Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.4
SYNE3Q6ZMZ3 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
SYNE3Q6ZMZ3 RNU6-756P-201ENST00000383997 107 ntBASIC0.08□□□□□ -2.4
SYNE3Q6ZMZ3 MIR876-201ENST00000401147 81 ntBASIC0.08□□□□□ -2.4
SYNE3Q6ZMZ3 MIR2909-201ENST00000617113 69 ntBASIC0.08□□□□□ -2.4
SYNE3Q6ZMZ3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
SYNE3Q6ZMZ3 Y_RNA.107-201ENST00000363190 121 ntBASIC0.07□□□□□ -2.4
SYNE3Q6ZMZ3 RNU6-215P-201ENST00000365169 102 ntBASIC0.07□□□□□ -2.4
SYNE3Q6ZMZ3 RNU6-652P-201ENST00000365488 107 ntBASIC0.06□□□□□ -2.4
SYNE3Q6ZMZ3 SNORD58A-201ENST00000383875 65 ntBASIC0.06□□□□□ -2.4
SYNE3Q6ZMZ3 MIR610-201ENST00000385139 96 ntBASIC0.06□□□□□ -2.4
SYNE3Q6ZMZ3 MIR892B-201ENST00000401279 77 ntBASIC0.06□□□□□ -2.4
SYNE3Q6ZMZ3 SNORD4B-201ENST00000459083 72 ntBASIC0.06□□□□□ -2.4
SYNE3Q6ZMZ3 RNU6-65P-201ENST00000516332 98 ntBASIC0.06□□□□□ -2.4
SYNE3Q6ZMZ3 MIR3925-201ENST00000584674 77 ntBASIC0.06□□□□□ -2.4
SYNE3Q6ZMZ3 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
SYNE3Q6ZMZ3 RNU6-1290P-201ENST00000362957 109 ntBASIC0.05□□□□□ -2.4
SYNE3Q6ZMZ3 SNORD116-10-201ENST00000363791 102 ntBASIC0.05□□□□□ -2.4
SYNE3Q6ZMZ3 Y_RNA.291-201ENST00000364886 113 ntBASIC0.05□□□□□ -2.4
SYNE3Q6ZMZ3 MIR4460-201ENST00000577862 86 ntBASIC0.05□□□□□ -2.4
SYNE3Q6ZMZ3 MIR4536-1-201ENST00000583537 88 ntBASIC0.05□□□□□ -2.4
SYNE3Q6ZMZ3 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
SYNE3Q6ZMZ3 Y_RNA.239-201ENST00000364444 113 ntBASIC0.04□□□□□ -2.4
SYNE3Q6ZMZ3 Y_RNA.544-201ENST00000384650 113 ntBASIC0.04□□□□□ -2.4
SYNE3Q6ZMZ3 SNORA75.1-201ENST00000391130 148 ntBASIC0.04□□□□□ -2.4
SYNE3Q6ZMZ3 U3.27-201ENST00000391237 200 ntBASIC0.04□□□□□ -2.4
SYNE3Q6ZMZ3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.04□□□□□ -2.4
SYNE3Q6ZMZ3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.04□□□□□ -2.4
SYNE3Q6ZMZ3 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
SYNE3Q6ZMZ3 MIR548O2-201ENST00000616090 70 ntBASIC0.04□□□□□ -2.4
SYNE3Q6ZMZ3 U2.22-201ENST00000636441 106 ntBASIC0.04□□□□□ -2.4
SYNE3Q6ZMZ3 MIR593-201ENST00000384856 100 ntBASIC0.03□□□□□ -2.4
SYNE3Q6ZMZ3 Y_RNA.677-201ENST00000516401 85 ntBASIC0.03□□□□□ -2.4
SYNE3Q6ZMZ3 AL031737.1-201ENST00000450125 223 ntBASIC0.02□□□□□ -2.41
SYNE3Q6ZMZ3 RNU7-61P-201ENST00000515897 61 ntBASIC0.02□□□□□ -2.41
SYNE3Q6ZMZ3 RNU6-109P-201ENST00000516364 107 ntBASIC0.02□□□□□ -2.41
SYNE3Q6ZMZ3 RNU6-184P-201ENST00000516514 107 ntBASIC0.02□□□□□ -2.41
SYNE3Q6ZMZ3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.02□□□□□ -2.41
SYNE3Q6ZMZ3 YWHAEP2-201ENST00000580066 112 ntBASIC0.02□□□□□ -2.41
SYNE3Q6ZMZ3 RNU6-132P-201ENST00000383863 107 ntBASIC0.01□□□□□ -2.41
SYNE3Q6ZMZ3 MIR145-201ENST00000384967 88 ntBASIC0.01□□□□□ -2.41
SYNE3Q6ZMZ3 MIR451A-201ENST00000385059 72 ntBASIC0.01□□□□□ -2.41
SYNE3Q6ZMZ3 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
SYNE3Q6ZMZ3 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
SYNE3Q6ZMZ3 MIR548AI-201ENST00000579940 88 ntBASIC0.01□□□□□ -2.41
SYNE3Q6ZMZ3 MIR3064-201ENST00000581130 66 ntBASIC0.01□□□□□ -2.41
SYNE3Q6ZMZ3 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
SYNE3Q6ZMZ3 MIRLET7F1-201ENST00000362202 87 ntBASIC0□□□□□ -2.41
SYNE3Q6ZMZ3 RNU6-519P-201ENST00000410590 108 ntBASIC0□□□□□ -2.41
SYNE3Q6ZMZ3 RNU6-919P-201ENST00000516731 104 ntBASIC0□□□□□ -2.41
SYNE3Q6ZMZ3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0□□□□□ -2.41
SYNE3Q6ZMZ3 AC104996.3-201ENST00000590718 94 ntBASIC0□□□□□ -2.41
SYNE3Q6ZMZ3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0□□□□□ -2.41
SYNE3Q6ZMZ3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0□□□□□ -2.41
SYNE3Q6ZMZ3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
SYNE3Q6ZMZ3 MIR548U-201ENST00000390728 81 ntBASIC-0.01□□□□□ -2.41
SYNE3Q6ZMZ3 RNU6-180P-201ENST00000516697 61 ntBASIC-0.01□□□□□ -2.41
SYNE3Q6ZMZ3 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.02□□□□□ -2.41
SYNE3Q6ZMZ3 SNORD20-201ENST00000384550 80 ntBASIC-0.02□□□□□ -2.41
SYNE3Q6ZMZ3 MIR106A-201ENST00000384870 81 ntBASIC-0.02□□□□□ -2.41
SYNE3Q6ZMZ3 MTATP8P2-201ENST00000435212 202 ntBASIC-0.02□□□□□ -2.41
SYNE3Q6ZMZ3 RNU7-165P-201ENST00000458864 60 ntBASIC-0.02□□□□□ -2.41
SYNE3Q6ZMZ3 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.02□□□□□ -2.41
SYNE3Q6ZMZ3 MIR548AE1-201ENST00000583292 70 ntBASIC-0.02□□□□□ -2.41
SYNE3Q6ZMZ3 MIR4473-201ENST00000583731 91 ntBASIC-0.02□□□□□ -2.41
SYNE3Q6ZMZ3 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.03□□□□□ -2.41
SYNE3Q6ZMZ3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.03□□□□□ -2.41
SYNE3Q6ZMZ3 MIR2052-201ENST00000636055 55 ntBASIC-0.03□□□□□ -2.41
SYNE3Q6ZMZ3 RNU6-811P-201ENST00000384069 107 ntBASIC-0.04□□□□□ -2.42
SYNE3Q6ZMZ3 MIR516B1-201ENST00000385211 90 ntBASIC-0.04□□□□□ -2.42
SYNE3Q6ZMZ3 RNA5SP285-201ENST00000516619 119 ntBASIC-0.04□□□□□ -2.42
SYNE3Q6ZMZ3 U7.3-201ENST00000616123 62 ntBASIC-0.04□□□□□ -2.42
SYNE3Q6ZMZ3 AC084368.1-201ENST00000620935 65 ntBASIC-0.04□□□□□ -2.42
SYNE3Q6ZMZ3 uc_338.10-201ENST00000621872 182 ntBASIC-0.04□□□□□ -2.42
SYNE3Q6ZMZ3 MIR148A-201ENST00000362215 68 ntBASIC-0.05□□□□□ -2.42
SYNE3Q6ZMZ3 MIR450A1-201ENST00000362262 91 ntBASIC-0.05□□□□□ -2.42
SYNE3Q6ZMZ3 RNU6-929P-201ENST00000384429 107 ntBASIC-0.05□□□□□ -2.42
SYNE3Q6ZMZ3 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.05□□□□□ -2.42
SYNE3Q6ZMZ3 CR383656.4-201ENST00000546909 122 ntBASIC-0.05□□□□□ -2.42
SYNE3Q6ZMZ3 SNORA63.2-201ENST00000362603 126 ntBASIC-0.06□□□□□ -2.42
SYNE3Q6ZMZ3 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
SYNE3Q6ZMZ3 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.06□□□□□ -2.42
SYNE3Q6ZMZ3 MIR329-2-201ENST00000385029 84 ntBASIC-0.06□□□□□ -2.42
SYNE3Q6ZMZ3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
SYNE3Q6ZMZ3 RNU7-159P-201ENST00000459284 62 ntBASIC-0.06□□□□□ -2.42
SYNE3Q6ZMZ3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.06□□□□□ -2.42
SYNE3Q6ZMZ3 AP001318.4-201ENST00000616637 121 ntBASIC-0.06□□□□□ -2.42
SYNE3Q6ZMZ3 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.07□□□□□ -2.42
SYNE3Q6ZMZ3 SNORA24B-201ENST00000384176 131 ntBASIC-0.07□□□□□ -2.42
SYNE3Q6ZMZ3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
SYNE3Q6ZMZ3 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.08□□□□□ -2.42
SYNE3Q6ZMZ3 RNA5SP292-201ENST00000390974 118 ntBASIC-0.08□□□□□ -2.42
SYNE3Q6ZMZ3 AL035461.1-201ENST00000421490 332 ntBASIC-0.08□□□□□ -2.42
SYNE3Q6ZMZ3 SNORD114-29-201ENST00000364819 70 ntBASIC-0.09□□□□□ -2.42
SYNE3Q6ZMZ3 RNU6-154P-201ENST00000384306 106 ntBASIC-0.09□□□□□ -2.42
SYNE3Q6ZMZ3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SYNE3Q6ZMZ3 RNA5SP163-201ENST00000410304 99 ntBASIC-0.09□□□□□ -2.42
SYNE3Q6ZMZ3 RNU7-188P-201ENST00000517063 64 ntBASIC-0.09□□□□□ -2.42
SYNE3Q6ZMZ3 AC026421.1-201ENST00000519101 163 ntBASIC-0.09□□□□□ -2.42
SYNE3Q6ZMZ3 AC104692.1-201ENST00000472406 90 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 202.8 ms