Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.97□□□□□ -2.56
CCDC89Q8N998 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.97□□□□□ -2.56
CCDC89Q8N998 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.97□□□□□ -2.56
CCDC89Q8N998 MTND4LP9-201ENST00000427694 174 ntBASIC-0.97□□□□□ -2.56
CCDC89Q8N998 RNU7-85P-201ENST00000458851 63 ntBASIC-0.97□□□□□ -2.56
CCDC89Q8N998 RNU6-772P-201ENST00000516042 105 ntBASIC-0.97□□□□□ -2.56
CCDC89Q8N998 AL513043.2-201ENST00000573941 143 ntBASIC-0.97□□□□□ -2.56
CCDC89Q8N998 MIR4694-201ENST00000578534 80 ntBASIC-0.97□□□□□ -2.56
CCDC89Q8N998 RNU6-832P-201ENST00000363319 107 ntBASIC-0.98□□□□□ -2.57
CCDC89Q8N998 SNORD50.2-201ENST00000365465 70 ntBASIC-0.98□□□□□ -2.57
CCDC89Q8N998 RPS29P8-201ENST00000445109 171 ntBASIC-0.98□□□□□ -2.57
CCDC89Q8N998 RNU6-182P-201ENST00000516970 105 ntBASIC-0.98□□□□□ -2.57
CCDC89Q8N998 AL353621.2-201ENST00000605340 133 ntBASIC-0.98□□□□□ -2.57
CCDC89Q8N998 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.99□□□□□ -2.57
CCDC89Q8N998 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.99□□□□□ -2.57
CCDC89Q8N998 U3.27-201ENST00000391237 200 ntBASIC-0.99□□□□□ -2.57
CCDC89Q8N998 RNU6-132P-201ENST00000383863 107 ntBASIC-1□□□□□ -2.57
CCDC89Q8N998 Y_RNA.525-201ENST00000384570 113 ntBASIC-1□□□□□ -2.57
CCDC89Q8N998 RNU6-476P-201ENST00000384726 107 ntBASIC-1□□□□□ -2.57
CCDC89Q8N998 RNA5SP451-201ENST00000410588 110 ntBASIC-1□□□□□ -2.57
CCDC89Q8N998 MIR4719-201ENST00000585233 84 ntBASIC-1□□□□□ -2.57
CCDC89Q8N998 MIR6851-201ENST00000617060 67 ntBASIC-1□□□□□ -2.57
CCDC89Q8N998 RNU6-886P-201ENST00000384319 105 ntBASIC-1.01□□□□□ -2.57
CCDC89Q8N998 SNORA40.17-201ENST00000517256 115 ntBASIC-1.01□□□□□ -2.57
CCDC89Q8N998 MIR4493-201ENST00000584016 73 ntBASIC-1.01□□□□□ -2.57
CCDC89Q8N998 MIR5704-201ENST00000584029 77 ntBASIC-1.01□□□□□ -2.57
CCDC89Q8N998 AL157777.2-201ENST00000258070 137 ntBASIC-1.02□□□□□ -2.57
CCDC89Q8N998 RNY3P2-201ENST00000362918 102 ntBASIC-1.02□□□□□ -2.57
CCDC89Q8N998 SNORD114-4-201ENST00000363962 75 ntBASIC-1.02□□□□□ -2.57
CCDC89Q8N998 RNU6-502P-201ENST00000362419 108 ntBASIC-1.03□□□□□ -2.57
CCDC89Q8N998 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.03□□□□□ -2.57
CCDC89Q8N998 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.03□□□□□ -2.57
CCDC89Q8N998 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
CCDC89Q8N998 SNORD75.1-201ENST00000408373 60 ntBASIC-1.03□□□□□ -2.57
CCDC89Q8N998 RNU7-107P-201ENST00000459121 61 ntBASIC-1.03□□□□□ -2.57
CCDC89Q8N998 MIR3140-201ENST00000583685 90 ntBASIC-1.03□□□□□ -2.57
CCDC89Q8N998 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.04□□□□□ -2.58
CCDC89Q8N998 SNORD2-201ENST00000459163 69 ntBASIC-1.04□□□□□ -2.58
CCDC89Q8N998 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.04□□□□□ -2.58
CCDC89Q8N998 AC068339.1-201ENST00000526965 141 ntBASIC-1.04□□□□□ -2.58
CCDC89Q8N998 RNU6-973P-201ENST00000364690 107 ntBASIC-1.05□□□□□ -2.58
CCDC89Q8N998 RNU6-257P-201ENST00000410238 98 ntBASIC-1.05□□□□□ -2.58
CCDC89Q8N998 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.05□□□□□ -2.58
CCDC89Q8N998 MIR4679-2-201ENST00000578358 77 ntBASIC-1.05□□□□□ -2.58
CCDC89Q8N998 AC103810.7-201ENST00000607821 91 ntBASIC-1.06□□□□□ -2.58
CCDC89Q8N998 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.07□□□□□ -2.58
CCDC89Q8N998 SNORA40-201ENST00000388090 126 ntBASIC-1.07□□□□□ -2.58
CCDC89Q8N998 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.07□□□□□ -2.58
CCDC89Q8N998 AC021146.6-201ENST00000514659 117 ntBASIC-1.07□□□□□ -2.58
CCDC89Q8N998 MIR4636-201ENST00000582271 80 ntBASIC-1.07□□□□□ -2.58
CCDC89Q8N998 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.08□□□□□ -2.58
CCDC89Q8N998 MIR548A1-201ENST00000385041 97 ntBASIC-1.08□□□□□ -2.58
CCDC89Q8N998 MIR8068-201ENST00000618032 68 ntBASIC-1.08□□□□□ -2.58
CCDC89Q8N998 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.09□□□□□ -2.58
CCDC89Q8N998 MIR604-201ENST00000384880 94 ntBASIC-1.09□□□□□ -2.58
CCDC89Q8N998 SNORA13-201ENST00000458790 133 ntBASIC-1.09□□□□□ -2.58
CCDC89Q8N998 RNU7-200P-201ENST00000516105 62 ntBASIC-1.09□□□□□ -2.58
CCDC89Q8N998 MIR3064-201ENST00000581130 66 ntBASIC-1.09□□□□□ -2.58
CCDC89Q8N998 MIR548Z-201ENST00000584743 97 ntBASIC-1.09□□□□□ -2.58
CCDC89Q8N998 SNORA63.2-201ENST00000362603 126 ntBASIC-1.1□□□□□ -2.59
CCDC89Q8N998 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.1□□□□□ -2.59
CCDC89Q8N998 SNORD45B-201ENST00000364617 72 ntBASIC-1.1□□□□□ -2.59
CCDC89Q8N998 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.1□□□□□ -2.59
CCDC89Q8N998 RNU6-346P-201ENST00000516288 111 ntBASIC-1.1□□□□□ -2.59
CCDC89Q8N998 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.11□□□□□ -2.59
CCDC89Q8N998 RNU6-721P-201ENST00000410155 105 ntBASIC-1.11□□□□□ -2.59
CCDC89Q8N998 RNU6-971P-201ENST00000516920 106 ntBASIC-1.11□□□□□ -2.59
CCDC89Q8N998 MIR5009-201ENST00000578736 100 ntBASIC-1.11□□□□□ -2.59
CCDC89Q8N998 AC104996.3-201ENST00000590718 94 ntBASIC-1.11□□□□□ -2.59
CCDC89Q8N998 MIR6773-201ENST00000612812 74 ntBASIC-1.11□□□□□ -2.59
CCDC89Q8N998 RNU6-495P-201ENST00000362995 107 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 RNU6-990P-201ENST00000364385 104 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 RNU6-813P-201ENST00000384691 107 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 MIR518B-201ENST00000385127 83 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 MIR548U-201ENST00000390728 81 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 RNU6-644P-201ENST00000391155 98 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 SNORD4B-201ENST00000459083 72 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 SNORD22.1-201ENST00000516331 125 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 MIR3179-1-201ENST00000578940 84 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 MIR3179-2-201ENST00000579107 84 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 MIR3179-3-201ENST00000579566 84 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 MIR4439-201ENST00000583746 80 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 MIR6854-201ENST00000614935 69 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 MIR3179-4-201ENST00000617599 84 ntBASIC-1.12□□□□□ -2.59
CCDC89Q8N998 SNORA63.6-201ENST00000364921 119 ntBASIC-1.13□□□□□ -2.59
CCDC89Q8N998 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.13□□□□□ -2.59
CCDC89Q8N998 SNORD33.1-201ENST00000516213 88 ntBASIC-1.13□□□□□ -2.59
CCDC89Q8N998 SNORA24B-201ENST00000384176 131 ntBASIC-1.14□□□□□ -2.59
CCDC89Q8N998 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.14□□□□□ -2.59
CCDC89Q8N998 SNORD90-201ENST00000391145 111 ntBASIC-1.14□□□□□ -2.59
CCDC89Q8N998 RNU6-337P-201ENST00000391243 106 ntBASIC-1.14□□□□□ -2.59
CCDC89Q8N998 RNU6-795P-201ENST00000516323 103 ntBASIC-1.14□□□□□ -2.59
CCDC89Q8N998 snoR1.1-201ENST00000628177 80 ntBASIC-1.14□□□□□ -2.59
CCDC89Q8N998 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.15□□□□□ -2.59
CCDC89Q8N998 MIR224-201ENST00000384889 81 ntBASIC-1.15□□□□□ -2.59
CCDC89Q8N998 RNA5SP292-201ENST00000390974 118 ntBASIC-1.15□□□□□ -2.59
CCDC89Q8N998 MIR4777-201ENST00000583710 86 ntBASIC-1.15□□□□□ -2.59
CCDC89Q8N998 MIR3914-2-201ENST00000637339 95 ntBASIC-1.15□□□□□ -2.59
CCDC89Q8N998 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.16□□□□□ -2.6
CCDC89Q8N998 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms