Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RNU6-716P-201ENST00000365621 103 ntBASIC2.11□□□□□ -2.07
PTCD2Q8WV60 Y_RNA.379-201ENST00000365653 102 ntBASIC2.11□□□□□ -2.07
PTCD2Q8WV60 SNORA15B-2-201ENST00000384058 135 ntBASIC2.11□□□□□ -2.07
PTCD2Q8WV60 SNORA15B-1-201ENST00000384334 135 ntBASIC2.11□□□□□ -2.07
PTCD2Q8WV60 RNU4-88P-201ENST00000411220 86 ntBASIC2.11□□□□□ -2.07
PTCD2Q8WV60 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
PTCD2Q8WV60 RNU6-548P-201ENST00000517083 115 ntBASIC2.1□□□□□ -2.07
PTCD2Q8WV60 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
PTCD2Q8WV60 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PTCD2Q8WV60 MIR222-201ENST00000384992 110 ntBASIC2.09□□□□□ -2.07
PTCD2Q8WV60 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PTCD2Q8WV60 MIR676-201ENST00000390702 67 ntBASIC2.09□□□□□ -2.07
PTCD2Q8WV60 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
PTCD2Q8WV60 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
PTCD2Q8WV60 AC008834.1-201ENST00000511612 175 ntBASIC2.09□□□□□ -2.07
PTCD2Q8WV60 RNA5SP458-201ENST00000516188 119 ntBASIC2.09□□□□□ -2.07
PTCD2Q8WV60 RNU7-174P-201ENST00000516248 59 ntBASIC2.09□□□□□ -2.07
PTCD2Q8WV60 U2.7-201ENST00000619197 100 ntBASIC2.09□□□□□ -2.07
PTCD2Q8WV60 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PTCD2Q8WV60 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PTCD2Q8WV60 SNORD114-1-201ENST00000362705 72 ntBASIC2.08□□□□□ -2.08
PTCD2Q8WV60 SNORD12-201ENST00000391002 90 ntBASIC2.08□□□□□ -2.08
PTCD2Q8WV60 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.08□□□□□ -2.08
PTCD2Q8WV60 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
PTCD2Q8WV60 AL353997.5-201ENST00000618886 171 ntBASIC2.08□□□□□ -2.08
PTCD2Q8WV60 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
PTCD2Q8WV60 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
PTCD2Q8WV60 MIR548AD-201ENST00000584780 82 ntBASIC2.07□□□□□ -2.08
PTCD2Q8WV60 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PTCD2Q8WV60 SNORA8.2-201ENST00000384372 139 ntBASIC2.06□□□□□ -2.08
PTCD2Q8WV60 SNORD89-201ENST00000390981 114 ntBASIC2.06□□□□□ -2.08
PTCD2Q8WV60 RNU6-269P-201ENST00000391077 97 ntBASIC2.06□□□□□ -2.08
PTCD2Q8WV60 AL603825.1-201ENST00000438481 80 ntBASIC2.06□□□□□ -2.08
PTCD2Q8WV60 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
PTCD2Q8WV60 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.05□□□□□ -2.08
PTCD2Q8WV60 SNORD18A-201ENST00000363753 72 ntBASIC2.05□□□□□ -2.08
PTCD2Q8WV60 RNA5SP160-201ENST00000364866 120 ntBASIC2.05□□□□□ -2.08
PTCD2Q8WV60 MIR758-201ENST00000390227 88 ntBASIC2.05□□□□□ -2.08
PTCD2Q8WV60 RNU7-119P-201ENST00000459279 63 ntBASIC2.05□□□□□ -2.08
PTCD2Q8WV60 RNA5SP47-201ENST00000517230 109 ntBASIC2.05□□□□□ -2.08
PTCD2Q8WV60 U4.4-201ENST00000620626 117 ntBASIC2.05□□□□□ -2.08
PTCD2Q8WV60 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.05□□□□□ -2.08
PTCD2Q8WV60 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PTCD2Q8WV60 Y_RNA.125-201ENST00000363371 111 ntBASIC2.04□□□□□ -2.08
PTCD2Q8WV60 AL356379.1-201ENST00000414105 126 ntBASIC2.04□□□□□ -2.08
PTCD2Q8WV60 RNU6-753P-201ENST00000363926 107 ntBASIC2.03□□□□□ -2.08
PTCD2Q8WV60 SNORA33.1-201ENST00000364957 130 ntBASIC2.03□□□□□ -2.08
PTCD2Q8WV60 MIR764-201ENST00000390811 85 ntBASIC2.03□□□□□ -2.08
PTCD2Q8WV60 RNA5SP247-201ENST00000411181 105 ntBASIC2.03□□□□□ -2.08
PTCD2Q8WV60 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PTCD2Q8WV60 RNA5SP484-201ENST00000458857 111 ntBASIC2.03□□□□□ -2.08
PTCD2Q8WV60 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PTCD2Q8WV60 SNORD105-201ENST00000386910 85 ntBASIC2.02□□□□□ -2.09
PTCD2Q8WV60 AC002429.1-201ENST00000437672 148 ntBASIC2.02□□□□□ -2.09
PTCD2Q8WV60 RNU6-1110P-201ENST00000516462 101 ntBASIC2.02□□□□□ -2.09
PTCD2Q8WV60 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
PTCD2Q8WV60 AC012493.3-201ENST00000604494 112 ntBASIC2.02□□□□□ -2.09
PTCD2Q8WV60 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.01□□□□□ -2.09
PTCD2Q8WV60 MIR3678-201ENST00000578455 94 ntBASIC2.01□□□□□ -2.09
PTCD2Q8WV60 SNORA63.6-201ENST00000364921 119 ntBASIC2□□□□□ -2.09
PTCD2Q8WV60 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2□□□□□ -2.09
PTCD2Q8WV60 RNU1-92P-201ENST00000517017 135 ntBASIC2□□□□□ -2.09
PTCD2Q8WV60 Y_RNA.246-201ENST00000364495 108 ntBASIC1.99□□□□□ -2.09
PTCD2Q8WV60 Y_RNA.633-201ENST00000459107 95 ntBASIC1.99□□□□□ -2.09
PTCD2Q8WV60 SCARNA17.3-201ENST00000516381 125 ntBASIC1.99□□□□□ -2.09
PTCD2Q8WV60 Y_RNA.407-201ENST00000383986 113 ntBASIC1.98□□□□□ -2.09
PTCD2Q8WV60 FABP5P4-201ENST00000437203 171 ntBASIC1.98□□□□□ -2.09
PTCD2Q8WV60 SCARNA16.5-201ENST00000517114 183 ntBASIC1.98□□□□□ -2.09
PTCD2Q8WV60 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
PTCD2Q8WV60 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.97□□□□□ -2.09
PTCD2Q8WV60 AL096840.1-201ENST00000603287 93 ntBASIC1.97□□□□□ -2.09
PTCD2Q8WV60 MIR652-201ENST00000385278 98 ntBASIC1.96□□□□□ -2.1
PTCD2Q8WV60 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
PTCD2Q8WV60 U7.7-201ENST00000459276 60 ntBASIC1.96□□□□□ -2.1
PTCD2Q8WV60 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
PTCD2Q8WV60 SNORA25.8-201ENST00000364831 128 ntBASIC1.95□□□□□ -2.1
PTCD2Q8WV60 Y_RNA.338-201ENST00000365320 114 ntBASIC1.95□□□□□ -2.1
PTCD2Q8WV60 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
PTCD2Q8WV60 Y_RNA.325-201ENST00000365171 122 ntBASIC1.94□□□□□ -2.1
PTCD2Q8WV60 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
PTCD2Q8WV60 MIR3612-201ENST00000579753 87 ntBASIC1.94□□□□□ -2.1
PTCD2Q8WV60 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
PTCD2Q8WV60 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PTCD2Q8WV60 SNORA41B-201ENST00000384785 128 ntBASIC1.93□□□□□ -2.1
PTCD2Q8WV60 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.93□□□□□ -2.1
PTCD2Q8WV60 MIR6845-201ENST00000613182 61 ntBASIC1.93□□□□□ -2.1
PTCD2Q8WV60 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PTCD2Q8WV60 SNORA9.1-201ENST00000362412 131 ntBASIC1.92□□□□□ -2.1
PTCD2Q8WV60 RNA5SP99-201ENST00000364020 114 ntBASIC1.92□□□□□ -2.1
PTCD2Q8WV60 SNORA25-201ENST00000384384 134 ntBASIC1.92□□□□□ -2.1
PTCD2Q8WV60 MIR517C-201ENST00000385103 95 ntBASIC1.92□□□□□ -2.1
PTCD2Q8WV60 RNU6-231P-201ENST00000517122 103 ntBASIC1.92□□□□□ -2.1
PTCD2Q8WV60 AL162376.1-201ENST00000624117 175 ntBASIC1.92□□□□□ -2.1
PTCD2Q8WV60 AC006210.1-201ENST00000424882 111 ntBASIC1.91□□□□□ -2.1
PTCD2Q8WV60 RNA5SP227-201ENST00000516184 113 ntBASIC1.91□□□□□ -2.1
PTCD2Q8WV60 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
PTCD2Q8WV60 MIR573-201ENST00000384964 99 ntBASIC1.9□□□□□ -2.11
PTCD2Q8WV60 CYP3A54P-201ENST00000566950 75 ntBASIC1.9□□□□□ -2.11
PTCD2Q8WV60 MIR4473-201ENST00000583731 91 ntBASIC1.9□□□□□ -2.11
PTCD2Q8WV60 U6.96-201ENST00000636425 70 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 334 ms