Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-154P-201ENST00000384306 106 ntBASIC-0.27□□□□□ -2.45
NUP54Q7Z3B4 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.27□□□□□ -2.45
NUP54Q7Z3B4 MIR548O2-201ENST00000616090 70 ntBASIC-0.27□□□□□ -2.45
NUP54Q7Z3B4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.27□□□□□ -2.45
NUP54Q7Z3B4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.27□□□□□ -2.45
NUP54Q7Z3B4 RNU6-811P-201ENST00000384069 107 ntBASIC-0.28□□□□□ -2.45
NUP54Q7Z3B4 U3.27-201ENST00000391237 200 ntBASIC-0.28□□□□□ -2.45
NUP54Q7Z3B4 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.29□□□□□ -2.46
NUP54Q7Z3B4 MIR329-2-201ENST00000385029 84 ntBASIC-0.29□□□□□ -2.46
NUP54Q7Z3B4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.29□□□□□ -2.46
NUP54Q7Z3B4 AC103810.7-201ENST00000607821 91 ntBASIC-0.29□□□□□ -2.46
NUP54Q7Z3B4 RNA5SP257-201ENST00000363023 116 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 SNORD49B-201ENST00000365172 72 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 MIR451A-201ENST00000385059 72 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 RNU7-85P-201ENST00000458851 63 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 MIR4777-201ENST00000583710 86 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 MIR3666-201ENST00000607845 111 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 AL590491.3-201ENST00000610731 82 ntBASIC-0.3□□□□□ -2.46
NUP54Q7Z3B4 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.31□□□□□ -2.46
NUP54Q7Z3B4 IGLVI-20-201ENST00000519296 130 ntBASIC-0.31□□□□□ -2.46
NUP54Q7Z3B4 AC145423.2-201ENST00000610631 239 ntBASIC-0.31□□□□□ -2.46
NUP54Q7Z3B4 MIR20A-201ENST00000362279 71 ntBASIC-0.32□□□□□ -2.46
NUP54Q7Z3B4 SNORA49-201ENST00000386157 136 ntBASIC-0.32□□□□□ -2.46
NUP54Q7Z3B4 RNU6-904P-201ENST00000516206 101 ntBASIC-0.32□□□□□ -2.46
NUP54Q7Z3B4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
NUP54Q7Z3B4 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.32□□□□□ -2.46
NUP54Q7Z3B4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.32□□□□□ -2.46
NUP54Q7Z3B4 RNA5SP98-201ENST00000363158 137 ntBASIC-0.33□□□□□ -2.46
NUP54Q7Z3B4 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.33□□□□□ -2.46
NUP54Q7Z3B4 RNU6-476P-201ENST00000384726 107 ntBASIC-0.33□□□□□ -2.46
NUP54Q7Z3B4 MIR652-201ENST00000385278 98 ntBASIC-0.33□□□□□ -2.46
NUP54Q7Z3B4 SCARNA23-201ENST00000516060 130 ntBASIC-0.33□□□□□ -2.46
NUP54Q7Z3B4 RNU6-795P-201ENST00000516323 103 ntBASIC-0.33□□□□□ -2.46
NUP54Q7Z3B4 AL365222.1-201ENST00000614661 98 ntBASIC-0.33□□□□□ -2.46
NUP54Q7Z3B4 AC012531.4-201ENST00000616509 177 ntBASIC-0.33□□□□□ -2.46
NUP54Q7Z3B4 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.34□□□□□ -2.46
NUP54Q7Z3B4 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.34□□□□□ -2.46
NUP54Q7Z3B4 SNORD114-31-201ENST00000363219 75 ntBASIC-0.34□□□□□ -2.46
NUP54Q7Z3B4 MIR548U-201ENST00000390728 81 ntBASIC-0.34□□□□□ -2.46
NUP54Q7Z3B4 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.34□□□□□ -2.46
NUP54Q7Z3B4 AC244090.1-201ENST00000441884 93 ntBASIC-0.34□□□□□ -2.46
NUP54Q7Z3B4 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.35□□□□□ -2.47
NUP54Q7Z3B4 MIR4645-201ENST00000583158 77 ntBASIC-0.35□□□□□ -2.47
NUP54Q7Z3B4 MIR548Z-201ENST00000584743 97 ntBASIC-0.35□□□□□ -2.47
NUP54Q7Z3B4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
NUP54Q7Z3B4 MIR9-2-201ENST00000384838 87 ntBASIC-0.36□□□□□ -2.47
NUP54Q7Z3B4 RNU6-972P-201ENST00000391208 107 ntBASIC-0.36□□□□□ -2.47
NUP54Q7Z3B4 MIR1302-5-201ENST00000408164 150 ntBASIC-0.36□□□□□ -2.47
NUP54Q7Z3B4 SNORA19.1-201ENST00000410656 129 ntBASIC-0.36□□□□□ -2.47
NUP54Q7Z3B4 AC096531.1-201ENST00000419107 107 ntBASIC-0.36□□□□□ -2.47
NUP54Q7Z3B4 SNORD4B-201ENST00000459083 72 ntBASIC-0.36□□□□□ -2.47
NUP54Q7Z3B4 RNU6-62P-201ENST00000516526 102 ntBASIC-0.36□□□□□ -2.47
NUP54Q7Z3B4 RNA5SP285-201ENST00000516619 119 ntBASIC-0.36□□□□□ -2.47
NUP54Q7Z3B4 RNU6-834P-201ENST00000362367 110 ntBASIC-0.37□□□□□ -2.47
NUP54Q7Z3B4 MIR582-201ENST00000365731 98 ntBASIC-0.37□□□□□ -2.47
NUP54Q7Z3B4 RNU6-132P-201ENST00000383863 107 ntBASIC-0.37□□□□□ -2.47
NUP54Q7Z3B4 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.37□□□□□ -2.47
NUP54Q7Z3B4 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.37□□□□□ -2.47
NUP54Q7Z3B4 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.37□□□□□ -2.47
NUP54Q7Z3B4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 RNU6-54P-201ENST00000365563 107 ntBASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 RNU6-22P-201ENST00000384355 107 ntBASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 RNU6-519P-201ENST00000410590 108 ntBASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 SNORD42B-201ENST00000458893 67 ntBASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 MIR3064-201ENST00000581130 66 ntBASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 MIR4263-201ENST00000584745 83 ntBASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 MIR8064-201ENST00000612863 90 ntBASIC-0.38□□□□□ -2.47
NUP54Q7Z3B4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.39□□□□□ -2.47
NUP54Q7Z3B4 SNORD114-4-201ENST00000363962 75 ntBASIC-0.39□□□□□ -2.47
NUP54Q7Z3B4 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.39□□□□□ -2.47
NUP54Q7Z3B4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
NUP54Q7Z3B4 RNU6-887P-201ENST00000410660 100 ntBASIC-0.39□□□□□ -2.47
NUP54Q7Z3B4 AC104996.3-201ENST00000590718 94 ntBASIC-0.39□□□□□ -2.47
NUP54Q7Z3B4 MIR4788-201ENST00000639104 80 ntBASIC-0.39□□□□□ -2.47
NUP54Q7Z3B4 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
NUP54Q7Z3B4 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.4□□□□□ -2.47
NUP54Q7Z3B4 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.4□□□□□ -2.47
NUP54Q7Z3B4 MIR548E-201ENST00000408287 88 ntBASIC-0.4□□□□□ -2.47
NUP54Q7Z3B4 FGF7P7-201ENST00000514120 227 ntBASIC-0.4□□□□□ -2.47
NUP54Q7Z3B4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.4□□□□□ -2.47
NUP54Q7Z3B4 RNU6-537P-201ENST00000517277 103 ntBASIC-0.4□□□□□ -2.47
NUP54Q7Z3B4 MIR6759-201ENST00000638110 65 ntBASIC-0.4□□□□□ -2.47
NUP54Q7Z3B4 SNORA63.2-201ENST00000362603 126 ntBASIC-0.41□□□□□ -2.48
NUP54Q7Z3B4 SNORD58A-201ENST00000383875 65 ntBASIC-0.41□□□□□ -2.48
NUP54Q7Z3B4 RNU6-455P-201ENST00000384681 107 ntBASIC-0.41□□□□□ -2.48
NUP54Q7Z3B4 AC097510.1-201ENST00000510945 133 ntBASIC-0.41□□□□□ -2.48
NUP54Q7Z3B4 RNU6-479P-201ENST00000516348 105 ntBASIC-0.41□□□□□ -2.48
NUP54Q7Z3B4 AC132825.6-201ENST00000638861 357 ntBASIC-0.41□□□□□ -2.48
NUP54Q7Z3B4 SNORA24B-201ENST00000384176 131 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 SNORD56B-201ENST00000384713 71 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.42□□□□□ -2.48
NUP54Q7Z3B4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 391.5 ms