Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RNU6-824P-201ENST00000363724 104 ntBASIC1.41□□□□□ -2.18
SHISA4Q96DD7 Y_RNA.174-201ENST00000363781 105 ntBASIC1.41□□□□□ -2.18
SHISA4Q96DD7 AL109933.3-201ENST00000619095 188 ntBASIC1.41□□□□□ -2.18
SHISA4Q96DD7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
SHISA4Q96DD7 SNORA24B-201ENST00000384176 131 ntBASIC1.4□□□□□ -2.19
SHISA4Q96DD7 MIR520F-201ENST00000384824 87 ntBASIC1.4□□□□□ -2.19
SHISA4Q96DD7 MIR451A-201ENST00000385059 72 ntBASIC1.4□□□□□ -2.19
SHISA4Q96DD7 AC097510.1-201ENST00000510945 133 ntBASIC1.4□□□□□ -2.19
SHISA4Q96DD7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SHISA4Q96DD7 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
SHISA4Q96DD7 Y_RNA.443-201ENST00000384135 111 ntBASIC1.39□□□□□ -2.19
SHISA4Q96DD7 Y_RNA.606-201ENST00000410579 103 ntBASIC1.39□□□□□ -2.19
SHISA4Q96DD7 RNU6-1052P-201ENST00000411398 104 ntBASIC1.39□□□□□ -2.19
SHISA4Q96DD7 RNU6-719P-201ENST00000516671 104 ntBASIC1.39□□□□□ -2.19
SHISA4Q96DD7 MIR3675-201ENST00000583661 73 ntBASIC1.39□□□□□ -2.19
SHISA4Q96DD7 SNORD45.1-201ENST00000363181 77 ntBASIC1.38□□□□□ -2.19
SHISA4Q96DD7 MIR216A-201ENST00000385063 110 ntBASIC1.38□□□□□ -2.19
SHISA4Q96DD7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SHISA4Q96DD7 U3.27-201ENST00000391237 200 ntBASIC1.38□□□□□ -2.19
SHISA4Q96DD7 MIR1827-201ENST00000408549 66 ntBASIC1.38□□□□□ -2.19
SHISA4Q96DD7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SHISA4Q96DD7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.38□□□□□ -2.19
SHISA4Q96DD7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SHISA4Q96DD7 MIR373-201ENST00000362273 69 ntBASIC1.37□□□□□ -2.19
SHISA4Q96DD7 MIR633-201ENST00000384821 98 ntBASIC1.37□□□□□ -2.19
SHISA4Q96DD7 RNU6-287P-201ENST00000516230 98 ntBASIC1.37□□□□□ -2.19
SHISA4Q96DD7 RNU7-13P-201ENST00000516413 62 ntBASIC1.37□□□□□ -2.19
SHISA4Q96DD7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SHISA4Q96DD7 SNORD113.1-201ENST00000363280 73 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 SNORA25.4-201ENST00000363666 124 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 AC093423.1-201ENST00000440817 142 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 SNORA31.14-201ENST00000516728 116 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 U6.81-201ENST00000612550 106 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 AL136317.1-201ENST00000612653 226 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 uc_338.16-201ENST00000621804 95 ntBASIC1.36□□□□□ -2.19
SHISA4Q96DD7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.36□□□□□ -2.19
SHISA4Q96DD7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SHISA4Q96DD7 Y_RNA.32-201ENST00000362589 110 ntBASIC1.35□□□□□ -2.19
SHISA4Q96DD7 SNORD115-24-201ENST00000363528 82 ntBASIC1.35□□□□□ -2.19
SHISA4Q96DD7 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
SHISA4Q96DD7 AC110620.1-201ENST00000416042 228 ntBASIC1.35□□□□□ -2.19
SHISA4Q96DD7 RNU6-881P-201ENST00000516813 102 ntBASIC1.35□□□□□ -2.19
SHISA4Q96DD7 RNA5SP457-201ENST00000363657 124 ntBASIC1.34□□□□□ -2.19
SHISA4Q96DD7 AC002429.1-201ENST00000437672 148 ntBASIC1.34□□□□□ -2.19
SHISA4Q96DD7 MIR4511-201ENST00000582784 87 ntBASIC1.34□□□□□ -2.19
SHISA4Q96DD7 RNU6-895P-201ENST00000384125 103 ntBASIC1.33□□□□□ -2.2
SHISA4Q96DD7 MIR216B-201ENST00000390186 82 ntBASIC1.33□□□□□ -2.2
SHISA4Q96DD7 RNU6-604P-201ENST00000390917 100 ntBASIC1.33□□□□□ -2.2
SHISA4Q96DD7 RNU6-1177P-201ENST00000391058 104 ntBASIC1.33□□□□□ -2.2
SHISA4Q96DD7 RNU6-141P-201ENST00000410499 105 ntBASIC1.33□□□□□ -2.2
SHISA4Q96DD7 AC079150.2-201ENST00000443733 78 ntBASIC1.33□□□□□ -2.2
SHISA4Q96DD7 RNU6-982P-201ENST00000516216 102 ntBASIC1.33□□□□□ -2.2
SHISA4Q96DD7 RNU6-1216P-201ENST00000362590 107 ntBASIC1.32□□□□□ -2.2
SHISA4Q96DD7 Y_RNA.68-201ENST00000362881 102 ntBASIC1.32□□□□□ -2.2
SHISA4Q96DD7 RNA5SP403-201ENST00000363598 108 ntBASIC1.32□□□□□ -2.2
SHISA4Q96DD7 RNA5SP117-201ENST00000365294 118 ntBASIC1.32□□□□□ -2.2
SHISA4Q96DD7 SNORA25-201ENST00000384384 134 ntBASIC1.32□□□□□ -2.2
SHISA4Q96DD7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHISA4Q96DD7 RNU6-382P-201ENST00000365181 106 ntBASIC1.31□□□□□ -2.2
SHISA4Q96DD7 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
SHISA4Q96DD7 AC087343.1-201ENST00000477341 475 ntBASIC1.31□□□□□ -2.2
SHISA4Q96DD7 RNU6-135P-201ENST00000516769 101 ntBASIC1.31□□□□□ -2.2
SHISA4Q96DD7 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
SHISA4Q96DD7 RNU6-829P-201ENST00000363700 112 ntBASIC1.3□□□□□ -2.2
SHISA4Q96DD7 RNU6-1187P-201ENST00000364771 110 ntBASIC1.3□□□□□ -2.2
SHISA4Q96DD7 FABP5P4-201ENST00000437203 171 ntBASIC1.3□□□□□ -2.2
SHISA4Q96DD7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.3□□□□□ -2.2
SHISA4Q96DD7 AC211469.2-201ENST00000605461 205 ntBASIC1.3□□□□□ -2.2
SHISA4Q96DD7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
SHISA4Q96DD7 RNU6-1126P-201ENST00000384002 107 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 Y_RNA.433-201ENST00000384089 102 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SHISA4Q96DD7 RNU7-104P-201ENST00000459398 79 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 RNU6-274P-201ENST00000459566 107 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 AC002350.1-201ENST00000490759 375 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 RNU6-469P-201ENST00000516253 101 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 RNU7-161P-201ENST00000517289 62 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 MIR3920-201ENST00000581751 86 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 MIR8053-201ENST00000613344 75 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 AC067863.3-201ENST00000624172 122 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 AC103706.3-201ENST00000636297 85 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 MIR4773-1-201ENST00000637203 78 ntBASIC1.29□□□□□ -2.2
SHISA4Q96DD7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SHISA4Q96DD7 RNU6-669P-201ENST00000365575 107 ntBASIC1.28□□□□□ -2.2
SHISA4Q96DD7 MIR617-201ENST00000385030 97 ntBASIC1.28□□□□□ -2.2
SHISA4Q96DD7 SNORD89-201ENST00000390981 114 ntBASIC1.28□□□□□ -2.2
SHISA4Q96DD7 RNU6-752P-201ENST00000516376 102 ntBASIC1.28□□□□□ -2.2
SHISA4Q96DD7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
SHISA4Q96DD7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
SHISA4Q96DD7 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
SHISA4Q96DD7 Y_RNA.236-201ENST00000364427 111 ntBASIC1.27□□□□□ -2.21
SHISA4Q96DD7 RNU6-614P-201ENST00000384369 107 ntBASIC1.27□□□□□ -2.21
SHISA4Q96DD7 U7.7-201ENST00000459276 60 ntBASIC1.27□□□□□ -2.21
SHISA4Q96DD7 CYP3A137P-201ENST00000562436 69 ntBASIC1.27□□□□□ -2.21
SHISA4Q96DD7 U6.59-201ENST00000615686 107 ntBASIC1.27□□□□□ -2.21
SHISA4Q96DD7 RNU6-446P-201ENST00000362827 106 ntBASIC1.26□□□□□ -2.21
SHISA4Q96DD7 MIR193B-201ENST00000384907 83 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms