Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORD42.2-201ENST00000365570 69 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU4-61P-201ENST00000411243 107 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-762P-201ENST00000517107 102 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 MIR664B-201ENST00000626756 61 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-973P-201ENST00000364690 107 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-458P-201ENST00000384179 107 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 SNORD116-4-201ENST00000384733 96 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 MTND3P2-201ENST00000438452 342 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 AC026407.1-201ENST00000518369 204 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 U6.58-201ENST00000613107 107 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 MIR6888-201ENST00000621977 67 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 SNORD81.2-201ENST00000365153 76 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 snoU13.17-201ENST00000458802 104 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 MIR4679-2-201ENST00000578358 77 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 SNORD18B-201ENST00000365659 72 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNY4P20-201ENST00000516678 93 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.35□□□□□ -2.46
SYNE1Q8NF91 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.35□□□□□ -2.46
SYNE1Q8NF91 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.35□□□□□ -2.46
SYNE1Q8NF91 RNU6-985P-201ENST00000410182 104 ntBASIC-0.35□□□□□ -2.46
SYNE1Q8NF91 SNORD116-25-201ENST00000516517 92 ntBASIC-0.35□□□□□ -2.46
SYNE1Q8NF91 AC113195.1-201ENST00000579952 141 ntBASIC-0.35□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 MIR203A-201ENST00000384836 110 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 SNORD4B-201ENST00000459083 72 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 RNU6-521P-201ENST00000516663 105 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 AL160413.1-201ENST00000622780 310 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 MIR582-201ENST00000365731 98 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 AL353691.2-201ENST00000443795 59 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 RNU6-240P-201ENST00000516098 97 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 RNU4-69P-201ENST00000410677 143 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 AC108081.1-201ENST00000604358 221 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 AC138305.3-201ENST00000624988 240 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 RNU6-382P-201ENST00000365181 106 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 MIR548AM-201ENST00000584298 74 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 MIR2052-201ENST00000636055 55 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 AL353813.1-201ENST00000440700 253 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 SNORA40.15-201ENST00000516884 107 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 AC021753.1-201ENST00000635724 168 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 MIR6844-201ENST00000637122 62 ntBASIC-0.35□□□□□ -2.47
SYNE1Q8NF91 RNU6-194P-201ENST00000363862 105 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 MIR516A2-201ENST00000384888 90 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 MIR516A1-201ENST00000385033 90 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 SNORA75.5-201ENST00000391291 81 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 RNU6-141P-201ENST00000410499 105 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 RNU6-450P-201ENST00000364654 107 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 RNU6-578P-201ENST00000390980 103 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 RNU5F-1-201ENST00000362507 117 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 SNORA7.5-201ENST00000410672 110 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 SNORD19B-201ENST00000459623 84 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 AC130289.1-201ENST00000577321 73 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 U2.14-201ENST00000615943 113 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 RNU6-228P-201ENST00000362700 106 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 RNU6-400P-201ENST00000391173 106 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 RNU6-972P-201ENST00000391208 107 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.36□□□□□ -2.47
SYNE1Q8NF91 SNORA63.2-201ENST00000362603 126 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-164P-201ENST00000364604 103 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 MIR4756-201ENST00000577874 78 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 MIR3140-201ENST00000583685 90 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 SNORD50.2-201ENST00000365465 70 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 MIR519A2-201ENST00000384990 87 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 MIR4748-201ENST00000578076 82 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 MIR6739-201ENST00000622461 75 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNY3P2-201ENST00000362918 102 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 SNORD115-33-201ENST00000363723 82 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.37□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms