Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 MIR633-201ENST00000384821 98 ntBASIC1.66□□□□□ -2.14
RETREG3Q86VR2 MIR19B1-201ENST00000384829 87 ntBASIC1.66□□□□□ -2.14
RETREG3Q86VR2 MIR200A-201ENST00000384875 90 ntBASIC1.66□□□□□ -2.14
RETREG3Q86VR2 RNU6-269P-201ENST00000391077 97 ntBASIC1.66□□□□□ -2.14
RETREG3Q86VR2 SNORD124-201ENST00000459577 104 ntBASIC1.66□□□□□ -2.14
RETREG3Q86VR2 RNA5SP432-201ENST00000362480 116 ntBASIC1.65□□□□□ -2.15
RETREG3Q86VR2 SNORD114-4-201ENST00000363962 75 ntBASIC1.65□□□□□ -2.15
RETREG3Q86VR2 RNU6-482P-201ENST00000391068 107 ntBASIC1.65□□□□□ -2.15
RETREG3Q86VR2 SNORA26.9-201ENST00000391322 122 ntBASIC1.65□□□□□ -2.15
RETREG3Q86VR2 RNU5B-6P-201ENST00000516765 68 ntBASIC1.65□□□□□ -2.15
RETREG3Q86VR2 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
RETREG3Q86VR2 SCARNA16.5-201ENST00000517114 183 ntBASIC1.65□□□□□ -2.15
RETREG3Q86VR2 AC015712.3-201ENST00000559380 164 ntBASIC1.65□□□□□ -2.15
RETREG3Q86VR2 AC092634.7-201ENST00000621022 103 ntBASIC1.65□□□□□ -2.15
RETREG3Q86VR2 SNORA8.2-201ENST00000384372 139 ntBASIC1.64□□□□□ -2.15
RETREG3Q86VR2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
RETREG3Q86VR2 SNORA40.17-201ENST00000517256 115 ntBASIC1.63□□□□□ -2.15
RETREG3Q86VR2 AC025627.3-201ENST00000582078 182 ntBASIC1.63□□□□□ -2.15
RETREG3Q86VR2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
RETREG3Q86VR2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.62□□□□□ -2.15
RETREG3Q86VR2 RNA5SP484-201ENST00000458857 111 ntBASIC1.62□□□□□ -2.15
RETREG3Q86VR2 RNU6-656P-201ENST00000516785 107 ntBASIC1.62□□□□□ -2.15
RETREG3Q86VR2 AC018659.1-201ENST00000551083 169 ntBASIC1.62□□□□□ -2.15
RETREG3Q86VR2 MIR4769-201ENST00000584126 77 ntBASIC1.62□□□□□ -2.15
RETREG3Q86VR2 MIR6739-201ENST00000622461 75 ntBASIC1.62□□□□□ -2.15
RETREG3Q86VR2 SNORA25.5-201ENST00000363782 126 ntBASIC1.61□□□□□ -2.15
RETREG3Q86VR2 RNA5SP299-201ENST00000391203 116 ntBASIC1.61□□□□□ -2.15
RETREG3Q86VR2 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
RETREG3Q86VR2 SCARNA21.1-201ENST00000515996 128 ntBASIC1.6□□□□□ -2.15
RETREG3Q86VR2 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
RETREG3Q86VR2 RNA5SP215-201ENST00000363440 122 ntBASIC1.59□□□□□ -2.15
RETREG3Q86VR2 AC079150.2-201ENST00000443733 78 ntBASIC1.59□□□□□ -2.15
RETREG3Q86VR2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.59□□□□□ -2.15
RETREG3Q86VR2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
RETREG3Q86VR2 RNA5SP192-201ENST00000364404 120 ntBASIC1.58□□□□□ -2.16
RETREG3Q86VR2 Y_RNA.250-201ENST00000364542 110 ntBASIC1.58□□□□□ -2.16
RETREG3Q86VR2 RNU6-1162P-201ENST00000384443 104 ntBASIC1.58□□□□□ -2.16
RETREG3Q86VR2 RNA5SP227-201ENST00000516184 113 ntBASIC1.58□□□□□ -2.16
RETREG3Q86VR2 RNU6-1089P-201ENST00000516473 104 ntBASIC1.58□□□□□ -2.16
RETREG3Q86VR2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
RETREG3Q86VR2 RNU6-614P-201ENST00000384369 107 ntBASIC1.57□□□□□ -2.16
RETREG3Q86VR2 MIR764-201ENST00000390811 85 ntBASIC1.57□□□□□ -2.16
RETREG3Q86VR2 MIR6845-201ENST00000613182 61 ntBASIC1.57□□□□□ -2.16
RETREG3Q86VR2 U6.59-201ENST00000615686 107 ntBASIC1.57□□□□□ -2.16
RETREG3Q86VR2 AL162376.1-201ENST00000624117 175 ntBASIC1.57□□□□□ -2.16
RETREG3Q86VR2 SNORD114-24-201ENST00000365029 72 ntBASIC1.56□□□□□ -2.16
RETREG3Q86VR2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RETREG3Q86VR2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.56□□□□□ -2.16
RETREG3Q86VR2 snoU13.13-201ENST00000458842 104 ntBASIC1.56□□□□□ -2.16
RETREG3Q86VR2 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
RETREG3Q86VR2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.56□□□□□ -2.16
RETREG3Q86VR2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
RETREG3Q86VR2 RNU6-940P-201ENST00000363433 104 ntBASIC1.55□□□□□ -2.16
RETREG3Q86VR2 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
RETREG3Q86VR2 MIR548C-201ENST00000384815 97 ntBASIC1.55□□□□□ -2.16
RETREG3Q86VR2 AC011195.1-201ENST00000578177 177 ntBASIC1.55□□□□□ -2.16
RETREG3Q86VR2 MIR548V-201ENST00000584165 80 ntBASIC1.55□□□□□ -2.16
RETREG3Q86VR2 MIR6828-201ENST00000636181 60 ntBASIC1.55□□□□□ -2.16
RETREG3Q86VR2 RNU6-302P-201ENST00000365249 107 ntBASIC1.54□□□□□ -2.16
RETREG3Q86VR2 MIR466-201ENST00000580653 84 ntBASIC1.54□□□□□ -2.16
RETREG3Q86VR2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
RETREG3Q86VR2 MIR18A-201ENST00000362310 71 ntBASIC1.53□□□□□ -2.16
RETREG3Q86VR2 RNA5SP99-201ENST00000364020 114 ntBASIC1.53□□□□□ -2.16
RETREG3Q86VR2 SNORA25.8-201ENST00000364831 128 ntBASIC1.53□□□□□ -2.16
RETREG3Q86VR2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RETREG3Q86VR2 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
RETREG3Q86VR2 SNORD99-201ENST00000408612 74 ntBASIC1.53□□□□□ -2.16
RETREG3Q86VR2 AL157398.1-201ENST00000452981 186 ntBASIC1.53□□□□□ -2.16
RETREG3Q86VR2 AC021146.9-201ENST00000512503 156 ntBASIC1.53□□□□□ -2.16
RETREG3Q86VR2 RNA5SP255-201ENST00000516370 107 ntBASIC1.53□□□□□ -2.16
RETREG3Q86VR2 SNORA25.15-201ENST00000516487 89 ntBASIC1.53□□□□□ -2.16
RETREG3Q86VR2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.53□□□□□ -2.16
RETREG3Q86VR2 MIR521-2-201ENST00000384818 87 ntBASIC1.52□□□□□ -2.17
RETREG3Q86VR2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.52□□□□□ -2.17
RETREG3Q86VR2 MIR8081-201ENST00000611533 95 ntBASIC1.52□□□□□ -2.17
RETREG3Q86VR2 RNU6-1079P-201ENST00000362861 110 ntBASIC1.51□□□□□ -2.17
RETREG3Q86VR2 Y_RNA.407-201ENST00000383986 113 ntBASIC1.51□□□□□ -2.17
RETREG3Q86VR2 AC006210.1-201ENST00000424882 111 ntBASIC1.51□□□□□ -2.17
RETREG3Q86VR2 RNA5SP458-201ENST00000516188 119 ntBASIC1.51□□□□□ -2.17
RETREG3Q86VR2 RNA5SP268-201ENST00000516828 124 ntBASIC1.51□□□□□ -2.17
RETREG3Q86VR2 RNA5SP404-201ENST00000517118 132 ntBASIC1.51□□□□□ -2.17
RETREG3Q86VR2 MIR4255-201ENST00000579351 72 ntBASIC1.51□□□□□ -2.17
RETREG3Q86VR2 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
RETREG3Q86VR2 MIR618-201ENST00000385287 98 ntBASIC1.5□□□□□ -2.17
RETREG3Q86VR2 MIR758-201ENST00000390227 88 ntBASIC1.5□□□□□ -2.17
RETREG3Q86VR2 RNU6-141P-201ENST00000410499 105 ntBASIC1.5□□□□□ -2.17
RETREG3Q86VR2 RNU4-45P-201ENST00000365469 141 ntBASIC1.49□□□□□ -2.17
RETREG3Q86VR2 SCARNA17.3-201ENST00000516381 125 ntBASIC1.49□□□□□ -2.17
RETREG3Q86VR2 MIR4473-201ENST00000583731 91 ntBASIC1.49□□□□□ -2.17
RETREG3Q86VR2 MIR26B-201ENST00000362251 77 ntBASIC1.48□□□□□ -2.17
RETREG3Q86VR2 RNU1-17P-201ENST00000363022 152 ntBASIC1.48□□□□□ -2.17
RETREG3Q86VR2 SNORA36.1-201ENST00000363424 132 ntBASIC1.48□□□□□ -2.17
RETREG3Q86VR2 RNU6-829P-201ENST00000363700 112 ntBASIC1.48□□□□□ -2.17
RETREG3Q86VR2 RNU1-124P-201ENST00000363861 145 ntBASIC1.48□□□□□ -2.17
RETREG3Q86VR2 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
RETREG3Q86VR2 SNORD110-201ENST00000408189 75 ntBASIC1.48□□□□□ -2.17
RETREG3Q86VR2 MIR652-201ENST00000385278 98 ntBASIC1.47□□□□□ -2.17
RETREG3Q86VR2 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
RETREG3Q86VR2 RNU6-92P-201ENST00000605893 104 ntBASIC1.47□□□□□ -2.17
RETREG3Q86VR2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms