Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.97□□□□□ -2.56
ZIC4Q8N9L1 SNX3P1X-201ENST00000414887 175 ntBASIC-0.97□□□□□ -2.56
ZIC4Q8N9L1 RNU7-85P-201ENST00000458851 63 ntBASIC-0.97□□□□□ -2.56
ZIC4Q8N9L1 RNU6-719P-201ENST00000516671 104 ntBASIC-0.97□□□□□ -2.56
ZIC4Q8N9L1 SNORA81.3-201ENST00000517283 198 ntBASIC-0.97□□□□□ -2.56
ZIC4Q8N9L1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.97□□□□□ -2.56
ZIC4Q8N9L1 AC025521.1-201ENST00000621624 286 ntBASIC-0.97□□□□□ -2.56
ZIC4Q8N9L1 RNU6-495P-201ENST00000362995 107 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 RNU6-915P-201ENST00000364943 103 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 RNU6-460P-201ENST00000391158 108 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 RNU6-111P-201ENST00000517179 105 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 MIR3128-201ENST00000581957 66 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 snoR1.1-201ENST00000628177 80 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 MIR382-201ENST00000637119 76 ntBASIC-0.98□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 SNORD50.2-201ENST00000365465 70 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 SNORA24B-201ENST00000384176 131 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 RNA5SP180-201ENST00000516181 101 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 AC026421.1-201ENST00000519101 163 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 MIR4464-201ENST00000580818 92 ntBASIC-0.99□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.200-201ENST00000364018 102 ntBASIC-1□□□□□ -2.57
ZIC4Q8N9L1 RNU6-990P-201ENST00000364385 104 ntBASIC-1□□□□□ -2.57
ZIC4Q8N9L1 RNU6-132P-201ENST00000383863 107 ntBASIC-1□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1160P-201ENST00000384546 104 ntBASIC-1□□□□□ -2.57
ZIC4Q8N9L1 MIR1263-201ENST00000408324 86 ntBASIC-1□□□□□ -2.57
ZIC4Q8N9L1 FGF7P7-201ENST00000514120 227 ntBASIC-1□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1153P-201ENST00000516760 105 ntBASIC-1□□□□□ -2.57
ZIC4Q8N9L1 AC044792.1-201ENST00000593294 196 ntBASIC-1□□□□□ -2.57
ZIC4Q8N9L1 RNU4-11P-201ENST00000365287 132 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 RNU6-781P-201ENST00000516377 101 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 YWHAEP3-201ENST00000582767 121 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 MIR3140-201ENST00000583685 90 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 AC090617.8-201ENST00000623339 167 ntBASIC-1.01□□□□□ -2.57
ZIC4Q8N9L1 SNORA63.2-201ENST00000362603 126 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 MIR577-201ENST00000385196 96 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 MIR601-201ENST00000385256 79 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 RNU6-816P-201ENST00000390914 107 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 HLA-S-202ENST00000425174 53 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 SNORD18.2-201ENST00000459604 70 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 MIR4536-1-201ENST00000583537 88 ntBASIC-1.02□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.03□□□□□ -2.57
ZIC4Q8N9L1 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.03□□□□□ -2.57
ZIC4Q8N9L1 MIR568-201ENST00000385036 95 ntBASIC-1.03□□□□□ -2.57
ZIC4Q8N9L1 MIR124-2-201ENST00000385081 109 ntBASIC-1.03□□□□□ -2.57
ZIC4Q8N9L1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.03□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.03□□□□□ -2.57
ZIC4Q8N9L1 RNU6-65P-201ENST00000516332 98 ntBASIC-1.03□□□□□ -2.57
ZIC4Q8N9L1 RNU6-158P-201ENST00000517104 100 ntBASIC-1.03□□□□□ -2.57
ZIC4Q8N9L1 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 SNORD114-17-201ENST00000364699 75 ntBASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 SNORA62.4-201ENST00000365504 151 ntBASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 RNU7-24P-201ENST00000458867 62 ntBASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 AL513043.2-201ENST00000573941 143 ntBASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 AC138207.3-201ENST00000585289 166 ntBASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 AC072026.1-201ENST00000605023 201 ntBASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 MIR1246-201ENST00000636535 73 ntBASIC-1.04□□□□□ -2.58
ZIC4Q8N9L1 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.05□□□□□ -2.58
ZIC4Q8N9L1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
ZIC4Q8N9L1 AL158147.1-201ENST00000443970 75 ntBASIC-1.05□□□□□ -2.58
ZIC4Q8N9L1 AC021146.9-201ENST00000512503 156 ntBASIC-1.05□□□□□ -2.58
ZIC4Q8N9L1 MIR3064-201ENST00000581130 66 ntBASIC-1.05□□□□□ -2.58
ZIC4Q8N9L1 AP001340.1-201ENST00000624405 217 ntBASIC-1.05□□□□□ -2.58
ZIC4Q8N9L1 RNU6-208P-201ENST00000362431 107 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 RNY4P6-201ENST00000363667 96 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 SNORD75.2-201ENST00000408784 58 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 MTCYBP9-201ENST00000431021 303 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 AC008737.2-201ENST00000599446 118 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 AC062037.2-201ENST00000610137 73 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 MIR6888-201ENST00000621977 67 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 MIR198-201ENST00000637333 62 ntBASIC-1.06□□□□□ -2.58
ZIC4Q8N9L1 MIR365A-201ENST00000362260 87 ntBASIC-1.07□□□□□ -2.58
ZIC4Q8N9L1 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.07□□□□□ -2.58
ZIC4Q8N9L1 MIR606-201ENST00000384851 96 ntBASIC-1.07□□□□□ -2.58
ZIC4Q8N9L1 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.07□□□□□ -2.58
ZIC4Q8N9L1 MIR1468-201ENST00000410600 86 ntBASIC-1.07□□□□□ -2.58
ZIC4Q8N9L1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.07□□□□□ -2.58
ZIC4Q8N9L1 MIR5591-201ENST00000578248 65 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 278.2 ms