Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MIR6718-201ENST00000616153 80 ntBASIC0.1□□□□□ -2.39
RTL3Q8N8U3 Y_RNA.107-201ENST00000363190 121 ntBASIC0.09□□□□□ -2.4
RTL3Q8N8U3 MT-TY-201ENST00000387409 66 ntBASIC0.09□□□□□ -2.4
RTL3Q8N8U3 RNU6-935P-201ENST00000410371 100 ntBASIC0.09□□□□□ -2.4
RTL3Q8N8U3 SNORD4B-201ENST00000459083 72 ntBASIC0.09□□□□□ -2.4
RTL3Q8N8U3 SNORA25.13-201ENST00000516395 103 ntBASIC0.09□□□□□ -2.4
RTL3Q8N8U3 MIR548AI-201ENST00000579940 88 ntBASIC0.09□□□□□ -2.4
RTL3Q8N8U3 MIR4743-201ENST00000584576 69 ntBASIC0.09□□□□□ -2.4
RTL3Q8N8U3 MIR499B-201ENST00000636498 73 ntBASIC0.09□□□□□ -2.4
RTL3Q8N8U3 SNORD114-9-201ENST00000364370 72 ntBASIC0.08□□□□□ -2.4
RTL3Q8N8U3 SNORD20-201ENST00000384550 80 ntBASIC0.08□□□□□ -2.4
RTL3Q8N8U3 Y_RNA.544-201ENST00000384650 113 ntBASIC0.08□□□□□ -2.4
RTL3Q8N8U3 RNU6-109P-201ENST00000516364 107 ntBASIC0.08□□□□□ -2.4
RTL3Q8N8U3 RNU6-184P-201ENST00000516514 107 ntBASIC0.08□□□□□ -2.4
RTL3Q8N8U3 MIR4536-1-201ENST00000583537 88 ntBASIC0.08□□□□□ -2.4
RTL3Q8N8U3 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
RTL3Q8N8U3 SNORD116-10-201ENST00000363791 102 ntBASIC0.07□□□□□ -2.4
RTL3Q8N8U3 MIR216B-201ENST00000390186 82 ntBASIC0.07□□□□□ -2.4
RTL3Q8N8U3 AL031737.1-201ENST00000450125 223 ntBASIC0.07□□□□□ -2.4
RTL3Q8N8U3 RNU7-129P-201ENST00000516128 62 ntBASIC0.07□□□□□ -2.4
RTL3Q8N8U3 RNU6-65P-201ENST00000516332 98 ntBASIC0.07□□□□□ -2.4
RTL3Q8N8U3 RNU6-919P-201ENST00000516731 104 ntBASIC0.07□□□□□ -2.4
RTL3Q8N8U3 MIR3925-201ENST00000584674 77 ntBASIC0.07□□□□□ -2.4
RTL3Q8N8U3 AC104408.1-201ENST00000605241 170 ntBASIC0.07□□□□□ -2.4
RTL3Q8N8U3 Y_RNA.239-201ENST00000364444 113 ntBASIC0.06□□□□□ -2.4
RTL3Q8N8U3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.06□□□□□ -2.4
RTL3Q8N8U3 MIR876-201ENST00000401147 81 ntBASIC0.06□□□□□ -2.4
RTL3Q8N8U3 RNU7-61P-201ENST00000515897 61 ntBASIC0.06□□□□□ -2.4
RTL3Q8N8U3 MIR4460-201ENST00000577862 86 ntBASIC0.06□□□□□ -2.4
RTL3Q8N8U3 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
RTL3Q8N8U3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.06□□□□□ -2.4
RTL3Q8N8U3 MIR548O2-201ENST00000616090 70 ntBASIC0.06□□□□□ -2.4
RTL3Q8N8U3 RNU6-652P-201ENST00000365488 107 ntBASIC0.05□□□□□ -2.4
RTL3Q8N8U3 RNU6-132P-201ENST00000383863 107 ntBASIC0.05□□□□□ -2.4
RTL3Q8N8U3 U3.27-201ENST00000391237 200 ntBASIC0.05□□□□□ -2.4
RTL3Q8N8U3 MTATP8P2-201ENST00000435212 202 ntBASIC0.05□□□□□ -2.4
RTL3Q8N8U3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.05□□□□□ -2.4
RTL3Q8N8U3 RNA5SP285-201ENST00000516619 119 ntBASIC0.05□□□□□ -2.4
RTL3Q8N8U3 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
RTL3Q8N8U3 MIRLET7F1-201ENST00000362202 87 ntBASIC0.04□□□□□ -2.4
RTL3Q8N8U3 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
RTL3Q8N8U3 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
RTL3Q8N8U3 RNU6-519P-201ENST00000410590 108 ntBASIC0.04□□□□□ -2.4
RTL3Q8N8U3 Y_RNA.677-201ENST00000516401 85 ntBASIC0.04□□□□□ -2.4
RTL3Q8N8U3 YWHAEP2-201ENST00000580066 112 ntBASIC0.04□□□□□ -2.4
RTL3Q8N8U3 MIR3064-201ENST00000581130 66 ntBASIC0.04□□□□□ -2.4
RTL3Q8N8U3 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
RTL3Q8N8U3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.04□□□□□ -2.4
RTL3Q8N8U3 MIR450A1-201ENST00000362262 91 ntBASIC0.03□□□□□ -2.4
RTL3Q8N8U3 MIR451A-201ENST00000385059 72 ntBASIC0.03□□□□□ -2.4
RTL3Q8N8U3 MIR643-201ENST00000385267 97 ntBASIC0.03□□□□□ -2.4
RTL3Q8N8U3 AL035461.1-201ENST00000421490 332 ntBASIC0.03□□□□□ -2.4
RTL3Q8N8U3 AC104996.3-201ENST00000590718 94 ntBASIC0.03□□□□□ -2.4
RTL3Q8N8U3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.03□□□□□ -2.4
RTL3Q8N8U3 U7.3-201ENST00000616123 62 ntBASIC0.03□□□□□ -2.4
RTL3Q8N8U3 AP001318.4-201ENST00000616637 121 ntBASIC0.03□□□□□ -2.4
RTL3Q8N8U3 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
RTL3Q8N8U3 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
RTL3Q8N8U3 MIR329-2-201ENST00000385029 84 ntBASIC0.02□□□□□ -2.41
RTL3Q8N8U3 MIR548U-201ENST00000390728 81 ntBASIC0.02□□□□□ -2.41
RTL3Q8N8U3 SNORA75.1-201ENST00000391130 148 ntBASIC0.02□□□□□ -2.41
RTL3Q8N8U3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.02□□□□□ -2.41
RTL3Q8N8U3 MIR2052-201ENST00000636055 55 ntBASIC0.02□□□□□ -2.41
RTL3Q8N8U3 Y_RNA.178-201ENST00000363832 102 ntBASIC0.01□□□□□ -2.41
RTL3Q8N8U3 RNU6-811P-201ENST00000384069 107 ntBASIC0.01□□□□□ -2.41
RTL3Q8N8U3 RNU6-180P-201ENST00000516697 61 ntBASIC0.01□□□□□ -2.41
RTL3Q8N8U3 MIR548AE1-201ENST00000583292 70 ntBASIC0.01□□□□□ -2.41
RTL3Q8N8U3 MIR4473-201ENST00000583731 91 ntBASIC0.01□□□□□ -2.41
RTL3Q8N8U3 SNORA63.4-201ENST00000362763 126 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 Y_RNA.290-201ENST00000364879 114 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 RNU6-147P-201ENST00000383983 107 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 Y_RNA.407-201ENST00000383986 113 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 Y_RNA.491-201ENST00000384417 107 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0□□□□□ -2.41
RTL3Q8N8U3 Y_RNA.660-201ENST00000516002 120 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 RNA5SP395-201ENST00000516567 118 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 RNU5B-6P-201ENST00000516765 68 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 SCARNA11.2-201ENST00000517183 154 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 AC026421.1-201ENST00000519101 163 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 uc_338.10-201ENST00000621872 182 ntBASIC0□□□□□ -2.41
RTL3Q8N8U3 SNORA63.2-201ENST00000362603 126 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 RNU6V-201ENST00000384105 107 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 SNORA24B-201ENST00000384176 131 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 MIR593-201ENST00000384856 100 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 MIR516B1-201ENST00000385211 90 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 RNA5SP292-201ENST00000390974 118 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 RNU7-165P-201ENST00000458864 60 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 AC084368.1-201ENST00000620935 65 ntBASIC-0.01□□□□□ -2.41
RTL3Q8N8U3 SNORD114-5-201ENST00000362928 70 ntBASIC-0.02□□□□□ -2.41
RTL3Q8N8U3 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.02□□□□□ -2.41
RTL3Q8N8U3 RNU6-32P-201ENST00000383948 107 ntBASIC-0.02□□□□□ -2.41
RTL3Q8N8U3 RNU6-44P-201ENST00000384045 107 ntBASIC-0.02□□□□□ -2.41
RTL3Q8N8U3 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.02□□□□□ -2.41
RTL3Q8N8U3 RNU6-13P-201ENST00000384248 107 ntBASIC-0.02□□□□□ -2.41
RTL3Q8N8U3 RNU6-12P-201ENST00000384604 107 ntBASIC-0.02□□□□□ -2.41
RTL3Q8N8U3 RNU6-41P-201ENST00000384741 107 ntBASIC-0.02□□□□□ -2.41
RTL3Q8N8U3 SNORA40.13-201ENST00000516379 120 ntBASIC-0.02□□□□□ -2.41
RTL3Q8N8U3 CR383656.4-201ENST00000546909 122 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 272.6 ms