntBASIC0.24□□□□□ -2.37
CDK5RAP3Q96JB5 RNU5B-6P-201ENST00000516765 68 ntBASIC0.24□□□□□ -2.37
CDK5RAP3Q96JB5 MIR4473-201ENST00000583731 91 ntBASIC0.24□□□□□ -2.37
CDK5RAP3Q96JB5 SNORD114-23-201ENST00000363536 72 ntBASIC0.23□□□□□ -2.37
CDK5RAP3Q96JB5 MIR488-201ENST00000365739 83 ntBASIC0.23□□□□□ -2.37
CDK5RAP3Q96JB5 U3.27-201ENST00000391237 200 ntBASIC0.23□□□□□ -2.37
CDK5RAP3Q96JB5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.23□□□□□ -2.37
CDK5RAP3Q96JB5 SNORA18.5-201ENST00000516616 101 ntBASIC0.22□□□□□ -2.37
CDK5RAP3Q96JB5 MIR4677-201ENST00000584153 80 ntBASIC0.22□□□□□ -2.37
CDK5RAP3Q96JB5 MIR548AD-201ENST00000584780 82 ntBASIC0.22□□□□□ -2.37
CDK5RAP3Q96JB5 RNY1P4-201ENST00000384595 115 ntBASIC0.21□□□□□ -2.38
CDK5RAP3Q96JB5 MIR643-201ENST00000385267 97 ntBASIC0.21□□□□□ -2.38
CDK5RAP3Q96JB5 SNORA25.13-201ENST00000516395 103 ntBASIC0.21□□□□□ -2.38
CDK5RAP3Q96JB5 MIR548O2-201ENST00000616090 70 ntBASIC0.21□□□□□ -2.38
CDK5RAP3Q96JB5 Y_RNA.220-201ENST00000364244 109 ntBASIC0.2□□□□□ -2.38
CDK5RAP3Q96JB5 RNU6V-201ENST00000384105 107 ntBASIC0.2□□□□□ -2.38
CDK5RAP3Q96JB5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
CDK5RAP3Q96JB5 RNU6-652P-201ENST00000365488 107 ntBASIC0.19□□□□□ -2.38
CDK5RAP3Q96JB5 RNY1P7-201ENST00000384743 110 ntBASIC0.19□□□□□ -2.38
CDK5RAP3Q96JB5 MIR1236-201ENST00000408340 102 ntBASIC0.19□□□□□ -2.38
CDK5RAP3Q96JB5 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.19□□□□□ -2.38
CDK5RAP3Q96JB5 SNORA63.2-201ENST00000362603 126 ntBASIC0.18□□□□□ -2.38
CDK5RAP3Q96JB5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
CDK5RAP3Q96JB5 MIR4668-201ENST00000582284 70 ntBASIC0.18□□□□□ -2.38
CDK5RAP3Q96JB5 MIR3140-201ENST00000583685 90 ntBASIC0.18□□□□□ -2.38
CDK5RAP3Q96JB5 uc_338.10-201ENST00000621872 182 ntBASIC0.18□□□□□ -2.38
CDK5RAP3Q96JB5 RNU6-1051P-201ENST00000365471 102 ntBASIC0.17□□□□□ -2.38
CDK5RAP3Q96JB5 SNORD116-22-201ENST00000384430 92 ntBASIC0.17□□□□□ -2.38
CDK5RAP3Q96JB5 MIR516B1-201ENST00000385211 90 ntBASIC0.17□□□□□ -2.38
CDK5RAP3Q96JB5 MTATP6P29-201ENST00000415057 132 ntBASIC0.17□□□□□ -2.38
CDK5RAP3Q96JB5 RNU6-782P-201ENST00000516852 104 ntBASIC0.17□□□□□ -2.38
CDK5RAP3Q96JB5 MIR924-201ENST00000638017 53 ntBASIC0.17□□□□□ -2.38
CDK5RAP3Q96JB5 RNU6-1131P-201ENST00000364955 107 ntBASIC0.16□□□□□ -2.38
CDK5RAP3Q96JB5 RNY4P3-201ENST00000365254 95 ntBASIC0.16□□□□□ -2.38
CDK5RAP3Q96JB5 Y_RNA.407-201ENST00000383986 113 ntBASIC0.16□□□□□ -2.38
CDK5RAP3Q96JB5 MIR3925-201ENST00000584674 77 ntBASIC0.16□□□□□ -2.38
CDK5RAP3Q96JB5 AC104408.1-201ENST00000605241 170 ntBASIC0.16□□□□□ -2.38
CDK5RAP3Q96JB5 AC084368.1-201ENST00000620935 65 ntBASIC0.16□□□□□ -2.38
CDK5RAP3Q96JB5 RNA5SP214-201ENST00000363378 118 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 SNORA42.1-201ENST00000363515 137 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 RNA5SP325-201ENST00000363756 130 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 MIR610-201ENST00000385139 96 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 SNORD90-201ENST00000391145 111 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 RNY4P30-201ENST00000410216 95 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 MIR4796-201ENST00000580742 81 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 MIR548AE1-201ENST00000583292 70 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 PVT1_3.1-201ENST00000620853 95 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 AC010487.4-201ENST00000637027 61 ntBASIC0.15□□□□□ -2.39
CDK5RAP3Q96JB5 SNORD115-27-201ENST00000364430 82 ntBASIC0.14□□□□□ -2.39
CDK5RAP3Q96JB5 RNU6-54P-201ENST00000365563 107 ntBASIC0.14□□□□□ -2.39
CDK5RAP3Q96JB5 MIR519C-201ENST00000385053 87 ntBASIC0.14□□□□□ -2.39
CDK5RAP3Q96JB5 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
CDK5RAP3Q96JB5 RNU7-153P-201ENST00000516455 62 ntBASIC0.14□□□□□ -2.39
CDK5RAP3Q96JB5 Y_RNA.118-201ENST00000363300 101 ntBASIC0.13□□□□□ -2.39
CDK5RAP3Q96JB5 Y_RNA.437-201ENST00000384113 113 ntBASIC0.13□□□□□ -2.39
CDK5RAP3Q96JB5 Y_RNA.558-201ENST00000384685 113 ntBASIC0.13□□□□□ -2.39
CDK5RAP3Q96JB5 RNU6-402P-201ENST00000410678 103 ntBASIC0.13□□□□□ -2.39
CDK5RAP3Q96JB5 SCARNA11.2-201ENST00000517183 154 ntBASIC0.13□□□□□ -2.39
CDK5RAP3Q96JB5 RNU6-633P-201ENST00000362612 103 ntBASIC0.12□□□□□ -2.39
CDK5RAP3Q96JB5 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
CDK5RAP3Q96JB5 RN7SL793P-201ENST00000583259 296 ntBASIC0.12□□□□□ -2.39
CDK5RAP3Q96JB5 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
CDK5RAP3Q96JB5 RNU6-49P-201ENST00000384256 107 ntBASIC0.11□□□□□ -2.39
CDK5RAP3Q96JB5 RNU6-154P-201ENST00000384306 106 ntBASIC0.11□□□□□ -2.39
CDK5RAP3Q96JB5 MIR593-201ENST00000384856 100 ntBASIC0.11□□□□□ -2.39
CDK5RAP3Q96JB5 SNORA75.1-201ENST00000391130 148 ntBASIC0.11□□□□□ -2.39
CDK5RAP3Q96JB5 Y_RNA.620-201ENST00000411009 88 ntBASIC0.11□□□□□ -2.39
CDK5RAP3Q96JB5 RNU6-844P-201ENST00000517175 102 ntBASIC0.11□□□□□ -2.39
CDK5RAP3Q96JB5 MIR892B-201ENST00000401279 77 ntBASIC0.1□□□□□ -2.39
CDK5RAP3Q96JB5 RNU6-762P-201ENST00000517107 102 ntBASIC0.1□□□□□ -2.39
CDK5RAP3Q96JB5 MIR4514-201ENST00000581410 57 ntBASIC0.1□□□□□ -2.39
CDK5RAP3Q96JB5 RNU5F-1-201ENST00000362507 117 ntBASIC0.09□□□□□ -2.4
CDK5RAP3Q96JB5 SNORD115-37-201ENST00000363768 82 ntBASIC0.09□□□□□ -2.4
CDK5RAP3Q96JB5 RNU6-1134P-201ENST00000365156 101 ntBASIC0.09□□□□□ -2.4
CDK5RAP3Q96JB5 Y_RNA.694-201ENST00000516677 117 ntBASIC0.09□□□□□ -2.4
CDK5RAP3Q96JB5 SNORD114-5-201ENST00000362928 70 ntBASIC0.08□□□□□ -2.4
CDK5RAP3Q96JB5 RNU6-219P-201ENST00000364728 107 ntBASIC0.08□□□□□ -2.4
CDK5RAP3Q96JB5 SNORA24B-201ENST00000384176 131 ntBASIC0.08□□□□□ -2.4
CDK5RAP3Q96JB5 MIR652-201ENST00000385278 98 ntBASIC0.08□□□□□ -2.4
CDK5RAP3Q96JB5 RNU6-1177P-201ENST00000391058 104 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms