Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 SNORD58C-201ENST00000365223 64 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 MIR604-201ENST00000384880 94 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 MIR569-201ENST00000385228 96 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 FGF7P7-201ENST00000514120 227 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.04□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.05□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.05□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.05□□□□□ -2.58
CCDC50Q8IVM0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.05□□□□□ -2.58
CCDC50Q8IVM0 RNU6-973P-201ENST00000364690 107 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 U3.27-201ENST00000391237 200 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 RNU7-85P-201ENST00000458851 63 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 RNU6-65P-201ENST00000516332 98 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 MIR4536-1-201ENST00000583537 88 ntBASIC-1.06□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 SNORD50.2-201ENST00000365465 70 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 AL500527.2-201ENST00000454105 95 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 SNORD2-201ENST00000459163 69 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 MIR3144-201ENST00000579460 79 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 MIR8068-201ENST00000618032 68 ntBASIC-1.07□□□□□ -2.58
CCDC50Q8IVM0 SNORD114-25-201ENST00000363742 72 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 SNORD114-4-201ENST00000363962 75 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 RNU6-721P-201ENST00000410155 105 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 AL513043.2-201ENST00000573941 143 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 MIR3613-201ENST00000579844 87 ntBASIC-1.08□□□□□ -2.58
CCDC50Q8IVM0 RNU6-132P-201ENST00000383863 107 ntBASIC-1.09□□□□□ -2.58
CCDC50Q8IVM0 AL035470.1-201ENST00000622571 220 ntBASIC-1.09□□□□□ -2.58
CCDC50Q8IVM0 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.1□□□□□ -2.59
CCDC50Q8IVM0 MTND5P41-201ENST00000517498 206 ntBASIC-1.1□□□□□ -2.59
CCDC50Q8IVM0 MIR4694-201ENST00000578534 80 ntBASIC-1.1□□□□□ -2.59
CCDC50Q8IVM0 MIR4499-201ENST00000584834 69 ntBASIC-1.1□□□□□ -2.59
CCDC50Q8IVM0 RNU6-832P-201ENST00000363319 107 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR518B-201ENST00000385127 83 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 SNORD22.1-201ENST00000516331 125 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 RNU6-426P-201ENST00000516464 97 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3179-1-201ENST00000578940 84 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3179-2-201ENST00000579107 84 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3179-3-201ENST00000579566 84 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3140-201ENST00000583685 90 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 MIR3179-4-201ENST00000617599 84 ntBASIC-1.11□□□□□ -2.59
CCDC50Q8IVM0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.12□□□□□ -2.59
CCDC50Q8IVM0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 MIR6773-201ENST00000612812 74 ntBASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 MIR6854-201ENST00000614935 69 ntBASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 uc_338.19-201ENST00000616808 99 ntBASIC-1.13□□□□□ -2.59
CCDC50Q8IVM0 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.14□□□□□ -2.59
CCDC50Q8IVM0 SNORA13-201ENST00000458790 133 ntBASIC-1.14□□□□□ -2.59
CCDC50Q8IVM0 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.14□□□□□ -2.59
CCDC50Q8IVM0 AC108676.2-201ENST00000605225 163 ntBASIC-1.14□□□□□ -2.59
CCDC50Q8IVM0 RNY3P2-201ENST00000362918 102 ntBASIC-1.15□□□□□ -2.59
CCDC50Q8IVM0 RNU6-274P-201ENST00000459566 107 ntBASIC-1.15□□□□□ -2.59
CCDC50Q8IVM0 RNU6-772P-201ENST00000516042 105 ntBASIC-1.15□□□□□ -2.59
CCDC50Q8IVM0 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.16□□□□□ -2.6
CCDC50Q8IVM0 RNU6-337P-201ENST00000391243 106 ntBASIC-1.16□□□□□ -2.6
CCDC50Q8IVM0 MTND4LP9-201ENST00000427694 174 ntBASIC-1.16□□□□□ -2.6
CCDC50Q8IVM0 RNU6-758P-201ENST00000516292 89 ntBASIC-1.16□□□□□ -2.6
CCDC50Q8IVM0 SNORA63.2-201ENST00000362603 126 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 RNU6-990P-201ENST00000364385 104 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 AC068339.1-201ENST00000526965 141 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 MIR378F-201ENST00000578143 78 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 MIR3064-201ENST00000581130 66 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 snoR1.1-201ENST00000628177 80 ntBASIC-1.17□□□□□ -2.6
CCDC50Q8IVM0 RNU6-495P-201ENST00000362995 107 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 RNA5SP368-201ENST00000364298 116 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 SNORA63.6-201ENST00000364921 119 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 RNU6-905P-201ENST00000384434 107 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 MIR517B-201ENST00000385102 67 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 RNU6-592P-201ENST00000411333 103 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 AP000533.3-201ENST00000447704 118 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 AC103810.7-201ENST00000607821 91 ntBASIC-1.18□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 MIRLET7B-201ENST00000385140 83 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 AC022137.1-201ENST00000483735 151 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 RNA5SP470-201ENST00000516463 106 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 MIR4679-2-201ENST00000578358 77 ntBASIC-1.19□□□□□ -2.6
CCDC50Q8IVM0 AL157777.2-201ENST00000258070 137 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 SCARNA18B-201ENST00000458806 135 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 AC104996.3-201ENST00000590718 94 ntBASIC-1.2□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.21□□□□□ -2.6
CCDC50Q8IVM0 SNORA24B-201ENST00000384176 131 ntBASIC-1.21□□□□□ -2.6
CCDC50Q8IVM0 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms